ENSG00000051523


Homo sapiens

Features
Gene ID: ENSG00000051523
  
Biological name :CYBA
  
Synonyms : CYBA / cytochrome b-245 alpha chain / P13498
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 16
Strand: -1
Band: q24.2
Gene start: 88643283
Gene end: 88651152
  
Corresponding Affymetrix probe sets: 203028_s_at (Human Genome U133 Plus 2.0 Array)   229445_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000457060
Ensembl peptide - ENSP00000455537
Ensembl peptide - ENSP00000456079
Ensembl peptide - ENSP00000261623
Ensembl peptide - ENSP00000454951
Ensembl peptide - ENSP00000455506
NCBI entrez gene - 1535     See in Manteia.
OMIM - 608508
RefSeq - XM_011522905
RefSeq - NM_000101
RefSeq Peptide - NP_000092
swissprot - H3BR52
swissprot - H3BT77
swissprot - H3BPZ7
swissprot - P13498
swissprot - H3BPX1
swissprot - H3BNP7
Ensembl - ENSG00000051523
  
Related genetic diseases (OMIM): 233690 - Chronic granulomatous disease, autosomal, due to deficiency of CYBA, 233690
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 cybaENSDARG00000018283Danio rerio
 CYBAENSGALG00000029367Gallus gallus
 CybaENSMUSG00000006519Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR007732  Cytochrome b558 alpha-subunit


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001666 response to hypoxia IEA
 biological_processGO:0001938 positive regulation of endothelial cell proliferation IEA
 biological_processGO:0002479 antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent TAS
 biological_processGO:0003106 negative regulation of glomerular filtration by angiotensin IEA
 biological_processGO:0006801 superoxide metabolic process IEA
 biological_processGO:0006954 inflammatory response IMP
 biological_processGO:0008217 regulation of blood pressure IEA
 biological_processGO:0014823 response to activity IEA
 biological_processGO:0014895 smooth muscle hypertrophy IEA
 biological_processGO:0017004 cytochrome complex assembly IDA
 biological_processGO:0022900 electron transport chain IEA
 biological_processGO:0030307 positive regulation of cell growth IEA
 biological_processGO:0031667 response to nutrient levels IEA
 biological_processGO:0032755 positive regulation of interleukin-6 production IDA
 biological_processGO:0032760 positive regulation of tumor necrosis factor production IDA
 biological_processGO:0032930 positive regulation of superoxide anion generation IEA
 biological_processGO:0033864 positive regulation of NAD(P)H oxidase activity IEA
 biological_processGO:0034137 positive regulation of toll-like receptor 2 signaling pathway IDA
 biological_processGO:0034599 cellular response to oxidative stress TAS
 biological_processGO:0042493 response to drug IEA
 biological_processGO:0042554 superoxide anion generation IEA
 biological_processGO:0043312 neutrophil degranulation TAS
 biological_processGO:0045087 innate immune response IMP
 biological_processGO:0045454 cell redox homeostasis TAS
 biological_processGO:0045730 respiratory burst IMP
 biological_processGO:0048010 vascular endothelial growth factor receptor signaling pathway TAS
 biological_processGO:0048661 positive regulation of smooth muscle cell proliferation IEA
 biological_processGO:0050665 hydrogen peroxide biosynthetic process IEA
 biological_processGO:0050766 positive regulation of phagocytosis IDA
 biological_processGO:0051279 regulation of release of sequestered calcium ion into cytosol IEA
 biological_processGO:0055114 oxidation-reduction process IMP
 biological_processGO:0070257 positive regulation of mucus secretion IEA
 biological_processGO:0070555 response to interleukin-1 IEA
 biological_processGO:0071230 cellular response to amino acid stimulus IEA
 biological_processGO:0071260 cellular response to mechanical stimulus IEA
 biological_processGO:0071310 cellular response to organic substance IEA
 biological_processGO:0071333 cellular response to glucose stimulus IEA
 biological_processGO:0071356 cellular response to tumor necrosis factor IEA
 biological_processGO:0071407 cellular response to organic cyclic compound IEA
 biological_processGO:0071480 cellular response to gamma radiation IEA
 biological_processGO:0072593 reactive oxygen species metabolic process IEA
 biological_processGO:1900426 positive regulation of defense response to bacterium IDA
 biological_processGO:1903428 positive regulation of reactive oxygen species biosynthetic process IDA
 biological_processGO:1904044 response to aldosterone IEA
 biological_processGO:1904385 cellular response to angiotensin IEA
 biological_processGO:1904845 cellular response to L-glutamine IEA
 cellular_componentGO:0001725 stress fiber IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005768 endosome IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane TAS
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0005925 focal adhesion IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0016324 apical plasma membrane IEA
 cellular_componentGO:0030141 secretory granule TAS
 cellular_componentGO:0030425 dendrite IEA
 cellular_componentGO:0030670 phagocytic vesicle membrane TAS
 cellular_componentGO:0035579 specific granule membrane TAS
 cellular_componentGO:0043020 NADPH oxidase complex IEA
 cellular_componentGO:0043025 neuronal cell body IEA
 cellular_componentGO:0070821 tertiary granule membrane TAS
 cellular_componentGO:0097038 perinuclear endoplasmic reticulum IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0009055 electron transfer activity IDA
 molecular_functionGO:0016175 superoxide-generating NADPH oxidase activity IEA
 molecular_functionGO:0016491 oxidoreductase activity IEA
 molecular_functionGO:0017124 SH3 domain binding IPI
 molecular_functionGO:0020037 heme binding IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0046982 protein heterodimerization activity IPI


