ENSG00000110435


Homo sapiens

Features
Gene ID: ENSG00000110435
  
Biological name :PDHX
  
Synonyms : O00330 / PDHX / pyruvate dehydrogenase complex component X
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 11
Strand: 1
Band: p13
Gene start: 34915829
Gene end: 35020591
  
Corresponding Affymetrix probe sets: 203067_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000432277
Ensembl peptide - ENSP00000415695
Ensembl peptide - ENSP00000433204
Ensembl peptide - ENSP00000431281
Ensembl peptide - ENSP00000227868
Ensembl peptide - ENSP00000389404
NCBI entrez gene - 8050     See in Manteia.
OMIM - 608769
RefSeq - XM_011520390
RefSeq - NM_001135024
RefSeq - NM_001166158
RefSeq - NM_003477
RefSeq Peptide - NP_001159630
RefSeq Peptide - NP_001128496
RefSeq Peptide - NP_003468
swissprot - O00330
swissprot - E9PLU0
swissprot - E9PRI6
swissprot - H0YD97
Ensembl - ENSG00000110435
  
Related genetic diseases (OMIM): 245349 - Lacticacidemia due to PDX1 deficiency, 245349
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pdhxENSDARG00000051756Danio rerio
 PDHXENSGALG00000033753Gallus gallus
 PdhxENSMUSG00000010914Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
DLAT / P10515 / dihydrolipoamide S-acetyltransferaseENSG0000015076835


Protein motifs (from Interpro)
Interpro ID Name
 IPR000089  Biotin/lipoyl attachment
 IPR001078  2-oxoacid dehydrogenase acyltransferase, catalytic domain
 IPR003016  2-oxo acid dehydrogenase, lipoyl-binding site
 IPR004167  Peripheral subunit-binding domain
 IPR011053  Single hybrid motif
 IPR036625  E3-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006090 pyruvate metabolic process TAS
 biological_processGO:0008152 metabolic process IEA
 biological_processGO:0010510 regulation of acetyl-CoA biosynthetic process from pyruvate TAS
 biological_processGO:0034641 cellular nitrogen compound metabolic process TAS
 biological_processGO:0061732 mitochondrial acetyl-CoA biosynthetic process from pyruvate IC
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005759 mitochondrial matrix TAS
 cellular_componentGO:0045254 pyruvate dehydrogenase complex IDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0016746 transferase activity, transferring acyl groups IEA
 molecular_functionGO:0034604 pyruvate dehydrogenase (NAD+) activity IDA


Pathways (from Reactome)
Pathway description
Regulation of pyruvate dehydrogenase (PDH) complex
Glyoxylate metabolism and glycine degradation
Signaling by Retinoic Acid
Pyruvate metabolism


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
Show

 HP:0000218 High palate "Height of the palate more than 2 SD above the mean (objective) or palatal height at the level of the first permanent molar more than twice the height of the teeth (subjective)." [pmid:19125428]
Show

 HP:0000243 Trigonocephaly 
Show

 HP:0000252 Microcephaly "Microcephaly is a neurodevelopmental disorder in which the circumference of the head is more than two standard deviations smaller than the age- and gender-dependent norm." [HPO:curators]
Show

 HP:0000286 Epicanthus "An epicanthal fold is a semilunar fold of skin that extends from the upper eyelid across the medial canthal area to the lower eyelid." [HPO:curators]
Show

 HP:0000316 Hypertelorism 
Show

 HP:0000496 Abnormality of eye movement "An abnormality in voluntary or involuntary eye movements or their control." [HPO:probinson]
Show

 HP:0000648 Optic atrophy 
Show

 HP:0000767 Pectus excavatum "A defect of the chest wall characterized by a depression of the sternum, giving the chest ("pectus") a caved-in ("excavatum") appearance." [HPO:curators]
Show

 HP:0001249 Mental retardation 
Show

 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
Show

 HP:0001251 Ataxia "Ataxia is a nonspecific neurological sign and symptom consisting of gross lack of coordination of muscle movements. Ataxia is caused by dysfunction of one or more parts of the nervous system including the cerebellum, the sensory nervous system, the vestibular system, or the cerebral cortex." [HPO:curators]
Show

 HP:0001258 Spastic paraplegia 
Show

 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
Show

 HP:0001319 Neonatal hypotonia "Muscular hypotonia (abnormally low muscle tone) manifesting in the neonatal period." [HPO:curators]
Show

 HP:0001332 Dystonia "An abnormally increased muscular tone that causes fixed abnormal postures. There is a slow, intermittent twisting motion that leads to exaggerated turning and posture of the extremities and trunk." [HPO:curators]
Show

 HP:0001338 Partial agenesis of the corpus callosum "A partial failure of the development of the corpus callosum." [HPO:curators]
Show

 HP:0001942 Metabolic acidosis 
Show

 HP:0002317 Unsteady gait 
Show

 HP:0002416 Subependymal cysts 
Show

 HP:0002510 Spastic tetraplegia "Spastic paralysis affecting all four limbs." [HPO:curators]
Show

 HP:0002928 Decreased activity of the pyruvate dehydrogenase (PDH) complex 
Show

 HP:0003128 Lactic acidemia "An abnormal buildup of `lactic acid` (CHEBI:28358) in the body, leading to `acidification` (GO:0045851) of the blood." [HPO:probinson]
Show

 HP:0003348 Hyperalaninemia 
Show

 HP:0003542 Increased serum pyruvate "An abnormal increase in the concentration of pyruvate in the blood. Pyruvate is involved in energy metabolism, forming part of glycolysis and the citric acid cycle." [HPO:curators]
Show

 HP:0003577 Onset at birth 
Show

 HP:0003828 Variable expressivity 
Show

 HP:0007010 Poor fine motor coordination 
Show

 HP:0007015 Poor fine and gross motor coordination 
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000004799 PDK4 / Q16654 / pyruvate dehydrogenase kinase 4  / reaction
 ENSG00000005882 PDK2 / Q15119 / pyruvate dehydrogenase kinase 2  / reaction
 ENSG00000110435 PDHX / O00330 / pyruvate dehydrogenase complex component X  / complex
 ENSG00000091140 DLD / P09622 / dihydrolipoamide dehydrogenase  / complex
 ENSG00000150768 DLAT / P10515 / dihydrolipoamide S-acetyltransferase  / complex
 ENSG00000140905 GCSH / P23434 / glycine cleavage system protein H  / reaction
 ENSG00000168291 PDHB / P11177 / pyruvate dehydrogenase E1 beta subunit  / complex
 ENSG00000131828 PDHA1 / P08559 / pyruvate dehydrogenase E1 alpha 1 subunit  / complex
 ENSG00000163114 PDHA2 / P29803 / pyruvate dehydrogenase E1 alpha 2 subunit  / complex
 ENSG00000152256 PDK1 / Q15118 / pyruvate dehydrogenase kinase 1  / reaction
 ENSG00000067992 PDK3 / Q15120 / pyruvate dehydrogenase kinase 3  / reaction






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   


© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr