ENSMUSG00000041703


Mus musculus

Features
Gene ID: ENSMUSG00000041703
  
Biological name :Zic5
  
Synonyms : Zic5 / zinc finger protein of the cerebellum 5
  
Possible biological names infered from orthology : Q96T25 / Zic family member 5
  
Species: Mus musculus
  
Chr. number: 14
Strand: -1
Band: E5
Gene start: 122456795
Gene end: 122465677
  
Corresponding Affymetrix probe sets: 10376241 (MoGene1.0st)   10422504 (MoGene1.0st)   1425666_at (Mouse Genome 430 2.0 Array)   1456140_at (Mouse Genome 430 2.0 Array)   1456219_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000035754
NCBI entrez gene - 65100     See in Manteia.
MGI - MGI:1929518
RefSeq - NM_022987
RefSeq Peptide - NP_075363
swissprot - A0A0R4J0E2
Ensembl - ENSMUSG00000041703
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 zic5ENSDARG00000016022Danio rerio
 ZIC5ENSGALG00000034197Gallus gallus
 ZIC5ENSG00000139800Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Zic2 / zinc finger protein of the cerebellum 2 / O95409* / Zic family member 2*ENSMUSG0000006152438
Zic1 / P46684 / zinc finger protein of the cerebellum 1 / Q15915* / Zic family member 1*ENSMUSG0000003236836
Zic3 / Q62521 / zinc finger protein of the cerebellum 3 / O60481* / Zic family member 3*ENSMUSG0000006786034
Zic4 / Q61467 / zinc finger protein of the cerebellum 4 / Q8N9L1* / Zic family member 4*ENSMUSG0000003697232
Gli3 / Q61602 / Transcriptional activator GLI3 Transcriptional repressor GLI3R / P10071* / GLI family zinc finger 3*ENSMUSG0000002131824
Gli2 / Q0VGT2 / Zinc finger protein GLI2 / P10070* / GLI family zinc finger 2*ENSMUSG0000004840223
Glis3 / Q6XP49 / Zinc finger protein GLIS3 / Q8NEA6* / GLIS family zinc finger 3*ENSMUSG0000005294222
Glis1 / Q8K1M4 / Zinc finger protein GLIS1 / Q8NBF1* / GLIS family zinc finger 1*ENSMUSG0000003476219
Gli1 / P47806 / Zinc finger protein GLI1 / P08151* / GLI family zinc finger 1*ENSMUSG0000002540719
Glis2 / Q8VDL9 / Zinc finger protein GLIS2 / Q9BZE0* / GLIS family zinc finger 2*ENSMUSG0000001430317


Protein motifs (from Interpro)
Interpro ID Name
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013087  Zinc finger C2H2-type
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0003676 nucleic acid binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0000087 absent mandible "missing the lower bony framework of the mouth where the inferior teeth are held" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8, csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Fyntm1Sor/Fyntm1Sor,Yes1tm1Sor/Yes1tm1Sor
Genetic Background: involves: 129S7/SvEvBrd

 MP:0000433 microcephaly "an abnormally small head" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8, csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: Fyntm1Sor/Fyntm1Sor,Yes1tm1Sor/Yes1tm1Sor
Genetic Background: involves: 129S7/SvEvBrd

 MP:0000788 abnormal cerebral cortex morphology "malformed gray cellular mantle covering the surface of the brain" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8, J:38857]
Show

Allelic Composition: Lmx1btm1Rjo/Lmx1btm1Rjo
Genetic Background: involves: 129S7/SvEvBrd

Allelic Composition: Zic5tm1Sia/Zic5tm1Sia
Genetic Background: involves: C57BL/6 * CBA

 MP:0000807 abnormal hippocampus morphology "absent or malformed deep lying structure of the cerebrum involved with memory storage and spatial navigation" [The Atlas of Mouse Development:ISBN 0-12-402035-6, MGI:Cls, J:38857]
Show

Allelic Composition: Lmx1btm1Rjo/Lmx1btm1Rjo
Genetic Background: involves: 129S7/SvEvBrd

 MP:0000808 abnormal hippocampus development "improper differentiation of the hippocampus" [tc:Teresa Chu , Mouse Genome Informatics Curator]
Show

Allelic Composition: Zic5tm1Sia/Zic5tm1Sia
Genetic Background: involves: C57BL/6 * CBA

 MP:0000820 abnormal choroid plexus morphology "malformed or absent fringe of the tela choroidea of the cerebral ventricles" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:45302]
Show

Allelic Composition: Zic5tm1Sia/Zic5tm1Sia
Genetic Background: involves: C57BL/6 * CBA

 MP:0000825 dilated lateral ventricles "increase over the normal size of the horseshoe-shaped cavities of the cerebrum" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, MGI:CLS, J:38857]
Show

Allelic Composition: Zic5tm1Sia/Zic5tm1Sia
Genetic Background: involves: C57BL/6 * CBA

