ENSG00000152208


Homo sapiens

Features
Gene ID: ENSG00000152208
  
Biological name :GRID2
  
Synonyms : glutamate ionotropic receptor delta type subunit 2 / GRID2 / O43424
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 4
Strand: 1
Band: q22.1
Gene start: 92303622
Gene end: 93810157
  
Corresponding Affymetrix probe sets: 221364_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000422845
Ensembl peptide - ENSP00000421257
Ensembl peptide - ENSP00000423331
Ensembl peptide - ENSP00000490775
Ensembl peptide - ENSP00000483084
Ensembl peptide - ENSP00000425794
Ensembl peptide - ENSP00000282020
NCBI entrez gene - 2895     See in Manteia.
OMIM - 602368
RefSeq - XM_017008126
RefSeq - XM_017008118
RefSeq - XM_017008119
RefSeq - XM_017008120
RefSeq - XM_017008121
RefSeq - XM_017008122
RefSeq - XM_017008123
RefSeq - XM_017008124
RefSeq - XM_017008125
RefSeq - NM_001286838
RefSeq - NM_001510
RefSeq - XM_011531893
RefSeq - XM_011531894
RefSeq - XM_011531895
RefSeq Peptide - NP_001273767
RefSeq Peptide - NP_001501
swissprot - A0A1B0GW49
swissprot - H0YA12
swissprot - D6R9W8
swissprot - A0A087X043
swissprot - O43424
swissprot - D6R976
Ensembl - ENSG00000152208
  
Related genetic diseases (OMIM): 616204 - Spinocerebellar ataxia, autosomal recessive 18, 616204
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 grid2ENSDARG00000055302Danio rerio
 GRID2ENSGALG00000010397Gallus gallus
 Grid2ENSMUSG00000071424Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
GRID1 / Q9ULK0 / glutamate ionotropic receptor delta type subunit 1ENSG0000018277156
GRIK2 / Q13002 / glutamate ionotropic receptor kainate type subunit 2ENSG0000016441825
GRIK1 / P39086 / glutamate ionotropic receptor kainate type subunit 1ENSG0000017118924
GRIK3 / Q13003 / glutamate ionotropic receptor kainate type subunit 3ENSG0000016387324
GRIK4 / Q16099 / glutamate ionotropic receptor kainate type subunit 4ENSG0000014940323
GRIA2 / P42262 / glutamate ionotropic receptor AMPA type subunit 2ENSG0000012025123
GRIA4 / P48058 / glutamate ionotropic receptor AMPA type subunit 4ENSG0000015257823
GRIA1 / P42261 / glutamate ionotropic receptor AMPA type subunit 1ENSG0000015551122
GRIA3 / P42263 / glutamate ionotropic receptor AMPA type subunit 3ENSG0000012567522
GRIK5 / Q16478 / glutamate ionotropic receptor kainate type subunit 5ENSG0000010573721
GRIN2A / Q12879 / glutamate ionotropic receptor NMDA type subunit 2AENSG0000018345419
GRIN2B / Q13224 / glutamate ionotropic receptor NMDA type subunit 2BENSG0000027307919
GRIN2C / Q14957 / glutamate ionotropic receptor NMDA type subunit 2CENSG0000016150918
GRIN1 / Q05586 / glutamate ionotropic receptor NMDA type subunit 1ENSG0000017688418
GRIN2D / O15399 / glutamate ionotropic receptor NMDA type subunit 2DENSG0000010546418
GRIN3B / O60391 / glutamate ionotropic receptor NMDA type subunit 3BENSG0000011603217
GRIN3A / Q8TCU5 / glutamate ionotropic receptor NMDA type subunit 3AENSG0000019878517


Protein motifs (from Interpro)
Interpro ID Name
 IPR001320  Ionotropic glutamate receptor
 IPR001508  Ionotropic glutamate receptor, metazoa
 IPR001828  Receptor, ligand binding region
 IPR019594  Ionotropic glutamate receptor, L-glutamate and glycine-binding domain
 IPR028082  Periplasmic binding protein-like I


