ENSMUSG00000070953


Mus musculus

Features
Gene ID: ENSMUSG00000070953
  
Biological name :Rabepk
  
Synonyms : Q8VCH5 / Rab9 effector protein with kelch motifs / Rabepk
  
Possible biological names infered from orthology : Q7Z6M1
  
Species: Mus musculus
  
Chr. number: 2
Strand: -1
Band: B
Gene start: 34777556
Gene end: 34799912
  
Corresponding Affymetrix probe sets: 10481900 (MoGene1.0st)   1433041_at (Mouse Genome 430 2.0 Array)   1451487_at (Mouse Genome 430 2.0 Array)   1454449_at (Mouse Genome 430 2.0 Array)   1459021_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000113099
Ensembl peptide - ENSMUSP00000108709
Ensembl peptide - ENSMUSP00000120887
Ensembl peptide - ENSMUSP00000122360
Ensembl peptide - ENSMUSP00000122119
Ensembl peptide - ENSMUSP00000037746
NCBI entrez gene - 227746     See in Manteia.
MGI - MGI:2139530
RefSeq - XM_017317453
RefSeq - NM_145522
RefSeq - XM_006497984
RefSeq - XM_006497985
RefSeq - XM_006497986
RefSeq - XM_006497987
RefSeq - XM_006497988
RefSeq - XM_006497989
RefSeq Peptide - NP_663497
swissprot - D6RGR6
swissprot - G8JL41
swissprot - D6RHN6
swissprot - A2AUF7
swissprot - Q8VCH5
swissprot - B0R0S4
Ensembl - ENSMUSG00000070953
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q6GQN7ENSDARG00000112165Danio rerio
 RABEPKENSGALG00000042210Gallus gallus
 Q7Z6M1ENSG00000136933Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Hcfc2 / host cell factor C2 / Q9Y5Z7*ENSMUSG0000002024626
Hcfc1 / Q61191 / Host cell factor 1 HCF N-terminal chain 1 HCF N-terminal chain 2 HCF N-terminal chain 3 HCF N-terminal chain 4 HCF N-terminal chain 5 HCF N-terminal chain 6 HCF C-terminal c...ENSMUSG0000003138624
Klhdc2 / Q4G5Y1 / Kelch domain-containing protein 2 / Q9Y2U9* / kelch domain containing 2*ENSMUSG0000002097821
Klhdc3 / kelch domain containing 3 / Q9BQ90*ENSMUSG0000006357621
Klhdc1 / Q80YG3 / Kelch domain-containing protein 1 / Q8N7A1* / kelch domain containing 1*ENSMUSG0000005189020
Lztr1 / Q9CQ33 / Mus musculus leucine-zipper-like transcriptional regulator, 1 (Lztr1), transcript variant 2, mRNA. / Q8N653* / leucine zipper like transcription regulator 1*ENSMUSG0000002276120
Q6PAR0 / Klhdc10 / Kelch domain-containing protein 10 / Q6PID8* / kelch domain containing 10*ENSMUSG0000002977517


Protein motifs (from Interpro)
Interpro ID Name
 IPR006652  Kelch repeat type 1
 IPR011498  Kelch repeat type 2
 IPR015915  Kelch-type beta propeller
 IPR037293  Galactose oxidase, central domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005768 endosome IEA
 cellular_componentGO:0010008 endosome membrane IEA
 cellular_componentGO:0016020 membrane IEA
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
Retrograde transport at the Trans-Golgi-Network


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSMUSG00000007458 M6pr / P24668 / Cation-dependent mannose-6-phosphate receptor / P20645* / mannose-6-phosphate receptor, cation dependent*  / complex
 ENSMUSG00000028955 Vamp3 / P63024 / vesicle-associated membrane protein 3 / Q15836*  / complex
 ENSMUSG00000079316 Rab9 / Q9R0M6 / RAB9, member RAS oncogene family / RAB9A* / P51151* / RAB9A, member RAS oncogene family*  / complex
 ENSMUSG00000023830 Igf2r / Q07113 / Cation-independent mannose-6-phosphate receptor / P11717* / insulin like growth factor 2 receptor*  / complex






 

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