ENSMUSG00000061878


Mus musculus

Features
Gene ID: ENSMUSG00000061878
  
Biological name :Sphk1
  
Synonyms : Q8CI15 / Sphingosine kinase 1 / Sphk1
  
Possible biological names infered from orthology : Q9NYA1
  
Species: Mus musculus
  
Chr. number: 11
Strand: 1
Band: E2
Gene start: 116530925
Gene end: 116536674
  
Corresponding Affymetrix probe sets: 10382802 (MoGene1.0st)   1451596_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000114622
Ensembl peptide - ENSMUSP00000114819
Ensembl peptide - ENSMUSP00000131010
Ensembl peptide - ENSMUSP00000121219
Ensembl peptide - ENSMUSP00000121064
Ensembl peptide - ENSMUSP00000116055
Ensembl peptide - ENSMUSP00000064743
Ensembl peptide - ENSMUSP00000067865
Ensembl peptide - ENSMUSP00000097775
Ensembl peptide - ENSMUSP00000101994
Ensembl peptide - ENSMUSP00000101995
Ensembl peptide - ENSMUSP00000101996
NCBI entrez gene - 20698     See in Manteia.
MGI - MGI:1316649
RefSeq - XM_006532674
RefSeq - XM_006532673
RefSeq - XM_006532672
RefSeq - XM_006532670
RefSeq - XM_006532669
RefSeq - NM_001172472
RefSeq - NM_001172473
RefSeq - NM_001172475
RefSeq - NM_011451
RefSeq - NM_025367
RefSeq - XM_017314398
RefSeq - XM_006532671
RefSeq Peptide - NP_001165944
RefSeq Peptide - NP_001165943
RefSeq Peptide - NP_001165946
RefSeq Peptide - NP_035581
RefSeq Peptide - NP_079643
swissprot - Q8CI15
swissprot - B1AT89
swissprot - B1AT85
swissprot - B1AT86
swissprot - B1AT87
swissprot - B1AT88
Ensembl - ENSMUSG00000061878
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SPHK1ENSGALG00000023541Gallus gallus
 SPHK1ENSG00000176170Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Sphk2 / Q9JIA7 / sphingosine kinase 2 / Q9NRA0*ENSMUSG0000005734247
Cerk / Q8K4Q7 / Ceramide kinase / Q8TCT0*ENSMUSG0000003589122
Cerkl / ceramide kinase-like / Q49MI3*ENSMUSG0000007525619
Agk / Q9ESW4 / Acylglycerol kinase, mitochondrial / Q53H12* / acylglycerol kinase*ENSMUSG0000002991617


