ENSMUSG00000089687


Mus musculus

Features
Gene ID: ENSMUSG00000089687
  
Biological name :Rab42
  
Synonyms : Q0PD08 / Rab42 / Ras-related protein Rab-42
  
Possible biological names infered from orthology : Q8N4Z0 / RAB42, member RAS oncogene family
  
Species: Mus musculus
  
Chr. number: 4
Strand: -1
Band: D2.3
Gene start: 132302197
Gene end: 132303385
  
Corresponding Affymetrix probe sets: 10516880 (MoGene1.0st)   1444450_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000047735
NCBI entrez gene - 242681     See in Manteia.
MGI - MGI:2441753
RefSeq - NM_001081651
RefSeq - XM_006538847
RefSeq Peptide - NP_001075120
swissprot - Q0PD08
Ensembl - ENSMUSG00000089687
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CU571310.1ENSDARG00000102580Danio rerio
 ENSGALG00000000994Gallus gallus
 RAB42ENSG00000188060Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Rab39 / Q8BHD0 / RAB39, member RAS oncogene family / Q14964* / RAB39A* / RAB39A, member RAS oncogene family*ENSMUSG0000005506947
Q8BHC1 / Rab39b / RAB39B, member RAS oncogene family / Q96DA2*ENSMUSG0000003120244
Rab2a / P53994 / Ras-related protein Rab-2A / P61019* / RAB2A, member RAS oncogene family*ENSMUSG0000004718736
Rab14 / Q91V41 / RAB14, member RAS oncogene family / P61106*ENSMUSG0000002687835
Rab2b / P59279 / RAB2B, member RAS oncogene family / Q8WUD1*ENSMUSG0000002215935
Rab4b / Q91ZR1 / RAB4B, member RAS oncogene family / P61018* / RAB4B-EGLN2* / RAB4B-EGLN2 readthrough (NMD candidate)*ENSMUSG0000005329134
Rab25 / Q9WTL2 / RAB25, member RAS oncogene family / P57735*ENSMUSG0000000860134
Rab4a / P56371 / Ras-related protein Rab-4A / P20338* / RAB4A, member RAS oncogene family*ENSMUSG0000001947833
P62492 / Rab11a / RAB11A, member RAS oncogene family / P62491*ENSMUSG0000000477132
P46638 / Rab11b / RAB11B, member RAS oncogene family / Q15907*ENSMUSG0000007745031
Rab18 / P35293 / RAB18, member RAS oncogene family / Q9NP72*ENSMUSG0000007363931


Protein motifs (from Interpro)
Interpro ID Name
 IPR001806  Small GTPase superfamily
 IPR005225  Small GTP-binding protein domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005794 Golgi apparatus IBA
 cellular_componentGO:0016020 membrane IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0003924 GTPase activity IEA
 molecular_functionGO:0005525 GTP binding IEA


Pathways (from Reactome)
Pathway description
RAB geranylgeranylation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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