ENSG00000091140


Homo sapiens

Features
Gene ID: ENSG00000091140
  
Biological name :DLD
  
Synonyms : dihydrolipoamide dehydrogenase / DLD / P09622
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 7
Strand: 1
Band: q31.1
Gene start: 107890970
Gene end: 107931730
  
Corresponding Affymetrix probe sets: 209095_at (Human Genome U133 Plus 2.0 Array)   230426_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000390667
Ensembl peptide - ENSP00000492159
Ensembl peptide - ENSP00000417016
Ensembl peptide - ENSP00000409590
Ensembl peptide - ENSP00000402593
Ensembl peptide - ENSP00000205402
Ensembl peptide - ENSP00000387542
Ensembl peptide - ENSP00000388077
NCBI entrez gene - 1738     See in Manteia.
OMIM - 238331
RefSeq - NM_001289752
RefSeq - NM_001289751
RefSeq - NM_000108
RefSeq - NM_001289750
RefSeq Peptide - NP_001276681
RefSeq Peptide - NP_000099
RefSeq Peptide - NP_001276679
RefSeq Peptide - NP_001276680
swissprot - P09622
swissprot - A0A1W2PR83
swissprot - A0A024R713
swissprot - F2Z2E3
swissprot - F8WDM5
swissprot - F8WDY5
swissprot - E9PEX6
Ensembl - ENSG00000091140
  
Related genetic diseases (OMIM): 246900 - Dihydrolipoamide dehydrogenase deficiency, 246900
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 dldhENSDARG00000008785Danio rerio
 DLDENSGALG00000007931Gallus gallus
 DldENSMUSG00000020664Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001100  Pyridine nucleotide-disulphide oxidoreductase, class I
 IPR004099  Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
 IPR006258  Dihydrolipoamide dehydrogenase
 IPR012999  Pyridine nucleotide-disulphide oxidoreductase, class I, active site
 IPR016156  FAD/NAD-linked reductase, dimerisation domain superfamily
 IPR023753  FAD/NAD(P)-binding domain
 IPR036188  FAD/NAD(P)-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006086 acetyl-CoA biosynthetic process from pyruvate IEA
 biological_processGO:0006090 pyruvate metabolic process TAS
 biological_processGO:0006099 tricarboxylic acid cycle TAS
 biological_processGO:0006103 2-oxoglutarate metabolic process IEA
 biological_processGO:0006120 mitochondrial electron transport, NADH to ubiquinone IEA
 biological_processGO:0006508 proteolysis IEA
 biological_processGO:0006554 lysine catabolic process TAS
 biological_processGO:0007369 gastrulation IEA
 biological_processGO:0007568 aging IEA
 biological_processGO:0009083 branched-chain amino acid catabolic process TAS
 biological_processGO:0009106 lipoate metabolic process IEA
 biological_processGO:0010510 regulation of acetyl-CoA biosynthetic process from pyruvate TAS
 biological_processGO:0022900 electron transport chain IEA
 biological_processGO:0034641 cellular nitrogen compound metabolic process TAS
 biological_processGO:0042391 regulation of membrane potential IEA
 biological_processGO:0045454 cell redox homeostasis IEA
 biological_processGO:0048240 sperm capacitation IEA
 biological_processGO:0051068 dihydrolipoamide metabolic process IEA
 biological_processGO:0055114 oxidation-reduction process IEA
 biological_processGO:0061732 mitochondrial acetyl-CoA biosynthetic process from pyruvate IC
 biological_processGO:0106077 histone succinylation IDA
 cellular_componentGO:0001669 acrosomal vesicle IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005739 mitochondrion TAS
 cellular_componentGO:0005759 mitochondrial matrix TAS
 cellular_componentGO:0005929 cilium IEA
 cellular_componentGO:0031410 cytoplasmic vesicle IEA
 cellular_componentGO:0031514 motile cilium IEA
 cellular_componentGO:0042995 cell projection IEA
 cellular_componentGO:0043159 acrosomal matrix IEA
 cellular_componentGO:0043209 myelin sheath IEA
 cellular_componentGO:0045252 oxoglutarate dehydrogenase complex IDA
 cellular_componentGO:0045254 pyruvate dehydrogenase complex IDA
 molecular_functionGO:0004148 dihydrolipoyl dehydrogenase activity TAS
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0009055 electron transfer activity IEA
 molecular_functionGO:0016491 oxidoreductase activity IEA
 molecular_functionGO:0016668 oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor IEA
 molecular_functionGO:0034604 pyruvate dehydrogenase (NAD+) activity IDA
 molecular_functionGO:0043544 lipoamide binding IEA
 molecular_functionGO:0050660 flavin adenine dinucleotide binding IEA
 molecular_functionGO:0051287 NAD binding IEA