Protein motifs (from Interpro)
Interpro ID Name
 IPR001206  Diacylglycerol kinase, catalytic domain
 IPR016064  NAD kinase/diacylglycerol kinase-like domain superfamily
 IPR017438  Inorganic polyphosphate/ATP-NAD kinase, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001568 blood vessel development IGI
 biological_processGO:0003376 sphingosine-1-phosphate signaling pathway IEA
 biological_processGO:0006670 sphingosine metabolic process ISS
 biological_processGO:0006954 inflammatory response IMP
 biological_processGO:0007420 brain development IGI
 biological_processGO:0008152 metabolic process IEA
 biological_processGO:0008284 positive regulation of cell proliferation IGI
 biological_processGO:0010800 positive regulation of peptidyl-threonine phosphorylation ISO
 biological_processGO:0010803 regulation of tumor necrosis factor-mediated signaling pathway ISS
 biological_processGO:0016310 phosphorylation IEA
 biological_processGO:0019722 calcium-mediated signaling ISO
 biological_processGO:0030307 positive regulation of cell growth ISO
 biological_processGO:0030335 positive regulation of cell migration ISO
 biological_processGO:0031398 positive regulation of protein ubiquitination ISO
 biological_processGO:0032651 regulation of interleukin-1 beta production IMP
 biological_processGO:0043066 negative regulation of apoptotic process ISO
 biological_processGO:0045766 positive regulation of angiogenesis ISO
 biological_processGO:0045931 positive regulation of mitotic cell cycle ISO
 biological_processGO:0045987 positive regulation of smooth muscle contraction ISO
 biological_processGO:0046512 sphingosine biosynthetic process ISO
 biological_processGO:0046834 lipid phosphorylation IEA
 biological_processGO:0048146 positive regulation of fibroblast proliferation ISO
 biological_processGO:0051092 positive regulation of NF-kappaB transcription factor activity ISS
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm ISS
 cellular_componentGO:0005829 cytosol ISO
 cellular_componentGO:0005886 plasma membrane ISO
 cellular_componentGO:0016020 membrane IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0000287 magnesium ion binding ISO
 molecular_functionGO:0003677 DNA binding ISO
 molecular_functionGO:0003951 NAD+ kinase activity IEA
 molecular_functionGO:0005516 calmodulin binding ISO
 molecular_functionGO:0005524 ATP binding ISO
 molecular_functionGO:0008481 sphinganine kinase activity ISO
 molecular_functionGO:0016301 kinase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0017050 D-erythro-sphingosine kinase activity ISO
 molecular_functionGO:0038036 sphingosine-1-phosphate receptor activity ISO
 molecular_functionGO:0051721 protein phosphatase 2A binding ISO


Pathways (from Reactome)
Pathway description
Sphingolipid de novo biosynthesis
Association of TriC/CCT with target proteins during biosynthesis
VEGFR2 mediated cell proliferation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0000333 decreased bone marrow cell number "decreased number of cells that make up the core cavities of bones when compared to the norm" [tc:Teresa Chu , Mouse Genome Informatics Curator, J:60896]
Show

Allelic Composition: Tsc1tm1Hin/Tsc1+
Genetic Background: involves: 129S4/SvJae * C57BL/6J

 MP:0000717 abnormal lymphocyte number "deviation from the normal number of white blood cells" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
Show

Allelic Composition: Ndel1tm1Shr/Ndel1tm1Shr
Genetic Background: involves: 129S6/SvEvTac

 MP:0000914 exencephaly "neurocranial defects resulting in exposure or extrusion of the brain" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:49840]
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Allelic Composition: S1pr1tm1Rlp/S1pr1tm1Rlp
Genetic Background: involves: 129S6/SvEvTac * C57BL/6

 MP:0000928 incomplete cephalic closure "arrest of the fusion of the cephalic neural folds" [J:12622]
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Allelic Composition: S1pr1tm1Rlp/S1pr1tm1Rlp
Genetic Background: involves: 129S6/SvEvTac * C57BL/6

 MP:0001614 abnormal vasculature "anomalies in the structure of development of the network of tubes that carries blood through the body" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: S1pr1tm1Rlp/S1pr1tm1Rlp
Genetic Background: involves: 129S6/SvEvTac * C57BL/6

 MP:0001879 abnormal lymphatic vessel morphology "malformation of the network of vessels which carries lymph around the body" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8, tc:Teresa Chu , Mouse Genome Informatics Curator]
Show

Allelic Composition: Ndel1tm1Shr/Ndel1tm1Shr
Genetic Background: involves: 129S6/SvEvTac

 MP:0001914 hemorrhage "loss of blood from the vascular compartment to the exterior or into nonvascular body space as a result of rupture or severance of the blood vessels" [Stedman s Medical Dictionary, 27th edition:ISBN 0-683-40008-8]
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Allelic Composition: S1pr1tm1Rlp/S1pr1tm1Rlp
Genetic Background: involves: 129S6/SvEvTac * C57BL/6

Allelic Composition: Sphk1tm1.1Cgh/Sphk1tm2Cgh,Sphk2tm1.1Cgh/Sphk2tm1.1Cgh,Tg(Mx1-cre)1Cgn/0
Genetic Background: involves: 129S4/SvJae * C57BL/6 * CBA