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0007157 heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules ISS
 biological_processGO:0007215 glutamate receptor signaling pathway TAS
 biological_processGO:0010975 regulation of neuron projection development IEA
 biological_processGO:0021707 cerebellar granule cell differentiation ISS
 biological_processGO:0034220 ion transmembrane transport IEA
 biological_processGO:0034613 cellular protein localization ISS
 biological_processGO:0035235 ionotropic glutamate receptor signaling pathway IEA
 biological_processGO:0035249 synaptic transmission, glutamatergic ISS
 biological_processGO:0043523 regulation of neuron apoptotic process ISS
 biological_processGO:0051965 positive regulation of synapse assembly IMP
 biological_processGO:0060079 excitatory postsynaptic potential IEA
 biological_processGO:0060134 prepulse inhibition ISS
 biological_processGO:1900454 positive regulation of long term synaptic depression IMP
 biological_processGO:1904861 excitatory synapse assembly IMP
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005887 integral component of plasma membrane TAS
 cellular_componentGO:0008328 ionotropic glutamate receptor complex ISS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030054 cell junction IEA
 cellular_componentGO:0036477 somatodendritic compartment IEA
 cellular_componentGO:0043197 dendritic spine ISS
 cellular_componentGO:0045202 synapse IEA
 cellular_componentGO:0045211 postsynaptic membrane IEA
 molecular_functionGO:0004970 ionotropic glutamate receptor activity IEA
 molecular_functionGO:0005216 ion channel activity IEA
 molecular_functionGO:0005234 extracellularly glutamate-gated ion channel activity IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008066 glutamate receptor activity TAS
 molecular_functionGO:0030165 PDZ domain binding ISS
 molecular_functionGO:0097110 scaffold protein binding ISS


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000543 Pale optic disks 
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 HP:0000565 Esotropia 
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 HP:0000639 Nystagmus "Rhythmic, involuntary oscillations of one or both eyes related to abnormality in fixation, conjugate gaze, or vestibular mechanisms." [HPO:curators]
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 HP:0000640 Gaze-evoked nystagmus "Nystagmus made apparent by looking to the right or to the left." [HPO:curators]
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 HP:0000657 Oculomotor apraxia 
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 HP:0000666 Nystagmus, horizontal 
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 HP:0001260 Dysarthria "Dysarthric speech is a general description referring to a neurological speech disorder characterized by poor articulation. Depending on the involved neurological structures, dysarthria may be further classified as spastic, flaccid, ataxic, hyperkinetic and hypokinetic, or mixed." [HPO:curators]
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001272 Cerebellar atrophy 
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 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
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 HP:0001310 Dysmetria 
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 HP:0001347 Hyperreflexia "The presence of overactive or overresponsive reflexes." [HPO:curators]
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 HP:0001371 Contractures 
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 HP:0002066 Gait ataxia "Impairment of the ability to coordinate the movements required for normal walking." [HPO:curators]
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 HP:0002070 Limb ataxia 
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 HP:0002075 Dysdiadochokinesis "An inability to perform rapidly alternating movements, such as rhythmically tapping the fingers on the knee, generally related to a cerebellar lesion." [HPO:curators]
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 HP:0002078 Truncal ataxia 
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 HP:0002167 Neurological speech impairment 
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 HP:0002311 Incoordination 
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 HP:0002355 Difficulty walking 
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 HP:0002465 Poor speech 
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 HP:0003487 Babinski sign "Upturning of the big toe (and sometimes fanning of the other toes) in response to stimulation of the sole of the foot. If the Babinski sign is present it can indicate damage to the corticospinal tract." [HPO:curators]
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 HP:0003593 Early onset 
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 HP:0006855 Cerebellar vermis atrophy 
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 HP:0012444 Brain atrophy "Partial or complete wasting (loss) of brain tissue that was once present." [HPO:probinson]
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 HP:0100543 Cognitive impairment "Abnormality in the process of thought including the ability to process information." [HPO:sdoelken]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr