ENSG00000143382


Homo sapiens

Features
Gene ID: ENSG00000143382
  
Biological name :ADAMTSL4
  
Synonyms : ADAMTSL4 / ADAMTS like 4 / Q6UY14
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: 1
Band: q21.2
Gene start: 150549369
Gene end: 150560937
  
Corresponding Affymetrix probe sets: 220578_at (Human Genome U133 Plus 2.0 Array)   226071_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000271643
Ensembl peptide - ENSP00000358034
Ensembl peptide - ENSP00000358035
Ensembl peptide - ENSP00000358037
NCBI entrez gene - 54507     See in Manteia.
OMIM - 610113
RefSeq - XM_017001507
RefSeq - NM_001288607
RefSeq - NM_001288608
RefSeq - NM_019032
RefSeq - NM_025008
RefSeq - XM_011509649
RefSeq - XM_011509650
RefSeq - XM_011509651
RefSeq - XM_011509652
RefSeq - XM_017001506
RefSeq - XM_011509644
RefSeq - XM_011509645
RefSeq - XM_011509648
RefSeq Peptide - NP_001275537
RefSeq Peptide - NP_061905
RefSeq Peptide - NP_079284
RefSeq Peptide - NP_001275536
swissprot - Q6UY14
Ensembl - ENSG00000143382
  
Related genetic diseases (OMIM): 225100 - Ectopia lentis, isolated, autosomal recessive, 225100
  225200 - Ectopia lentis et pupillae, 225200
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ADAMTSL4ENSDARG00000063407Danio rerio
 Q80T21ENSMUSG00000015850Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
THSD4 / Q6ZMP0 / thrombospondin type 1 domain containing 4ENSG0000018772036
PAPLN / O95428 / papilin, proteoglycan like sulfated glycoproteinENSG0000010076722
P59510 / ADAMTS20 / ADAM metallopeptidase with thrombospondin type 1 motif 20ENSG0000017315721
Q86TH1 / ADAMTSL2 / ADAMTS like 2ENSG0000019785920
Q9P2N4 / ADAMTS9 / ADAM metallopeptidase with thrombospondin type 1 motif 9ENSG0000016363820
Q8N6G6 / ADAMTSL1 / ADAMTS like 1ENSG0000017803119
P82987 / ADAMTSL3 / ADAMTS like 3ENSG0000015621819
Q76LX8 / ADAMTS13 / ADAM metallopeptidase with thrombospondin type 1 motif 13ENSG0000016032317
Q8TE58 / ADAMTS15 / ADAM metallopeptidase with thrombospondin type 1 motif 15ENSG0000016610614
Q9UHI8 / ADAMTS1 / ADAM metallopeptidase with thrombospondin type 1 motif 1ENSG0000015473412
Q9UP79 / ADAMTS8 / ADAM metallopeptidase with thrombospondin type 1 motif 8ENSG0000013491712
Q9UNA0 / ADAMTS5 / ADAM metallopeptidase with thrombospondin type 1 motif 5ENSG0000015473611
O75173 / ADAMTS4 / ADAM metallopeptidase with thrombospondin type 1 motif 4ENSG0000015885910


Protein motifs (from Interpro)
Interpro ID Name
 IPR000884  Thrombospondin type-1 (TSP1) repeat
 IPR010294  ADAM-TS Spacer 1
 IPR010909  PLAC
 IPR036383  Thrombospondin type-1 (TSP1) repeat superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002064 epithelial cell development IEA
 biological_processGO:0006508 proteolysis IEA
 biological_processGO:0006915 apoptotic process IEA
 biological_processGO:0030198 extracellular matrix organization IEA
 biological_processGO:0036066 protein O-linked fucosylation TAS
 biological_processGO:0043065 positive regulation of apoptotic process IDA
 cellular_componentGO:0005575 cellular_component ND
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005614 interstitial matrix IEA
 cellular_componentGO:0005615 extracellular space IEA
 cellular_componentGO:0005788 endoplasmic reticulum lumen TAS
 molecular_functionGO:0002020 protease binding IPI
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008233 peptidase activity IEA


Pathways (from Reactome)
Pathway description
Defective B3GALTL causes Peters-plus syndrome (PpS)
O-glycosylation of TSR domain-containing proteins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000272 Malar hypoplasia "Underdeveloped midface region." [HPO:curators]
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 HP:0000303 Mandibular prognathia "Abnormal prominence of the chin related to an abnormally long mandible." [HPO:curators]
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 HP:0000505 Impaired vision 
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 HP:0000518 Cataract "A cataract is an opacity or clouding that develops in the crystalline `lens` (FMA:58241) of the eye or in its `capsule` (FMA:58881)." [HPO:probinson]
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 HP:0000541 Detached retina 
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 HP:0000639 Nystagmus "Rhythmic, involuntary oscillations of one or both eyes related to abnormality in fixation, conjugate gaze, or vestibular mechanisms." [HPO:curators]
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 HP:0000646 Amblyopia "Reduced visual acuity that is uncorrectable by lenses in the absence of detectable anatomic defects in the eye or visual pathways. Ambylopia can result from visual deprivation during the critical period of development of visual abilities which lasts to about the age of 8 years. Thus, ambylopia can result from strabismus, anisometropia, or high hypermetropia in there is a failure to form a focused image in one or both eyes." [HPO:curators]
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 HP:0000822 Hypertension "High blood pressure." [HPO:curators]
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 HP:0001083 Ectopia lentis 
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 HP:0001387 Joint stiffness "Joint stiffness is a perceived sensation of tightness in a joint or joints when attempting to move them after a period of inactivity. Joint stiffness typically subsides over time." [HPO:curators]
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 HP:0009917 Persistent pupillary membrane "The presence of remnants of a fetal membrane that persist as strands of tissue crossing the pupil." [HPO:curators]
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 HP:0009918 Ectopia pupillae "A malposition of the pupil." [HPO:curators]
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 HP:0011003 Severe Myopia 
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 HP:0100543 Cognitive impairment "Abnormality in the process of thought including the ability to process information." [HPO:sdoelken]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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