Pathways (from Reactome)
Pathway description
Regulation of pyruvate dehydrogenase (PDH) complex
Glyoxylate metabolism and glycine degradation
Signaling by Retinoic Acid
Glycine degradation
Pyruvate metabolism
Branched-chain amino acid catabolism
Lysine catabolism
Citric acid cycle (TCA cycle)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000252 Microcephaly "Microcephaly is a neurodevelopmental disorder in which the circumference of the head is more than two standard deviations smaller than the age- and gender-dependent norm." [HPO:curators]
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 HP:0000708 Behavioural/Psychiatric Abnormality 
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001251 Ataxia "Ataxia is a nonspecific neurological sign and symptom consisting of gross lack of coordination of muscle movements. Ataxia is caused by dysfunction of one or more parts of the nervous system including the cerebellum, the sensory nervous system, the vestibular system, or the cerebral cortex." [HPO:curators]
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 HP:0001254 Lethargy 
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 HP:0001257 Spasticity "A motor disorder characterized by a velocity-dependent increase in tonic stretch reflexes with increased muscle tone, exaggerated (hyperexcitable) tendon reflexes." [HPO:curators]
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
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 HP:0001298 Encephalopathy 
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 HP:0001332 Dystonia "An abnormally increased muscular tone that causes fixed abnormal postures. There is a slow, intermittent twisting motion that leads to exaggerated turning and posture of the extremities and trunk." [HPO:curators]
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 HP:0001399 Hepatic failure 
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 HP:0001410 Decreased liver function 
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 HP:0001508 Failure to thrive 
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 HP:0001638 Cardiomyopathy 
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 HP:0001639 Hypertrophic cardiomyopathy 
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 HP:0001942 Metabolic acidosis 
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 HP:0001943 Hypoglycemia "A lower than normal level of blood glucose." [HPO:curators]
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 HP:0001987 Hyperammonemia 
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 HP:0002013 Vomiting 
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 HP:0002151 Increased serum lactate "Abnormally increased level of blood lactate (2-hydroxypropanoic acid). Lactate is produced from pyruvate by lactate dehydrogenase during normal metabolism." [HPO:curators]
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 HP:0002240 Hepatomegaly "An abnormal enlargment of the liver." [HPO:curators]
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 HP:0002480 Hepatic encephalopathy 
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 HP:0002910 Elevated transaminases "Elevations of the levels of SGOT and SGPT in the serum. SGOT (serum glutamic oxaloacetic transaminase) and SGPT (serum glutamic pyruvic transaminase) are transaminases primarily found in the liver and heart and are released into the bloodstream as the result of liver or heart damage. SGOT and SGPT are used clinically mainly as markers of liver damage." [HPO:curators]
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 HP:0003128 Lactic acidemia "An abnormal buildup of `lactic acid` (CHEBI:28358) in the body, leading to `acidification` (GO:0045851) of the blood." [HPO:probinson]
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 HP:0003234 Decreased plasma carnitine 
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 HP:0003394 Muscle cramps 
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 HP:0003828 Variable expressivity 
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 HP:0007663 Decreased central vision 
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 HP:0008344 Elevated plasma branched chain amino acids 
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 HP:0010913 Hyperisoleucinemia "An increased concentration of `isoleucine` (CHEBI:24898) in the `blood` (FMA:9670)." [HPO:gcarletti]
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 HP:0011968 Feeding difficulties "Impaired ability to eat related to problems gathering food and getting ready to suck, chew, or swallow it." [ISCA:eriggs]
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 HP:0012402 Increased urine alpha-ketoglutarate concentration "A greater than normal concentration of `2-oxoglutaric acid` (CHEBI:30915) in the urine." [HPO:probinson]
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 HP:0012758 Neurodevelopmental delay 
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 HP:0030872 Abnormal cardiac ventricular function "An abnormality of the cardiac ventricular function." [NIHR:ldaugherty]
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 HP:0100724 Hypercoagulability 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000004799 PDK4 / Q16654 / pyruvate dehydrogenase kinase 4  / reaction
 ENSG00000005882 PDK2 / Q15119 / pyruvate dehydrogenase kinase 2  / reaction
 ENSG00000140905 GCSH / P23434 / glycine cleavage system protein H  / reaction
 ENSG00000119689 DLST / P36957 / dihydrolipoamide S-succinyltransferase  / complex
 ENSG00000083123 BCKDHB / P21953 / branched chain keto acid dehydrogenase E1 subunit beta  / complex
 ENSG00000150768 DLAT / P10515 / dihydrolipoamide S-acetyltransferase  / complex
 ENSG00000137992 DBT / P11182 / dihydrolipoamide branched chain transacylase E2  / complex
 ENSG00000091140 DLD / P09622 / dihydrolipoamide dehydrogenase  / complex
 ENSG00000248098 BCKDHA / P12694 / branched chain keto acid dehydrogenase E1, alpha polypeptide  / complex
 ENSG00000105953 OGDH / Q02218 / oxoglutarate dehydrogenase  / complex
 ENSG00000103507 BCKDK / O14874 / branched chain ketoacid dehydrogenase kinase  / reaction
 ENSG00000110435 PDHX / O00330 / pyruvate dehydrogenase complex component X  / complex
 ENSG00000168291 PDHB / P11177 / pyruvate dehydrogenase E1 beta subunit  / complex
 ENSG00000163644 PPM1K / Q8N3J5 / protein phosphatase, Mg2+/Mn2+ dependent 1K  / reaction
 ENSG00000163114 PDHA2 / P29803 / pyruvate dehydrogenase E1 alpha 2 subunit  / complex
 ENSG00000152256 PDK1 / Q15118 / pyruvate dehydrogenase kinase 1  / reaction
 ENSG00000131828 PDHA1 / P08559 / pyruvate dehydrogenase E1 alpha 1 subunit  / complex
 ENSG00000067992 PDK3 / Q15120 / pyruvate dehydrogenase kinase 3  / reaction






 

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