ENSG00000101266


Homo sapiens

Features
Gene ID: ENSG00000101266
  
Biological name :CSNK2A1
  
Synonyms : casein kinase 2 alpha 1 / CSNK2A1 / P68400
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 20
Strand: -1
Band: p13
Gene start: 472498
Gene end: 543835
  
Corresponding Affymetrix probe sets: 1567014_s_at (Human Genome U133 Plus 2.0 Array)   206075_s_at (Human Genome U133 Plus 2.0 Array)   212072_s_at (Human Genome U133 Plus 2.0 Array)   212073_at (Human Genome U133 Plus 2.0 Array)   212075_s_at (Human Genome U133 Plus 2.0 Array)   239228_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000493474
Ensembl peptide - ENSP00000495248
Ensembl peptide - ENSP00000495387
Ensembl peptide - ENSP00000495414
Ensembl peptide - ENSP00000495422
Ensembl peptide - ENSP00000495439
Ensembl peptide - ENSP00000495902
Ensembl peptide - ENSP00000495912
Ensembl peptide - ENSP00000495942
Ensembl peptide - ENSP00000495998
Ensembl peptide - ENSP00000496115
Ensembl peptide - ENSP00000496146
Ensembl peptide - ENSP00000496152
Ensembl peptide - ENSP00000496232
Ensembl peptide - ENSP00000496569
Ensembl peptide - ENSP00000217244
Ensembl peptide - ENSP00000339247
Ensembl peptide - ENSP00000383076
Ensembl peptide - ENSP00000383086
Ensembl peptide - ENSP00000476486
Ensembl peptide - ENSP00000476547
Ensembl peptide - ENSP00000477147
Ensembl peptide - ENSP00000481572
Ensembl peptide - ENSP00000493643
Ensembl peptide - ENSP00000493697
Ensembl peptide - ENSP00000493704
Ensembl peptide - ENSP00000493791
Ensembl peptide - ENSP00000493931
Ensembl peptide - ENSP00000494038
Ensembl peptide - ENSP00000494288
Ensembl peptide - ENSP00000494370
Ensembl peptide - ENSP00000494445
Ensembl peptide - ENSP00000495079
Ensembl peptide - ENSP00000495139
NCBI entrez gene - 1457     See in Manteia.
OMIM - 115440
RefSeq - NM_177559
RefSeq - NM_001895
RefSeq - NM_177560
RefSeq Peptide - NP_808228
RefSeq Peptide - NP_001886
RefSeq Peptide - NP_808227
swissprot - A0A087WY74
swissprot - V9GY80
swissprot - V9GYW6
swissprot - V9GYA2
swissprot - E7EU96
swissprot - P68400
Ensembl - ENSG00000101266
  
Related genetic diseases (OMIM): 617062 - Okur-Chung neurodevelopmental syndrome, 617062
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 P21868ENSGALG00000006197Gallus gallus
 Q60737ENSMUSG00000074698Mus musculus
 Q60737ENSMUSG00000101523Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q8NEV1 / CSNK2A3 / casein kinase 2 alpha 3ENSG0000025459898
P19784 / CSNK2A2 / casein kinase 2 alpha 2ENSG0000007077073


Protein motifs (from Interpro)
Interpro ID Name
 IPR000719  Protein kinase domain
 IPR001245  Serine-threonine/tyrosine-protein kinase, catalytic domain
 IPR008271  Serine/threonine-protein kinase, active site
 IPR011009  Protein kinase-like domain superfamily
 IPR017441  Protein kinase, ATP binding site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006457 protein folding TAS
 biological_processGO:0006468 protein phosphorylation IEA
 biological_processGO:0006656 phosphatidylcholine biosynthetic process TAS
 biological_processGO:0006915 apoptotic process IEA
 biological_processGO:0007049 cell cycle IEA
 biological_processGO:0007165 signal transduction TAS
 biological_processGO:0008284 positive regulation of cell proliferation IDA
 biological_processGO:0016055 Wnt signaling pathway IEA
 biological_processGO:0016236 macroautophagy TAS
 biological_processGO:0016310 phosphorylation IEA
 biological_processGO:0018107 peptidyl-threonine phosphorylation IDA
 biological_processGO:0030177 positive regulation of Wnt signaling pathway IMP
 biological_processGO:0030307 positive regulation of cell growth IDA
 biological_processGO:0043154 negative regulation of cysteine-type endopeptidase activity involved in apoptotic process IMP
 biological_processGO:0045732 positive regulation of protein catabolic process IDA
 biological_processGO:0048511 rhythmic process IEA
 biological_processGO:0061077 chaperone-mediated protein folding TAS
 biological_processGO:1901796 regulation of signal transduction by p53 class mediator TAS
 biological_processGO:1905818 regulation of chromosome separation IMP
 cellular_componentGO:0005634 nucleus TAS
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0005956 protein kinase CK2 complex IDA
 cellular_componentGO:0016580 Sin3 complex IDA
 cellular_componentGO:0016581 NuRD complex IDA
 cellular_componentGO:0031519 PcG protein complex IDA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0004672 protein kinase activity IEA
 molecular_functionGO:0004674 protein serine/threonine kinase activity IMP
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016301 kinase activity IDA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0042802 identical protein binding IPI
 molecular_functionGO:0047485 protein N-terminus binding IPI
 molecular_functionGO:0051879 Hsp90 protein binding TAS


