ENSGALG00000001124


Gallus gallus

Features
Gene ID: ENSGALG00000001124
  
Biological name :LHX2
  
Synonyms : LHX2 / LIM/homeobox protein Lhx2
  
Possible biological names infered from orthology :
  
Species: Gallus gallus
  
Chr. number: 17
Strand: 1
Band:
Gene start: 9699002
Gene end: 9729062
  
Corresponding Affymetrix probe sets: Gga.411.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000001691
Ensembl peptide - ENSGALP00000055784
Ensembl peptide - ENSGALP00000054956
NCBI entrez gene - 395705     See in Manteia.
RefSeq - NM_204889
RefSeq - XM_015279326
RefSeq Peptide - NP_990220
swissprot - E1BXQ7
swissprot - A0A1D5PSA0
swissprot - A0A1D5PPZ9
Ensembl - ENSGALG00000001124
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 lhx2bENSDARG00000031222Danio rerio


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
LHX9 / LIM/homeobox protein Lhx9 / Q9NQ69* / Q9WUH2* / LIM homeobox 9*ENSGALG0000000222370
LHX6 / LIM homeobox 6 / Q9R1R0* / Q9UPM6* / Mus musculus LIM homeobox protein 6 (Lhx6), transcript variant 5, mRNA.*ENSGALG0000000134727
LHX5 / Gallus gallus LIM homeobox 5 (LHX5), mRNA. / P61375* / Q9H2C1* / LIM homeobox 5* / LIM homeobox protein 5*ENSGALG0000000830326
LHX1 / LIM/homeobox protein Lhx1 / P48742* / P63006* / LIM homeobox 1*ENSGALG0000000540925
LHX8 / LIM/homeobox protein Lhx8 / O35652* / Q68G74* / LIM homeobox 8*ENSGALG0000001136924
ISL1 / P50211 / Insulin gene enhancer protein ISL-1 / P61372* / P61371* / ISL LIM homeobox 1* / Insulin enhancer protein ISL-1 *ENSGALG0000001488424
LHX3 / LIM/homeobox protein Lhx3 / Q9UBR4* / P50481* / LIM homeobox 3* / LIM homeobox protein 3*ENSGALG0000000392823
LMX1B / P53413 / LIM/homeobox protein LMX-1.2 / O60663* / LIM homeobox transcription factor 1 beta*ENSGALG0000004058223
LMX1A / LIM homeobox transcription factor 1 alpha / Q8TE12* / Q9JKU8*ENSGALG0000000342423
LHX4 / LIM homeobox 4 / P53776* / Q969G2* / LIM/homeobox protein Lhx4 *ENSGALG0000003658723
ISL2 / ISL LIM homeobox 2 / Q96A47* / Q9CXV0* / Insulin enhancer protein ISL-2 *ENSGALG0000003339116
ENSGALG0000003567915
LMO4 / LIM domain only 4 / P61968* / P61969* / LIM domain transcription factor LMO4 *ENSGALG0000000625215
LMO3 / LIM domain only 3 / Q8BZL8* / Q8TAP4* / Mus musculus LIM domain only 3 (Lmo3), transcript variant 2, mRNA.*ENSGALG0000003635815
LMO2 / LIM domain only 2 / P25791* / P25801* / Rhombotin-2 *ENSGALG0000002989212


Protein motifs (from Interpro)
Interpro ID Name
 IPR001356  Homeobox domain
 IPR001781  Zinc finger, LIM-type
 IPR009057  Homeobox-like domain superfamily
 IPR017970  Homeobox, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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