 MP:0000827 dilated third ventricle "enlarged narrow cleft inferior to the corpus callosum, within the diencephalon, between the paired thalami; its floor is formed by the hypothalamus, its anterior wall by the lamina terminalis, and its roof by ependyma; it communicates with the fourth ventricle by the cerebral aqueduct, and with the lateral ventricles by the interventricular foramina" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator, MeSH:National Library of Medicine - Medical Subject Headings , 2003]
Show

Allelic Composition: Zic5tm1Sia/Zic5tm1Sia
Genetic Background: involves: C57BL/6 * CBA

 MP:0000830 abnormal diencephalon morphology "any malformation or absence of the paired caudal parts of the prosencephalon from which the thalamus, hypothalamus, epithalamus and subthalamus are derived; these regions regulate autonomic, visceral and endocrine function, and process information directed to the cerebral cortex" [MeSH:National Library of Medicine - Medical Subject Headings , 2003, Principles of Neural Science , 3rd edition:ISBN 0-8385-8034-3]
Show

Allelic Composition: Lmx1btm1Rjo/Lmx1btm1Rjo
Genetic Background: involves: 129S7/SvEvBrd

 MP:0000837 abnormal hypothalamus morphology "any malformation or absence of the ventral part of the diencephalon extending from the region of the optic chiasm to the caudal border of the mammillary bodies and forming the inferior and lateral walls of the third ventricle; this region regulates the autonomic nervous system via hormone production and release" [MeSH:National Library of Medicine - Medical Subject Headings , 2003]
Show

Allelic Composition: Zic5tm1Sia/Zic5tm1Sia
Genetic Background: involves: C57BL/6 * CBA

 MP:0000914 exencephaly "neurocranial defects resulting in exposure or extrusion of the brain" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:49840]
Show

Allelic Composition: Lmx1btm1Rjo/Lmx1btm1Rjo
Genetic Background: involves: 129S7/SvEvBrd

Allelic Composition: Zic5tm1Sia/Zic5tm1Sia
Genetic Background: involves: C57BL/6 * CBA

 MP:0000929 open neural tube "incomplete invagination and fusion of the neuroepithelial layer in early development" [MGI:CLS, J:53370, J:62571]
Show

Allelic Composition: Lmx1btm1Rjo/Lmx1btm1Rjo
Genetic Background: involves: 129S7/SvEvBrd

 MP:0000934 abnormal telencephalon development "malformed or incomplete differentiation of the anterior division of the embryonic prosencephalon " [Stedman s Medical Dictionary:ISBN 0-683-40008-8, MGI:CLS, J:49840]
Show

Allelic Composition: Fyntm1Sor/Fyntm1Sor,Yes1tm1Sor/Yes1tm1Sor
Genetic Background: involves: 129S7/SvEvBrd

 MP:0000935 abnormal folding of telencephalic vesicles "malformation of the stereotypic invaginations forming the paired diverticula of the telencephalon" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, MGI:cls, J:49840]
Show

Allelic Composition: Zic5tm1Sia/Zic5tm1Sia
Genetic Background: involves: C57BL/6 * CBA

 MP:0001081 abnormal cranial ganglia morphology "any anomaly, deformity, or malformation of the groups of nerve cell bodies associated with the twelve cranial nerves" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, MGI:cls, J:45302]
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Allelic Composition: Zic5tm1Sia/Zic5tm1Sia
Genetic Background: involves: C57BL/6 * CBA

 MP:0001092 abnormal trigeminal ganglion morphology "malformed group of sensory neuron cell bodies associated with the trigeminal nerve (fifth cranial nerve)" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:33038]
Show

Allelic Composition: Zic5tm1Sia/Zic5tm1Sia
Genetic Background: involves: C57BL/6 * CBA

 MP:0001096 abnormal glossopharyngeal ganglion morphology "malformed group of neuron cell bodies associated with the ninth cranial nerve" [MeSH:National Library of Medicine - Medical Subject Headings , 2003]
Show

Allelic Composition: Zic5tm1Sia/Zic5tm1Sia
Genetic Background: involves: C57BL/6 * CBA

 MP:0001262 decreased body weight "lower than normal average weight " [J:61295]
Show

Allelic Composition: Lmx1btm1Rjo/Lmx1btm1Rjo
Genetic Background: involves: 129S7/SvEvBrd

 MP:0001293 anophthalmia "congenital absence of all tissues of the eyes" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, MGI:CML, J:71979]
Show

Allelic Composition: Fyntm1Sor/Fyntm1Sor,Yes1tm1Sor/Yes1tm1Sor
Genetic Background: involves: 129S7/SvEvBrd

 MP:0001297 microphthalmia "reduced average size of the eyes" [J:18048]
Show

Allelic Composition: Fyntm1Sor/Fyntm1Sor,Yes1tm1Sor/Yes1tm1Sor
Genetic Background: involves: 129S7/SvEvBrd

 MP:0001406 abnormal gait "unusual or distinctive way of walking" [J:65038]
Show

Allelic Composition: Lmx1btm1Rjo/Lmx1btm1Rjo
Genetic Background: involves: 129S7/SvEvBrd

 MP:0001504 abnormal posture "atypical position of the limbs or carriage of the body" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:18984]
Show

Allelic Composition: Lmx1btm1Rjo/Lmx1btm1Rjo
Genetic Background: involves: 129S7/SvEvBrd