Pathways (from Reactome)
Pathway description
ROS, RNS production in phagocytes
Cross-presentation of particulate exogenous antigens (phagosomes)
Detoxification of Reactive Oxygen Species
VEGFA-VEGFR2 Pathway
RHO GTPases Activate NADPH Oxidases
Neutrophil degranulation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000230 Gingivitis 
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 HP:0000246 Sinusitis 
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 HP:0000388 Otitis media 
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 HP:0000964 Eczema "Eczema is a form of dermatitis. The term eczema is broadly applied to a range of persistent skin conditions and can be related to a number of underlying conditions. Manifestations of eczema can include dryness and recurring skin rashes with redness, skin edema, itching and dryness, crusting, flaking, blistering, cracking, oozing, or bleeding." [HPO:curators]
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 HP:0000976 Eczematoid dermatitis 
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 HP:0000992 Photosensitivity "An increased sensitivity of the skin to light. Photosensitivity may result in a rash upon exposure to the sun (which is known as photodermatosis). Photosensitivity can be diagnosed by phototests in which light is shone on small areas of skin." [HPO:curators]
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 HP:0001034 Hyperpigmented macules 
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 HP:0001287 Meningitis 
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 HP:0001744 Splenomegaly "An abnormal enlargement of the spleen." [HPO:curators]
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 HP:0001874 Abnormality of neutrophil 
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 HP:0001945 Fever 
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 HP:0002021 Pyloric stenosis 
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 HP:0002024 Malabsorption 
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 HP:0002205 Recurrent respiratory infections 
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 HP:0002240 Hepatomegaly "An abnormal enlargment of the liver." [HPO:curators]
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 HP:0002575 Tracheoesophageal fistula "An abnormal connection (fistula) between the esophagus and the trachea." [HPO:curators]
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 HP:0002716 Lymphadenopathy 
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 HP:0002723 Absence of bactericidal oxidative respiratory burst in phagocytes 
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 HP:0002724 Aspergillus infections 
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 HP:0002726 Staphylococcus aureus infections 
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 HP:0002740 E. coli infections 
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 HP:0002741 Serratia marcescens infections 
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 HP:0002742 Klebsiella infections 
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 HP:0002754 Osteomyelitis 
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 HP:0002840 Lymphadenitis 
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 HP:0002842 Burkholderia cepacia infections 
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 HP:0002955 Tissue biopsy shows granulomas 
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 HP:0003203 Negative nitroblue tetrazolium (NBT) reduction test 
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 HP:0003206 Decreased activity of NADPH oxidase 
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 HP:0003514 Deficiency or absence of cytochrome b(-245) 
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 HP:0003621 Juvenile onset 
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 HP:0005224 Rectal abscess 
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 HP:0005406 Recurrent bacterial skin infections 
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 HP:0006510 Chronic obstructive pulmonary disease 
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 HP:0006532 Pneumonia, recurrent episodes 
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 HP:0007417 Discoid lupus erythematosus 
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 HP:0100523 Liver abscess "The presence of an `abscess` (MPATH:608) of the `liver` (FMA:7197)." [HPO:probinson]
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 HP:0100533 Inflammatory abnormality of the eye "Inflammation of the eye, parts of the eye or the periorbital region." [HPO:sdoelken]
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 HP:0100658 Cellulitis 
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 HP:0100721 Mediastinal lymphadenopathy 
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 HP:0100806 Sepsis 
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 HP:0200042 skin ulcer "A discontinuity of the skin exhibiting complete loss of the epidermis and often portions of the dermis and even subcutaneous fat." [HPO:SKOEHLER]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000100365 NCF4 / Q15080 / neutrophil cytosolic factor 4  / complex
 ENSG00000128340 RAC2 / P15153 / Rac family small GTPase 2  / reaction / complex
 ENSG00000136238 RAC1 / P63000 / Rac family small GTPase 1  / complex / reaction
 ENSG00000196408 NOXO1 / Q8NFA2 / NADPH oxidase organizer 1  / complex
 ENSG00000074771 NOX3 / Q9HBY0 / NADPH oxidase 3  / complex
 ENSG00000158517 NCF1 / P14598 / neutrophil cytosolic factor 1  / complex
 ENSG00000188747 NOXA1 / Q86UR1 / NADPH oxidase activator 1  / complex
 ENSG00000007952 NOX1 / Q9Y5S8 / NADPH oxidase 1  / complex
 ENSG00000116701 NCF2 / P19878 / neutrophil cytosolic factor 2  / complex
 ENSG00000086991 NOX4 / Q9NPH5 / NADPH oxidase 4  / complex
 ENSG00000165168 CYBB / P04839 / cytochrome b-245 beta chain  / complex






 

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