ENSG00000151067


Homo sapiens

Features
Gene ID: ENSG00000151067
  
Biological name :CACNA1C
  
Synonyms : CACNA1C / calcium voltage-gated channel subunit alpha1 C / Q13936
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 12
Strand: 1
Band: p13.33
Gene start: 1970786
Gene end: 2697950
  
Corresponding Affymetrix probe sets: 208020_s_at (Human Genome U133 Plus 2.0 Array)   211592_s_at (Human Genome U133 Plus 2.0 Array)   238636_at (Human Genome U133 Plus 2.0 Array)   242973_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000385724
Ensembl peptide - ENSP00000382563
Ensembl peptide - ENSP00000385896
Ensembl peptide - ENSP00000482910
Ensembl peptide - ENSP00000479274
Ensembl peptide - ENSP00000478996
Ensembl peptide - ENSP00000445849
Ensembl peptide - ENSP00000437936
Ensembl peptide - ENSP00000266376
Ensembl peptide - ENSP00000329877
Ensembl peptide - ENSP00000336982
Ensembl peptide - ENSP00000341092
Ensembl peptide - ENSP00000382500
Ensembl peptide - ENSP00000382504
Ensembl peptide - ENSP00000382506
Ensembl peptide - ENSP00000382510
Ensembl peptide - ENSP00000382512
Ensembl peptide - ENSP00000382515
Ensembl peptide - ENSP00000382526
Ensembl peptide - ENSP00000382530
Ensembl peptide - ENSP00000382537
Ensembl peptide - ENSP00000382542
Ensembl peptide - ENSP00000382546
Ensembl peptide - ENSP00000382547
Ensembl peptide - ENSP00000382549
Ensembl peptide - ENSP00000382552
Ensembl peptide - ENSP00000382557
NCBI entrez gene - 775     See in Manteia.
OMIM - 114205
RefSeq - XM_017019955
RefSeq - NM_001167625
RefSeq - NM_199460
RefSeq - XM_006719017
RefSeq - XM_011521020
RefSeq - XM_011521023
RefSeq - XM_017019926
RefSeq - XM_017019927
RefSeq - XM_017019928
RefSeq - XM_017019929
RefSeq - XM_017019930
RefSeq - XM_017019931
RefSeq - XM_017019932
RefSeq - XM_017019933
RefSeq - XM_017019934
RefSeq - XM_017019935
RefSeq - XM_017019936
RefSeq - XM_017019937
RefSeq - XM_017019938
RefSeq - XM_017019939
RefSeq - XM_017019940
RefSeq - XM_017019941
RefSeq - XM_017019942
RefSeq - XM_017019943
RefSeq - XM_017019944
RefSeq - XM_017019945
RefSeq - XM_017019946
RefSeq - XM_017019947
RefSeq - XM_017019948
RefSeq - XM_017019949
RefSeq - XM_017019950
RefSeq - XM_017019951
RefSeq - XM_017019952
RefSeq - XM_017019953
RefSeq - XM_017019954
RefSeq - NM_000719
RefSeq - NM_001129827
RefSeq - NM_001129829
RefSeq - NM_001129830
RefSeq - NM_001129831
RefSeq - NM_001129832
RefSeq - NM_001129833
RefSeq - NM_001129834
RefSeq - NM_001129835
RefSeq - NM_001129836
RefSeq - NM_001129837
RefSeq - NM_001129838
RefSeq - NM_001129839
RefSeq - NM_001129840
RefSeq - NM_001129841
RefSeq - NM_001129842
RefSeq - NM_001129843
RefSeq - NM_001129844
RefSeq - NM_001129846
RefSeq - NM_001167623
RefSeq - NM_001167624
RefSeq Peptide - NP_001123299
RefSeq Peptide - NP_001123312
RefSeq Peptide - NP_001123313
RefSeq Peptide - NP_001123314
RefSeq Peptide - NP_001123315
RefSeq Peptide - NP_001123316
RefSeq Peptide - NP_001123318
RefSeq Peptide - NP_001161095
RefSeq Peptide - NP_001161096
RefSeq Peptide - NP_001161097
RefSeq Peptide - NP_955630
RefSeq Peptide - NP_000710
RefSeq Peptide - NP_001123301
RefSeq Peptide - NP_001123302
RefSeq Peptide - NP_001123303
RefSeq Peptide - NP_001123304
RefSeq Peptide - NP_001123305
RefSeq Peptide - NP_001123306
RefSeq Peptide - NP_001123307
RefSeq Peptide - NP_001123308
RefSeq Peptide - NP_001123309
RefSeq Peptide - NP_001123310
RefSeq Peptide - NP_001123311
swissprot - A0A0A0MSA1
swissprot - A0A0A0MR67
swissprot - A0A087WZV3
swissprot - A0A087WV93
swissprot - F5GY28
swissprot - F5H0X0
swissprot - F5H522
swissprot - F5H638
swissprot - Q13936
swissprot - A0A087WUX4
swissprot - E9PDI6
Ensembl - ENSG00000151067
  