 MP:0001915 intracranial hemorrhage "bleeding within the skull, including hemorrhage into the brain and within the cranial epidural, subdural, and subarachnoid spaces" [MeSH:National Library of Medicine - Medical Subject Headings , 2003]
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Allelic Composition: S1pr1tm1Rlp/S1pr1tm1Rlp
Genetic Background: involves: 129S6/SvEvTac * C57BL/6

 MP:0001917 intraventricular hemorrhage "bleeding into the brain ventricles" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
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Allelic Composition: S1pr1tm1Rlp/S1pr1tm1Rlp
Genetic Background: involves: 129S6/SvEvTac * C57BL/6

 MP:0002145 abnormal T lymphocyte development "atypical production of or inability to produce mature T cells, and/or accumulation of T cell precursors" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: Tsc1tm1Hin/Tsc1+
Genetic Background: involves: 129S4/SvJae * C57BL/6J

 MP:0002169 no phenotype detected "normal, viable and fertile appearance and behavior; indistinguishable from controls" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: Plattm1Mlg/Plattm1Mlg
Genetic Background: B6.Cg-Plattm1Mlg

 MP:0002339 abnormal lymph node morphology "anomalous structure, size, or celluarity of the oval or bean shaped bodies located along the lymphatic system" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator, MeSH:National Library of Medicine - Medical Subject Headings , 2003]
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Allelic Composition: Ndel1tm1Shr/Ndel1tm1Shr
Genetic Background: involves: 129S6/SvEvTac

 MP:0002392 abnormal Peyer s patch T cell area "anomalous structure or development of the Peyer s patch normally occupied by T lymphcytes" [Immunobiology , The Immune System in Health and Disease:ISBN 0-8153-1691-7, cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
Show

Allelic Composition: Ndel1tm1Shr/Ndel1tm1Shr
Genetic Background: involves: 129S6/SvEvTac

 MP:0002723 abnormal immune serum protein physiology "abnormal concentration or function of circulating immune proteins" [cwg:Carroll W. Goldsmith , Mouse Genome Informatics Curator]
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Allelic Composition: Sphk1tm1.1Cgh/Sphk1tm2Cgh,Sphk2tm1.1Cgh/Sphk2tm1.1Cgh,Tg(Mx1-cre)1Cgn/0
Genetic Background: involves: 129S4/SvJae * C57BL/6 * CBA

 MP:0003070 increased vascular permeability "greater or faster ability of the blood vessels to permit the passage of substances such as fluid, heat, or gases" [Stedman s Medical Dictionary, 27th edition:ISBN 0-683-40008-8]
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Allelic Composition: Sphk1tm1.1Cgh/Sphk1tm2Cgh,Sphk2tm1.1Cgh/Sphk2tm1.1Cgh,Tg(Mx1-cre)1Cgn/0
Genetic Background: involves: 129S4/SvJae * C57BL/6 * CBA

 MP:0003156 abnormal lymphocyte migration/homing "altered ability of blood lymphocytes to bind to high endothelial venules (HEV), tether and roll along the luminal aspects of HEV, and migrate into the lymph nodes" [acv:Alicia C. Valenzuela, Mouse Genome Informatics Curator, J:92231]
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Allelic Composition: Lyve1tm1.1(EGFP/cre)Cys/Lyve1+,Sphk1tm2Cgh/Sphk1tm2Cgh,Sphk2tm1.1Cgh/Sphk2tm1.1Cgh
Genetic Background: involves: 129P2/OlaHsd * 129S4/SvJae * C57BL/6

 MP:0004215 abnormal myocardial fiber physiology "anomaly in the function of the multinucleated muscle cells of the heart" [MGI:smb "Susan M. Bello, Mouse Genome Informatics Curator"]
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Allelic Composition: Tsc1tm1Hin/Tsc1+
Genetic Background: involves: 129S4/SvJae * C57BL/6J

