ENSG00000197859


Homo sapiens

Features
Gene ID: ENSG00000197859
  
Biological name :ADAMTSL2
  
Synonyms : ADAMTSL2 / ADAMTS like 2 / Q86TH1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 9
Strand: 1
Band: q34.2
Gene start: 133532164
Gene end: 133575519
  
Corresponding Affymetrix probe sets: 206629_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000376781
Ensembl peptide - ENSP00000346478
Ensembl peptide - ENSP00000376780
NCBI entrez gene - 9719     See in Manteia.
OMIM - 612277
RefSeq - XM_011519242
RefSeq - NM_001145320
RefSeq - NM_014694
RefSeq - XM_005272237
RefSeq - XM_005272238
RefSeq - XM_005272239
RefSeq - XM_011519241
RefSeq Peptide - NP_001138792
RefSeq Peptide - NP_055509
swissprot - Q86TH1
swissprot - B1B0D4
Ensembl - ENSG00000197859
  
Related genetic diseases (OMIM): 231050 - Geleophysic dysplasia 1, 231050
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 adamtsl2ENSDARG00000074033Danio rerio
 ADAMTSL2ENSGALG00000002955Gallus gallus
 Q7TSK7ENSMUSG00000036040Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q9P2N4 / ADAMTS9 / ADAM metallopeptidase with thrombospondin type 1 motif 9ENSG0000016363827
THSD4 / Q6ZMP0 / thrombospondin type 1 domain containing 4ENSG0000018772025
P59510 / ADAMTS20 / ADAM metallopeptidase with thrombospondin type 1 motif 20ENSG0000017315725
Q6UY14 / ADAMTSL4 / ADAMTS like 4ENSG0000014338223
P82987 / ADAMTSL3 / ADAMTS like 3ENSG0000015621822
PAPLN / O95428 / papilin, proteoglycan like sulfated glycoproteinENSG0000010076721
Q8N6G6 / ADAMTSL1 / ADAMTS like 1ENSG0000017803121
Q76LX8 / ADAMTS13 / ADAM metallopeptidase with thrombospondin type 1 motif 13ENSG0000016032319
Q8TE58 / ADAMTS15 / ADAM metallopeptidase with thrombospondin type 1 motif 15ENSG0000016610616
Q9UHI8 / ADAMTS1 / ADAM metallopeptidase with thrombospondin type 1 motif 1ENSG0000015473414
Q9UP79 / ADAMTS8 / ADAM metallopeptidase with thrombospondin type 1 motif 8ENSG0000013491713
Q9UNA0 / ADAMTS5 / ADAM metallopeptidase with thrombospondin type 1 motif 5ENSG0000015473613
O75173 / ADAMTS4 / ADAM metallopeptidase with thrombospondin type 1 motif 4ENSG0000015885911


Protein motifs (from Interpro)
Interpro ID Name
 IPR000884  Thrombospondin type-1 (TSP1) repeat
 IPR010294  ADAM-TS Spacer 1
 IPR010909  PLAC
 IPR036383  Thrombospondin type-1 (TSP1) repeat superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006508 proteolysis IEA
 biological_processGO:0030198 extracellular matrix organization IEA
 biological_processGO:0030512 negative regulation of transforming growth factor beta receptor signaling pathway IMP
 biological_processGO:0060481 lobar bronchus epithelium development IEA
 cellular_componentGO:0005576 extracellular region IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008233 peptidase activity IEA
 molecular_functionGO:0050436 microfibril binding IEA


Pathways (from Reactome)
Pathway description
Defective B3GALTL causes Peters-plus syndrome (PpS)
O-glycosylation of TSR domain-containing proteins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000154 Wide mouth "Abnormally wide mouth." [HPO:curators]
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 HP:0000311 Round face "An unusually round appearance of the face." [HPO:curators]
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 HP:0000319 Flat philtrum 
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 HP:0000343 Long philtrum 
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 HP:0000391 Thickened helices 
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 HP:0000463 Nares, anteverted "Anteriorly-facing nostrils viewed with the head in the Frankfurt horizontal and the eyes of the observer level with the eyes of the subject." [pmid:19152422]
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 HP:0000582 Upslanting palpebral fissures 
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 HP:0000767 Pectus excavatum "A defect of the chest wall characterized by a depression of the sternum, giving the chest ("pectus") a caved-in ("excavatum") appearance." [HPO:curators]
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 HP:0000938 Osteopenia "Osteopenia refers to a reduction in bone mineral density (BMD) below normal peak BMD but not low enough to be classified as osteoporosis. According to the WHO, osteopenia is characterized by a value of BMD more than 1 standard deviation below the young adult mean, but less than 2 standard deviations below this value." [HPO:curators]
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 HP:0001072 Thickened skin 
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 HP:0001239 Wrist contractures 
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001387 Joint stiffness "Joint stiffness is a perceived sensation of tightness in a joint or joints when attempting to move them after a period of inactivity. Joint stiffness typically subsides over time." [HPO:curators]
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 HP:0001620 High pitched voice 
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 HP:0001635 Congestive heart failure "The presence of an abnormality of cardiac function that is responsible for the failure of the heart to pump blood at a rate that is commensurate with the needs of the tissues or a state in which abnormally elevated filling pressures are required for the heart to do so. Heart failure is frequently related to a defect in myocardial contraction." [HPO:curators]
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 HP:0001650 Aortic stenosis "The presence of a stenosis (narrowing) of the aortic valve." [HPO:curators]
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 HP:0001718 Mitral stenosis 
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 HP:0001773 Short, broad feet "Abnormally short and wide feet." [HPO:curators]
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 HP:0001792 Nail hypoplasia "Underdeveloped `fingernails` (FMA:54327) or `toenails` (FMA:54328)." [HPO:probinson]
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 HP:0002240 Hepatomegaly "An abnormal enlargment of the liver." [HPO:curators]
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 HP:0002673 Coxa valga "Coxa valga is a deformity of the hip in which the angle between the femoral shaft and the femoral neck is increased compared to age-adjusted values (about 150 degrees in newborns gradually reducing to 120-130 degrees in adults)." [HPO:curators]
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 HP:0002680 J-shaped sella turcica "A deformity of the sella turcica whereby the sella extends further anterior than normal such that the anterior clinoid process appears to overhang it, giving the appearance of the letter J on imaging of the skull." [HPO:curators]
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 HP:0002777 Tracheal stenosis 
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 HP:0003026 Short long bones 
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 HP:0003090 Small capital femoral epiphyses 
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 HP:0003196 Nasal hypoplasia "Underdevelopment of the `nose` (FMA:46472)." [HPO:probinson]
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 HP:0004279 Hypoplastic hand 
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 HP:0004322 Decreased body height "A height below that which is expected according to age and gender norms. Although there is no universally accepted definition of short stature, many refer to "short stature" as height more than 2 standard deviations below the mean for age and gender (or below the 3rd percentile for age and gender dependent norms)." [HPO:curators]
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 HP:0005041 Small, irregular capital femoral epiphyses 
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 HP:0006161 Short metacarpals with rounded proximal ends 
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 HP:0009473 Joint contractures involving the joints of the hand 
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 HP:0010446 Tricuspid stenosis "A narrowing of the orifice of the tricuspid valve of the heart." [HPO:curators]
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 HP:0100490 Camptodactyly (hands) "Contractures of one ore more joints of the fingers." [HPO:sdoelken]
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 HP:0100679 Lack of skin elasticity 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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