ENSMUSG00000034616


Mus musculus

Features
Gene ID: ENSMUSG00000034616
  
Biological name :Ssh3
  
Synonyms : Mus musculus slingshot protein phosphatase 3 (Ssh3), transcript variant 2, mRNA. / Q8K330 / Ssh3
  
Possible biological names infered from orthology : Q8TE77 / slingshot protein phosphatase 3
  
Species: Mus musculus
  
Chr. number: 19
Strand: -1
Band: A
Gene start: 4261668
Gene end: 4269172
  
Corresponding Affymetrix probe sets: 10464672 (MoGene1.0st)   1447929_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000047718
Ensembl peptide - ENSMUSP00000109483
NCBI entrez gene - 245857     See in Manteia.
MGI - MGI:2683546
RefSeq - XM_006531750
RefSeq - NM_001356620
RefSeq - NM_198113
RefSeq Peptide - NP_932781
RefSeq Peptide - NP_001343549
swissprot - Q8K330
Ensembl - ENSMUSG00000034616
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 si:ch211-203d1.3ENSDARG00000079591Danio rerio
 SSH3ENSG00000172830Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Ssh1 / Q76I79 / Protein phosphatase Slingshot homolog 1 / Q8WYL5* / slingshot protein phosphatase 1*ENSMUSG0000004212142
Ssh2 / Q5SW75 / Protein phosphatase Slingshot homolog 2 / Q76I76* / slingshot protein phosphatase 2*ENSMUSG0000003792637
Dusp16 / dual specificity phosphatase 16 / Q9BY84*ENSMUSG0000003020315
Dusp8 / O09112 / Dual specificity protein phosphatase 8 / Q13202* / dual specificity phosphatase 8*ENSMUSG0000003788714
Dusp6 / Q9DBB1 / Dual specificity protein phosphatase 6 / Q16828* / dual specificity phosphatase 6*ENSMUSG0000001996013
Dusp7 / Q91Z46 / Dual specificity protein phosphatase 7 / Q16829* / dual specificity phosphatase 7*ENSMUSG0000005371613
Dusp9 / dual specificity phosphatase 9 / Q99956*ENSMUSG0000003138312
Dusp4 / Q8BFV3 / Dual specificity protein phosphatase 4 / Q13115* / dual specificity phosphatase 4*ENSMUSG0000003153012
Dusp5 / dual specificity phosphatase 5 / Q16690*ENSMUSG0000003476512
Dusp1 / P28563 / Dual specificity protein phosphatase 1 / P28562* / dual specificity phosphatase 1*ENSMUSG0000002419012
Dusp10 / Q9ESS0 / Dual specificity protein phosphatase 10 / Q9Y6W6* / dual specificity phosphatase 10*ENSMUSG0000003938411
Dusp2 / Q05922 / Dual specificity protein phosphatase 2 / Q05923* / dual specificity phosphatase 2*ENSMUSG0000002736811


Protein motifs (from Interpro)
Interpro ID Name
 IPR000340  Dual specificity phosphatase, catalytic domain
 IPR000387  Tyrosine specific protein phosphatases domain
 IPR014876  DEK, C-terminal
 IPR016130  Protein-tyrosine phosphatase, active site
 IPR020422  Dual specificity protein phosphatase domain
 IPR024950  Dual specificity phosphatase
 IPR029021  Protein-tyrosine phosphatase-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006470 protein dephosphorylation IEA
 biological_processGO:0008064 regulation of actin polymerization or depolymerization IBA
 biological_processGO:0010591 regulation of lamellipodium assembly IBA
 biological_processGO:0016311 dephosphorylation IEA
 biological_processGO:0035335 peptidyl-tyrosine dephosphorylation IEA
 biological_processGO:0050770 regulation of axonogenesis IBA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IBA
 cellular_componentGO:0005856 cytoskeleton IEA
 molecular_functionGO:0003779 actin binding IBA
 molecular_functionGO:0004721 phosphoprotein phosphatase activity IEA
 molecular_functionGO:0004725 protein tyrosine phosphatase activity IEA
 molecular_functionGO:0008138 protein tyrosine/serine/threonine phosphatase activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0016791 phosphatase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0002169 no phenotype detected "normal, viable and fertile appearance and behavior; indistinguishable from controls" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Meox2tm1(cre)Sor/0,Pcsk5tm2Prat/Pcsk5tm2.1Prat
Genetic Background: involves: 129S1/Sv * 129S4/SvJaeSor * 129X1/SvJ * C57BL/6 * SJL

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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