 MP:0004261 abnormal embryonic neuroepithelium morphology "any structural anomaly in the epithelial cell layer that lines the neural tube and develops into the nervous system and into the neural crest cells" [ISBN:0838580343 "Kandel ER, et al. Principles of Neural Science, 3rd edition", MGI:monikat "Monika Tomczuk, Mouse Genome Informatics Curator"]
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Allelic Composition: S1pr1tm1Rlp/S1pr1tm1Rlp
Genetic Background: involves: 129S6/SvEvTac * C57BL/6

 MP:0004787 abnormal dorsal aorta morphology "any structural anomaly of the paired arterial structures of the embryo that supplies each developing somite via efferent segmental arteries; the dorsal aortae articulate with the umbilical arteries, which return mixed blood to the villi of the chorion for reoxygenation" [ISBN:0-914294-08-3 "Gray s Anatomy"]
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Allelic Composition: S1pr1tm1Rlp/S1pr1tm1Rlp
Genetic Background: involves: 129S6/SvEvTac * C57BL/6

 MP:0005014 increased B cell number "greater than normal B cell numbers" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
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Allelic Composition: Sulf1Gt(OST352220)Lex/Sulf1Gt(OST352220)Lex,Sulf2Gt(OST311938)Lex/Sulf2Gt(OST311938)Lex
Genetic Background: involves: 129S5/SvEvBrd * C57BL/6N

 MP:0005017 decreased B cell number "fewer than normal B cell numbers" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
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Allelic Composition: Sphk1tm1.1Cgh/Sphk1tm2Cgh,Sphk2tm1.1Cgh/Sphk2tm1.1Cgh,Tg(Mx1-cre)1Cgn/0
Genetic Background: involves: 129S4/SvJae * C57BL/6 * CBA

Allelic Composition: Lyve1tm1.1(EGFP/cre)Cys/Lyve1+,Sphk1tm2Cgh/Sphk1tm2Cgh,Sphk2tm1.1Cgh/Sphk2tm1.1Cgh
Genetic Background: involves: 129P2/OlaHsd * 129S4/SvJae * C57BL/6

 MP:0005018 decreased T cell number "fewer than normal T cell numbers" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
Show

Allelic Composition: Sphk1tm1.1Cgh/Sphk1tm2Cgh,Sphk2tm1.1Cgh/Sphk2tm1.1Cgh,Tg(Mx1-cre)1Cgn/0
Genetic Background: involves: 129S4/SvJae * C57BL/6 * CBA

Allelic Composition: Lyve1tm1.1(EGFP/cre)Cys/Lyve1+,Sphk1tm2Cgh/Sphk1tm2Cgh,Sphk2tm1.1Cgh/Sphk2tm1.1Cgh
Genetic Background: involves: 129P2/OlaHsd * 129S4/SvJae * C57BL/6

 MP:0005244 hemopericardium "bleeding into the pericardial space" [Pathology:ISBN 0-397-51047-0]
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Allelic Composition: S1pr1tm1Rlp/S1pr1tm1Rlp
Genetic Background: involves: 129S6/SvEvTac * C57BL/6

 MP:0005592 abnormal vascular smooth muscle morphology "structural anomaly of the nonstriated, involuntary muscle tissue of the blood vessels" [MeSH:National Library of Medicine - Medical Subject Headings , 2003, cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
Show

Allelic Composition: S1pr1tm1Rlp/S1pr1tm1Rlp
Genetic Background: involves: 129S6/SvEvTac * C57BL/6

 MP:0006054 spinal hemorrhage "bleeding into the spine" [RGD:Rat Genome Database submission, smb:Susan M Bello, Mouse Genome Informatics Curator]
Show

Allelic Composition: S1pr1tm1Rlp/S1pr1tm1Rlp
Genetic Background: involves: 129S6/SvEvTac * C57BL/6