Related genetic diseases (OMIM): 601005 - Timothy syndrome, 601005
  611875 - Brugada syndrome 3, 611875
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 cacna1cENSDARG00000008398Danio rerio
 CACNA1CENSGALG00000013022Gallus gallus
 Q01815ENSMUSG00000051331Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q01668 / CACNA1D / calcium voltage-gated channel subunit alpha1 DENSG0000015738867
O60840 / CACNA1F / calcium voltage-gated channel subunit alpha1 FENSG0000010200156
Q13698 / CACNA1S / calcium voltage-gated channel subunit alpha1 SENSG0000008124856
Q00975 / CACNA1B / calcium voltage-gated channel subunit alpha1 BENSG0000014840839
O00555 / CACNA1A / calcium voltage-gated channel subunit alpha1 AENSG0000014183739
Q15878 / CACNA1E / calcium voltage-gated channel subunit alpha1 EENSG0000019821637
NALCN / Q8IZF0 / sodium leak channel, non-selectiveENSG0000010245218
Q8NEC5 / CATSPER1 / cation channel sperm associated 1ENSG000001752947


Protein motifs (from Interpro)
Interpro ID Name
 IPR002077  Voltage-dependent calcium channel, alpha-1 subunit
 IPR005446  Voltage-dependent calcium channel, L-type, alpha-1 subunit
 IPR005451  Voltage-dependent calcium channel, L-type, alpha-1C subunit
 IPR005821  Ion transport domain
 IPR014873  Voltage-dependent calcium channel, alpha-1 subunit, IQ domain
 IPR031649  Voltage-dependent L-type calcium channel, IQ-associated domain
 IPR031688  Voltage-gated calcium channel subunit alpha, C-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002520 immune system development IMP
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0006816 calcium ion transport IEA
 biological_processGO:0007204 positive regulation of cytosolic calcium ion concentration IDA
 biological_processGO:0007507 heart development IMP
 biological_processGO:0010881 regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion TAS
 biological_processGO:0034220 ion transmembrane transport IEA
 biological_processGO:0034765 regulation of ion transmembrane transport IEA
 biological_processGO:0035115 embryonic forelimb morphogenesis IMP
 biological_processGO:0035585 calcium-mediated signaling using extracellular calcium source TAS
 biological_processGO:0043010 camera-type eye development IMP
 biological_processGO:0050796 regulation of insulin secretion TAS
 biological_processGO:0055085 transmembrane transport IEA
 biological_processGO:0060402 calcium ion transport into cytosol TAS
 biological_processGO:0061337 cardiac conduction IMP
 biological_processGO:0061577 calcium ion transmembrane transport via high voltage-gated calcium channel IDA
 biological_processGO:0070588 calcium ion transmembrane transport IEA
 biological_processGO:0086002 cardiac muscle cell action potential involved in contraction IMP
 biological_processGO:0086012 membrane depolarization during cardiac muscle cell action potential IMP
 biological_processGO:0086045 membrane depolarization during AV node cell action potential IMP
 biological_processGO:0086064 cell communication by electrical coupling involved in cardiac conduction TAS
 biological_processGO:0086091 regulation of heart rate by cardiac conduction IMP
 biological_processGO:0098911 regulation of ventricular cardiac muscle cell action potential IMP
 biological_processGO:0098912 membrane depolarization during atrial cardiac muscle cell action potential IMP
 cellular_componentGO:0005737 cytoplasm IDA
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0005891 voltage-gated calcium channel complex IEA
 cellular_componentGO:0014069 postsynaptic density IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030018 Z disc ISS
 cellular_componentGO:1990454 L-type voltage-gated calcium channel complex IDA
 molecular_functionGO:0005216 ion channel activity IEA
 molecular_functionGO:0005244 voltage-gated ion channel activity IEA
 molecular_functionGO:0005245 voltage-gated calcium channel activity IEA
 molecular_functionGO:0005262 calcium channel activity IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0005516 calmodulin binding IPI
 molecular_functionGO:0008331 high voltage-gated calcium channel activity TAS
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0051393 alpha-actinin binding IPI
 molecular_functionGO:0086007 voltage-gated calcium channel activity involved in cardiac muscle cell action potential IMP
 molecular_functionGO:0086056 voltage-gated calcium channel activity involved in AV node cell action potential IMP


