ENSMUSG00000030731


Mus musculus

Features
Gene ID: ENSMUSG00000030731
  
Biological name :Syt3
  
Synonyms : synaptotagmin III / Syt3
  
Possible biological names infered from orthology : Q9BQG1 / synaptotagmin 3
  
Species: Mus musculus
  
Chr. number: 7
Strand: 1
Band: B3
Gene start: 44384102
Gene end: 44400187
  
Corresponding Affymetrix probe sets: 10552656 (MoGene1.0st)   1417708_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000116926
Ensembl peptide - ENSMUSP00000118158
Ensembl peptide - ENSMUSP00000112432
Ensembl peptide - ENSMUSP00000112968
Ensembl peptide - ENSMUSP00000114070
NCBI entrez gene - 20981     See in Manteia.
MGI - MGI:99665
RefSeq - XM_017322089
RefSeq - XM_006540755
RefSeq - XM_017322088
RefSeq - NM_001114116
RefSeq - NM_016663
RefSeq - XM_017322087
RefSeq Peptide - NP_001107588
RefSeq Peptide - NP_057872
swissprot - D3Z1B8
swissprot - D3YYS0
swissprot - G3X9Y1
Ensembl - ENSMUSG00000030731
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 syt3ENSDARG00000075830Danio rerio
 SYT3ENSG00000213023Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Syt9 / Q9R0N9 / Synaptotagmin-9 / Q86SS6*ENSMUSG0000006254244
Syt10 / Q9R0N4 / synaptotagmin X / Q6XYQ8* / synaptotagmin 10*ENSMUSG0000006326043
Syt6 / Q9R0N8 / synaptotagmin VI / Q5T7P8* / synaptotagmin 6*ENSMUSG0000002784942
Syt1 / P46096 / synaptotagmin I / P21579* / synaptotagmin 1*ENSMUSG0000003586426
Syt2 / synaptotagmin II / Q8N9I0* / synaptotagmin 2*ENSMUSG0000002645225
Syt5 / Q9R0N5 / Synaptotagmin-5 / O00445*ENSMUSG0000000496125
Syt7 / Q9R0N7 / Synaptotagmin-7 / O43581*ENSMUSG0000002474325
Syt4 / P40749 / Synaptotagmin-4 / Q9H2B2*ENSMUSG0000002426121
Syt11 / Q9R0N3 / Synaptotagmin-11 / Q9BT88*ENSMUSG0000006892320
Syt8 / Q9R0N6 / synaptotagmin VIII / Q8NBV8* / synaptotagmin 8*ENSMUSG0000003109819


Protein motifs (from Interpro)
Interpro ID Name
 IPR000008  C2 domain
 IPR001565  Synaptotagmin
 IPR028682  Synaptotagmin-3
 IPR035892  C2 domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0017156 calcium ion regulated exocytosis IEA
 biological_processGO:1903861 positive regulation of dendrite extension IEA
 cellular_componentGO:0005768 endosome IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0002169 no phenotype detected "normal, viable and fertile appearance and behavior; indistinguishable from controls" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Tyrp1rgsc220/Tyrp1rgsc220
Genetic Background: involves: C57BL/6JJcl * DBA/2JJcl

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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