 MP:0006055 abnormal vascular endothelial cell morphology "malformation in the cells that line the vasculature" [smb:Susan M Bello, Mouse Genome Informatics Curator]
Show

Allelic Composition: S1pr1tm1Rlp/S1pr1tm1Rlp
Genetic Background: involves: 129S6/SvEvTac * C57BL/6

 MP:0008044 increased NK cell number "greater number of non-T, non-B lymphocytes, having a granular morphology and which are important in innate immunity to viruses and other intracellular pathogens; in addition, these cells can kill certain tumor cells" [ISBN:0-8153-1691-7 "Immunobiology, The Immune System in Health and Disease"]
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Allelic Composition: Sphk1tm1.1Cgh/Sphk1tm2Cgh,Sphk2tm1.1Cgh/Sphk2tm1.1Cgh,Tg(Mx1-cre)1Cgn/0
Genetic Background: involves: 129S4/SvJae * C57BL/6 * CBA

 MP:0008045 decreased NK cell number "reduction in the number of non-T, non-B lymphocytes, having a granular morphology and which are important in innate immunity to viruses and other intracellular pathogens; in addition, these cells can kill certain tumor cells" [ISBN:0-8153-1691-7 "Immunobiology, The Immune System in Health and Disease"]
Show

Allelic Composition: Sphk1tm1.1Cgh/Sphk1tm2Cgh,Sphk2tm1.1Cgh/Sphk2tm1.1Cgh,Tg(Mx1-cre)1Cgn/0
Genetic Background: involves: 129S4/SvJae * C57BL/6 * CBA

 MP:0008053 abnormal NK cell differentiation "atypical production of or inability to produce the non-T, non-B lymphocytes, having a granular morphology and which are important in innate immunity to viruses and other intracellular pathogens; in addition, these cells can kill certain tumor cells" [ISBN:0-8153-1691-7 "Immunobiology, The Immune System in Health and Disease"]
Show

Allelic Composition: Sphk1tm1.1Cgh/Sphk1tm2Cgh,Sphk2tm1.1Cgh/Sphk2tm1.1Cgh,Tg(Mx1-cre)1Cgn/0
Genetic Background: involves: 129S4/SvJae * C57BL/6 * CBA

 MP:0008466 enlarged mesenteric lymph nodes "increased size of the lymph nodes located in the mesentary, of which there are 3 classes: ileocolic, juxtaintestinal mesenteric, and central superior group" [ISBN:0-683-40008-8 "Stedman s Medical Dictionary, 27th edition"]
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Allelic Composition: CrygcM1Sbao/Crygc+
Genetic Background: involves: BALB/cJ * ICR

 MP:0008713 abnormal cytokine level "deviation from the normal levels of any of the non-antibody proteins made by inflammatory leukocytes and some non-leukocytic cells that affect the behavior of other cells" [ISBN:0-8153-1691-7 "Immunobiology, The Immune System in Health and Disease", MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
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Allelic Composition: CrygcM1Sbao/Crygc+
Genetic Background: involves: BALB/cJ * ICR

 MP:0008734 decreased susceptibility to endotoxin shock "less than the expected early reaction of the microcirculation to endotoxins such as LPS, characterized by movement of fluid and leukocytes from the blood into extravascular tissues and often resulting in death" [MGI:tmeehan "Terry Meehan, Mouse Genome Informatics Curator"]
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Allelic Composition: CrygcM1Sbao/Crygc+
Genetic Background: involves: BALB/cJ * ICR

 MP:0008827 abnormal thymus cell ratio "deviation from the standard ratios of thymocyte subpopulations compared to control samples" [MGI:mberry "Melissa Berry, Genetics Resources Curator"]
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Allelic Composition: Sphk1tm1.1Cgh/Sphk1tm2Cgh,Sphk2tm1.1Cgh/Sphk2tm1.1Cgh,Tg(Mx1-cre)1Cgn/0
Genetic Background: involves: 129S4/SvJae * C57BL/6 * CBA