 MP:0001891 hydroencephaly "excessive accumulation of cerebrospinal fluid in the brain, especially the cerebral ventricles, often leading to increased brain size and other brain trauma" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8, MeSH:National Library of Medicine - Medical Subject Headings, 2003]
Show

Allelic Composition: Lmx1btm1Rjo/Lmx1btm1Rjo
Genetic Background: involves: 129S7/SvEvBrd

 MP:0002082 postnatal lethality "premature death anytime after postnatal day 1 to weaning age (3 weeks)" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Lmx1btm1Rjo/Lmx1btm1Rjo
Genetic Background: involves: 129S7/SvEvBrd

 MP:0002083 premature death "death after 3 weeks of age, but before normal life span" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Lmx1btm1Rjo/Lmx1btm1Rjo
Genetic Background: involves: 129S7/SvEvBrd

 MP:0002639 micrognathia "abnormally reduced size of the jaws, especially of the mandible" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8, pvb:Pierre Vanden Borre , Mouse Genome Informatics Curator]
Show

Allelic Composition: Zic5tm1Sia/Zic5tm1Sia
Genetic Background: involves: C57BL/6 * CBA

 MP:0003232 abnormal forebrain development "anomaly in the formation or patterning of the anterior primitive cerebral vesicle; most rostral of three primary vesicles of the embryonic neural tube" [J:93081, smb:Susan M Bello, Mouse Genome Informatics Curator]
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Allelic Composition: Zic5tm1Sia/Zic5tm1Sia
Genetic Background: involves: C57BL/6 * CBA

 MP:0003425 abnormal optic vesicle formation "anomalous formation of the hollow outgrowth from the lateral aspects of the embryonic forebrain from which the retina and optic nerve develop" [smb:Susan M Bello, Mouse Genome Informatics Curator, J:94391]
Show

Allelic Composition: Zic5tm1Sia/Zic5tm1Sia
Genetic Background: involves: C57BL/6 * CBA

 MP:0004077 abnormal striatum morphology "malformation of a large cluster of dopaminergic nerve cells, consisting of the caudate nucleus and the putamen, that controls movement, balance, and walking" [Principles of Neural Science , 3rd edition:ISBN 0-8385-8034-3]
Show

Allelic Composition: Zic5tm1Sia/Zic5tm1Sia
Genetic Background: involves: C57BL/6 * CBA

 MP:0004081 abnormal globus pallidus morphology "malformation of one of the basal ganglia involved with control of voluntary movement in the brain; consists of an external and an internal segment" [Principles of Neural Science , 3rd edition:ISBN 0-8385-8034-3]
Show

Allelic Composition: Zic5tm1Sia/Zic5tm1Sia
Genetic Background: involves: C57BL/6 * CBA

 MP:0004592 small mandible "reduced size of the lower bony framework of the mouth where the inferior teeth are held" [ISBN:0-683-40008-8 "Stedman s Medical Dictionary, 27th edition"]
Show

Allelic Composition: Lmx1btm1Rjo/Lmx1btm1Rjo
Genetic Background: involves: 129S7/SvEvBrd

 MP:0004870 small premaxilla "reduced size of the anterior and interior portion of the maxilla" [MGI:anna "Anna V. Anagnostopoulos, Mouse Genome Informatics Curator"]
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Allelic Composition: Lmx1btm1Rjo/Lmx1btm1Rjo
Genetic Background: involves: 129S7/SvEvBrd

 MP:0005358 abnormal incisor morphology "structural defect of the long pointed teeth; most anterior and prominent in the jaw" [pvb:Pierre Vanden Borre , Mouse Genome Informatics Curator, J:85574]
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Allelic Composition: Lmx1btm1Rjo/Lmx1btm1Rjo
Genetic Background: involves: 129S7/SvEvBrd

 MP:0005404 abnormal axon morphology "anomaly in the structure of the single process of a nerve cell that normally conducts impulses away from the cell body" [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
Show

Allelic Composition: Zic5tm1Sia/Zic5tm1Sia
Genetic Background: involves: C57BL/6 * CBA

 MP:0006007 abnormal basal ganglion morphology "malformation or absence of any of a group of nuclei associated with the ability to carry out willed movements, including the caudate, putamen, nucleus accumbens, globus pallidus, substantia nigra, and subthalamic nucleus" [smb:Susan M Bello, Mouse Genome Informatics Curator]
Show

Allelic Composition: Lmx1btm1Rjo/Lmx1btm1Rjo
Genetic Background: involves: 129S7/SvEvBrd

 MP:0011087 complete neonatal lethality "death of all organisms of a given genotype in a population within the neonatal period after birth (Mus: P0)" [MGI:csmith]
Show

Allelic Composition: Zic5tm1Sia/Zic5tm1Sia
Genetic Background: involves: C57BL/6 * CBA

 MP:0020527 small thalamus "decreased size of the thalamus" [MGI:smb]
Show

Allelic Composition: Zic5tm1Sia/Zic5tm1Sia
Genetic Background: involves: C57BL/6 * CBA

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
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