Pathways (from Reactome)
Pathway description
Synthesis of PC
WNT mediated activation of DVL
Condensation of Prometaphase Chromosomes
Signal transduction by L1
Regulation of TP53 Activity through Phosphorylation
Cooperation of PDCL (PhLP1) and TRiC/CCT in G-protein beta folding
Receptor Mediated Mitophagy
RUNX1 interacts with co-factors whose precise effect on RUNX1 targets is not known
Regulation of PTEN stability and activity


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000218 High palate "Height of the palate more than 2 SD above the mean (objective) or palatal height at the level of the first permanent molar more than twice the height of the teeth (subjective)." [pmid:19125428]
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 HP:0000219 Thin upper lip 
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 HP:0000252 Microcephaly "Microcephaly is a neurodevelopmental disorder in which the circumference of the head is more than two standard deviations smaller than the age- and gender-dependent norm." [HPO:curators]
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 HP:0000286 Epicanthus "An epicanthal fold is a semilunar fold of skin that extends from the upper eyelid across the medial canthal area to the lower eyelid." [HPO:curators]
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 HP:0000316 Hypertelorism 
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 HP:0000347 Mandibular hypoplasia "Underdevelopment of the mandible." [HPO:curators]
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 HP:0000369 Low-set ears "Low-set ears are defined to be set below an arbitrary line drawn between the lateral canthus of the eye and the occipital protruberance." [HPO:curators]
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 HP:0000431 Broad nasal bridge "Increased horizontal dimension of the upper, bony part of the nose." [HPO:curators]
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 HP:0000463 Nares, anteverted "Anteriorly-facing nostrils viewed with the head in the Frankfurt horizontal and the eyes of the observer level with the eyes of the subject." [pmid:19152422]
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 HP:0000508 Ptosis "Drooping of the eyelid." [HPO:curators]
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 HP:0000664 Synophrys "Fusion of the left and right `eyebrow` (FMA:54237)." [HPO:probinson]
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 HP:0000750 Impaired language development 
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 HP:0001156 Brachydactyly 
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 HP:0001249 Mental retardation 
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
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 HP:0001302 Pachygyria "A congenital abnormality of the cerebral hemisphere chacterized by unusually thick gyrations (convolutions) of the cerebral cortex." [HPO:curators]
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 HP:0001382 Joint hypermobility "The ability of a joint to move beyond its normal range of motion." [HPO:curators]
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 HP:0001508 Failure to thrive 
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 HP:0002019 Constipation 
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 HP:0002553 Arched eyebrows 
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 HP:0002650 Scoliosis "The presence of an abnormal lateral curvature of the spine." [HPO:curators]
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 HP:0002720 Decreased IgA 
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 HP:0003812 Phenotypic variability 
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 HP:0004315 Decreased IgG level "An abnormally decreased level of immunoglobulin G in blood." [HPO:probinson]
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 HP:0007018 Attention deficit hyperactivity disorder "Attention deficit hyperactivity disorder (ADHD) manifests at age 2-3 years or by first grade at the latest. The main symptoms are distractibility, impulsivity, hyperactivity, and often trouble organizing tasks and projects, difficulty going to sleep, and social problems from being aggressive, loud, or impatient." [HPO:curators]
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 HP:0009879 Cortical gyral simplification "An abnormal reduction of the number and complexity of the pattern of gyrations of the cerebral cortex." [HPO:curators]
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 HP:0010819 Atonic seizures "A type of `seizure` (HP:0001250) characterized by a suddenloss of musle tone. Usually, consciousness is retained. In an atonic seizure, the eyelids may droop, the head may nod, and the person may drop things and fall to the ground." [HPO:probinson]
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 HP:0011968 Feeding difficulties "Impaired ability to eat related to problems gathering food and getting ready to suck, chew, or swallow it." [ISCA:eriggs]
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 HP:0030084 Clinodactyly "An angulation of a digit at an interphalangeal joint in the plane of the palm (finger) or sole (toe)." [pmid:16252026]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000092201 Q9Y5B9 / SUPT16H / SPT16 homolog, facilitates chromatin remodeling subunit  / reaction / complex
 ENSG00000204435 CSNK2B / P67870 / casein kinase 2 beta  / complex
 ENSG00000107404 DVL1 / O14640 / dishevelled segment polarity protein 1  / reaction
 ENSG00000161202 DVL3 / Q92997 / dishevelled segment polarity protein 3  / reaction
 ENSG00000214530 Q9Y365 / STARD10 / StAR related lipid transfer domain containing 10  / reaction
 ENSG00000198910 L1CAM / P32004 / L1 cell adhesion molecule  / reaction / complex
 ENSG00000101266 P68400 / CSNK2A1 / casein kinase 2 alpha 1  / complex
 ENSG00000004975 DVL2 / O14641 / dishevelled segment polarity protein 2  / reaction
 ENSG00000136940 PDCL / Q13371 / phosducin like  / reaction
 ENSG00000069509 FUNDC1 / Q8IVP5 / FUN14 domain containing 1  / reaction
 ENSG00000141510 TP53 / P04637 / tumor protein p53  / reaction
 ENSG00000171862 PTEN / P60484 / phosphatase and tensin homolog  / reaction
 ENSG00000070770 P19784 / CSNK2A2 / casein kinase 2 alpha 2  / complex
 ENSG00000149136 SSRP1 / Q08945 / structure specific recognition protein 1  / reaction / complex






 

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