 MP:0009339 decreased splenocyte number "reduction in the expected number of cells of the spleen" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
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Allelic Composition: Lyve1tm1.1(EGFP/cre)Cys/Lyve1+,Sphk1tm2Cgh/Sphk1tm2Cgh,Sphk2tm1.1Cgh/Sphk2tm1.1Cgh
Genetic Background: involves: 129P2/OlaHsd * 129S4/SvJae * C57BL/6

 MP:0009764 decreased sensitivity to induced morbidity/mortality "increase in the amount of an external agent required to cause death or diseased state" [MGI:smb "Susan M. Bello, Mouse Genome Informatics Curator"]
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Allelic Composition: CrygcM1Sbao/Crygc+
Genetic Background: involves: BALB/cJ * ICR

 MP:0011098 complete embryonic lethality during organogenesis "death of all organisms of a given genotype in a population between embryo turning and the completion of organogenesis (Mus: E9 to less than E14)" [MGI:csmith]
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Allelic Composition: S1pr1tm1Rlp/S1pr1tm1Rlp
Genetic Background: involves: 129S6/SvEvTac * C57BL/6

 MP:0012261 increased hindbrain apoptosis "increase in the number of cells of the hindbrain undergoing programmed cell death" [MGI:anna]
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Allelic Composition: S1pr1tm1Rlp/S1pr1tm1Rlp
Genetic Background: involves: 129S6/SvEvTac * C57BL/6

 MP:0012503 increased midbrain apoptosis "increase in the number of cells of the midbrain undergoing programmed cell death" [MGI:anna]
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Allelic Composition: S1pr1tm1Rlp/S1pr1tm1Rlp
Genetic Background: involves: 129S6/SvEvTac * C57BL/6

 MP:0012676 dilated brain ventricles "the luminal space of one or more of the four communicating cavities within the brain that are continuous with the central canal of the spinal cord is increased in volume or area, usually with an increase in contained fluid" [MGI:anna]
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Allelic Composition: S1pr1tm1Rlp/S1pr1tm1Rlp
Genetic Background: involves: 129S6/SvEvTac * C57BL/6

 MP:0012701 increased embryonic neuroepithelium apoptosis "increase in the number of cells of the embryonic neuroepithelium undergoing programmed cell death" [MGI:anna]
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Allelic Composition: S1pr1tm1Rlp/S1pr1tm1Rlp
Genetic Background: involves: 129S6/SvEvTac * C57BL/6

 MP:0012703 decreased embryonic neuroepithelium thickness "reduced width of the epithelial cell layer that lines the neural tube and develops into the nervous system and into the neural crest cells" [MGI:anna]
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Allelic Composition: S1pr1tm1Rlp/S1pr1tm1Rlp
Genetic Background: involves: 129S6/SvEvTac * C57BL/6

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSMUSG00000021948 Prkcd / P28867 / protein kinase C, delta / Q05655*  / reaction
 ENSMUSG00000029053 Prkcz / Q02956 / protein kinase C, zeta / Q05513*  / reaction
 ENSMUSG00000050965 Prkca / protein kinase C, alpha / P17252*  / reaction
 ENSMUSG00000030265 Kras / P32883 / GTPase KRas GTPase KRas, N-terminally processed / P01116* / KRAS proto-oncogene, GTPase*  / reaction
 ENSMUSG00000025499 Hras / Q61411 / GTPase HRas GTPase HRas, N-terminally processed / P01112* / HRas proto-oncogene, GTPase*  / reaction
 ENSMUSG00000021549 Rasa1 / RAS p21 protein activator 1 / P20936*  / reaction
 ENSMUSG00000052889 Prkcb / P68404 / protein kinase C, beta / P05771*  / reaction






 

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