Pathways (from Reactome)
Pathway description
Adrenaline,noradrenaline inhibits insulin secretion
NCAM1 interactions
Regulation of insulin secretion
Phase 0 - rapid depolarisation
Phase 2 - plateau phase


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000219 Thin upper lip 
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 HP:0000311 Round face "An unusually round appearance of the face." [HPO:curators]
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 HP:0000691 Microdontia 
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 HP:0000821 Hypothyroidism 
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 HP:0001159 Syndactyly "Webbing or fusion of the fingers or toes, involving soft parts only or including bone structure. Bony fusions are revered to as "bony" Syndactyly if the fusion occurs in a radio-ulnar axis. Fusions of bones of the fingers or toes in a proximo-distal axis are refered to as "Symphalangism"." [HPO:curators]
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 HP:0001249 Mental retardation 
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001279 Syncope "Syncope refers to a generalized weakness of muscles with loss of postural tone, inability to stand upright, and loss of consciousness. Once the patient is in a horizontal position, blood flow to the brain is no longer hindered by gravitation and consciousness is regained. Unconsciousness usually lasts for seconds to minutes. Headache and drowsiness (which usually follow seizures) do not follow a syncopal attack. Syncope results from a sudden impairment of brain metabolism usually due to a reduction in cerebral blood flow. This term refers to an abnormally increased disposition to syncope." [HPO:curators]
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 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
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 HP:0001629 Ventricular septal defect "A hole between the two bottom chambers (ventricles) of the heart. The defect is centered around the most superior aspect of the ventricular septum." [HPO:curators]
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 HP:0001636 Tetralogy of Fallot "A congenital cardiac malformation comprising pulmonary stenosis, overriding aorta, ventricular septum defect, and right ventricular hypertrophy. The diagnosis of TOF is made if at least three of the four above mentioned features are present." [HPO:curators]
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 HP:0001640 Cardiomegaly 
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 HP:0001643 Patent ductus arteriosus 
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 HP:0001645 Sudden cardiac death 
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 HP:0001655 Patent foramen ovale 
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 HP:0001657 Prolonged QT interval on EKG 
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 HP:0001699 Sudden death 
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 HP:0001943 Hypoglycemia "A lower than normal level of blood glucose." [HPO:curators]
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 HP:0002090 Pneumonia 
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 HP:0002719 Recurrent infections 
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 HP:0002901 Hypocalcemia "A level of blood calcium that is lower than normal." [HPO:curators]
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 HP:0004308 Ventricular arrhythmia 
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 HP:0005110 Atrial fibrillation 
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 HP:0005280 Depressed nasal root and bridge 
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 HP:0012232 Shortened QT interval "Decreased time between the start of the Q wave and the end of the T wave as measured by the electrocardiogram (EKG)." [HPO:probinson]
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 HP:0012272 J wave "The J wave is a positive convex deflection that occurs at the junction of the QRS complex and ST segment, the J-point." [HPO:probinson, pmid:19561994]
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 HP:0012387 Bronchitis "Inflammation of the large airways in the lung including any part of the bronchi from the primary bronchi to the tertiary bronchi." [HPO:probinson]
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 HP:0012725 Cutaneous syndactyly "A soft tissue continuity in the A/P axis between two digits that extends distally to at least the level of the proximal interphalangeal joints, or a soft tissue continuity in the A/P axis between two digits that lies significantly distal to the flexion crease that overlies the metacarpophalangeal or metatarsophalangeal joint of the adjacent digits." [HPO:probinson]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000007402 Q9NY47 / CACNA2D2 / calcium voltage-gated channel auxiliary subunit alpha2delta 2  / complex
 ENSG00000151062 Q7Z3S7 / CACNA2D4 / calcium voltage-gated channel auxiliary subunit alpha2delta 4  / complex
 ENSG00000157445 Q8IZS8 / CACNA2D3 / calcium voltage-gated channel auxiliary subunit alpha2delta 3  / complex
 ENSG00000165995 CACNB2 / Q08289 / calcium voltage-gated channel auxiliary subunit beta 2  / complex
 ENSG00000167535 CACNB3 / P54284 / calcium voltage-gated channel auxiliary subunit beta 3  / complex
 ENSG00000067191 CACNB1 / Q02641 / calcium voltage-gated channel auxiliary subunit beta 1  / complex
 ENSG00000151067 Q13936 / CACNA1C / calcium voltage-gated channel subunit alpha1 C  / complex
 ENSG00000182389 CACNB4 / O00305 / calcium voltage-gated channel auxiliary subunit beta 4  / complex
 ENSG00000153956 P54289 / CACNA2D1 / calcium voltage-gated channel auxiliary subunit alpha2delta 1  / complex






 

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