ENSMUSG00000053291


Mus musculus

Features
Gene ID: ENSMUSG00000053291
  
Biological name :Rab4b
  
Synonyms : Q91ZR1 / Rab4b / RAB4B, member RAS oncogene family
  
Possible biological names infered from orthology : P61018 / RAB4B-EGLN2 / RAB4B-EGLN2 readthrough (NMD candidate)
  
Species: Mus musculus
  
Chr. number: 7
Strand: -1
Band: A3
Gene start: 27168424
Gene end: 27178896
  
Corresponding Affymetrix probe sets: 10561178 (MoGene1.0st)   1451643_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000090727
Ensembl peptide - ENSMUSP00000138477
NCBI entrez gene - 19342     See in Manteia.
MGI - MGI:105071
RefSeq - NM_029391
RefSeq Peptide - NP_083667
swissprot - Q4V9W8
swissprot - Q91ZR1
swissprot - S4R232
Ensembl - ENSMUSG00000053291
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rab4bENSDARG00000012177Danio rerio
 RAB4BENSG00000167578Homo sapiens
 RAB4B-EGLN2ENSG00000171570Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Rab4a / P56371 / Ras-related protein Rab-4A / P20338* / RAB4A, member RAS oncogene family*ENSMUSG0000001947886
Rab14 / Q91V41 / RAB14, member RAS oncogene family / P61106*ENSMUSG0000002687859
Rab2b / P59279 / RAB2B, member RAS oncogene family / Q8WUD1*ENSMUSG0000002215951
Rab2a / P53994 / Ras-related protein Rab-2A / P61019* / RAB2A, member RAS oncogene family*ENSMUSG0000004718751
P46638 / Rab11b / RAB11B, member RAS oncogene family / Q15907*ENSMUSG0000007745045
P62492 / Rab11a / RAB11A, member RAS oncogene family / P62491*ENSMUSG0000000477144
Rab25 / Q9WTL2 / RAB25, member RAS oncogene family / P57735*ENSMUSG0000000860143
Rab39 / Q8BHD0 / RAB39, member RAS oncogene family / Q14964* / RAB39A* / RAB39A, member RAS oncogene family*ENSMUSG0000005506940
Q8BHC1 / Rab39b / RAB39B, member RAS oncogene family / Q96DA2*ENSMUSG0000003120240
Rab18 / P35293 / RAB18, member RAS oncogene family / Q9NP72*ENSMUSG0000007363937
Rab42 / Q0PD08 / Ras-related protein Rab-42 / Q8N4Z0* / RAB42, member RAS oncogene family*ENSMUSG0000008968734


Protein motifs (from Interpro)
Interpro ID Name
 IPR001806  Small GTPase superfamily
 IPR005225  Small GTP-binding protein domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0030100 regulation of endocytosis IBA
 biological_processGO:0046323 glucose import ISO
 cellular_componentGO:0005739 mitochondrion IDA
 cellular_componentGO:0005768 endosome IBA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0032593 insulin-responsive compartment IBA
 cellular_componentGO:0048471 perinuclear region of cytoplasm ISO
 cellular_componentGO:0055037 recycling endosome ISO
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003924 GTPase activity IEA
 molecular_functionGO:0005525 GTP binding IEA


Pathways (from Reactome)
Pathway description
Neutrophil degranulation
RAB geranylgeranylation
MET receptor recycling


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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