ENSG00000139679


Homo sapiens

Features
Gene ID: ENSG00000139679
  
Biological name :LPAR6
  
Synonyms : LPAR6 / lysophosphatidic acid receptor 6 / P43657
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 13
Strand: -1
Band: q14.2
Gene start: 48389567
Gene end: 48444704
  
Corresponding Affymetrix probe sets: 1557763_at (Human Genome U133 Plus 2.0 Array)   218589_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000482660
Ensembl peptide - ENSP00000344353
Ensembl peptide - ENSP00000367691
NCBI entrez gene - 10161     See in Manteia.
OMIM - 609239
RefSeq - NM_001162497
RefSeq - NM_001162498
RefSeq - NM_005767
RefSeq Peptide - NP_001155969
RefSeq Peptide - NP_001155970
RefSeq Peptide - NP_005758
swissprot - P43657
swissprot - A0A024RDT2
Ensembl - ENSG00000139679
  
Related genetic diseases (OMIM): 278150 - Hypotrichosis 8, 278150
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 lpar6aENSDARG00000062552Danio rerio
 lpar6bENSDARG00000069441Danio rerio
 LPAR6ENSGALG00000016998Gallus gallus
 Lpar6ENSMUSG00000033446Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
LPAR4 / Q99677 / lysophosphatidic acid receptor 4ENSG0000014714553
LPAR5 / Q9H1C0 / lysophosphatidic acid receptor 5ENSG0000018457433
GPR17 / Q13304 / G protein-coupled receptor 17ENSG0000014423028
GPR174 / Q9BXC1 / G protein-coupled receptor 174ENSG0000014713828
P2RY2 / P41231 / purinergic receptor P2Y2ENSG0000017559128
Q9Y271 / CYSLTR1 / cysteinyl leukotriene receptor 1ENSG0000017319828
P2RY4 / P51582 / pyrimidinergic receptor P2Y4ENSG0000018691228
Q9NS75 / CYSLTR2 / cysteinyl leukotriene receptor 2ENSG0000015220727
O00398 / P2RY10 / P2Y receptor family member 10ENSG0000007858927
P2RY6 / Q15077 / pyrimidinergic receptor P2Y6ENSG0000017163126
P2RY1 / P47900 / purinergic receptor P2Y1ENSG0000016986026
GPR183 / P32249 / G protein-coupled receptor 183ENSG0000016950825
PTAFR / P25105 / platelet activating factor receptorENSG0000016940324
OXGR1 / Q96P68 / oxoglutarate receptor 1ENSG0000016562122
Q9BXA5 / SUCNR1 / succinate receptor 1ENSG0000019882922
P2RY11 / Q96G91 / purinergic receptor P2Y11ENSG0000024416519
PPAN-P2RY11 / PPAN-P2RY11 readthroughENSG0000024320719


Protein motifs (from Interpro)
Interpro ID Name
 IPR000276  G protein-coupled receptor, rhodopsin-like
 IPR017452  GPCR, rhodopsin-like, 7TM


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007165 signal transduction IEA
 biological_processGO:0007186 G-protein coupled receptor signaling pathway TAS
 biological_processGO:0035025 positive regulation of Rho protein signal transduction IBA
 biological_processGO:0051482 positive regulation of cytosolic calcium ion concentration involved in phospholipase C-activating G-protein coupled signaling pathway IBA
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IDA
 molecular_functionGO:0004871 obsolete signal transducer activity IEA
 molecular_functionGO:0004930 G-protein coupled receptor activity IEA
 molecular_functionGO:0070915 lysophosphatidic acid receptor activity IBA


Pathways (from Reactome)
Pathway description
G alpha (q) signalling events
P2Y receptors


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000479 Abnormality of the retina 
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 HP:0000486 Strabismus "Strabismus (also known as squint) is a condition in which the eyes are not properly aligned with each other." [HPO:curators]
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 HP:0000518 Cataract "A cataract is an opacity or clouding that develops in the crystalline `lens` (FMA:58241) of the eye or in its `capsule` (FMA:58881)." [HPO:probinson]
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 HP:0000535 Sparse eyebrows 
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 HP:0000615 Abnormality of the pupils 
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 HP:0000653 Sparse eyelashes "Decreased density/number of eyelashes." [pmid:19125427]
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 HP:0001006 Hypotrichosis "Reduced or lacking hair growth." [HPO:curators]
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 HP:0001596 Alopecia "Loss of hair from the head or body." [HPO:curators]
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 HP:0001803 Nail pitting 
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 HP:0001807 Nail ridging 
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 HP:0002208 Coarse hair 
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 HP:0002209 Sparse scalp hair "Sparseness of the `head hair` (FMA:54241)." [HPO:probinson]
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 HP:0002213 Fine hair 
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 HP:0002215 Sparse axillary hair 
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 HP:0002217 Slow-growing hair 
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 HP:0002224 Woolly hair 
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 HP:0002231 Sparse body hair "Sparseness of the body hair." [HPO:probinson]
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 HP:0002286 Light colored hair 
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 HP:0002299 Fine, brittle hair 
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 HP:0004782 Hypotrichosis of the scalp "Reduced or lacking hair growth of the scalp." [HPO:curators]
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 HP:0005338 Sparse lateral eyebrows 
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 HP:0005599 Hair hypopigmentation 
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 HP:0011359 Dry hair "Hair that lacks the lustre (shine or gleam) of normal hair." [DDD:cmoss]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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