ENSDARG00000007387


Danio rerio

Features
Gene ID: ENSDARG00000007387
  
Biological name :irf2a
  
Synonyms : interferon regulatory factor 2a / irf2a
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 1
Strand: 1
Band:
Gene start: 39859782
Gene end: 39880189
  
Corresponding Affymetrix probe sets: Dr.21862.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000107609
Ensembl peptide - ENSDARP00000115520
Ensembl peptide - ENSDARP00000123792
NCBI entrez gene - 325410     See in Manteia.
RefSeq - NM_001326712
RefSeq Peptide - NP_001313641
swissprot - F1Q8A2
swissprot - B8JIT5
swissprot - F8W548
ZFIN ID - ZDB-GENE-030131-4135
Ensembl - ENSDARG00000007387
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
irf2 / interferon regulatory factor 2 / P14316* / P23906*ENSDARG0000004046538
irf1b / interferon regulatory factor 1b / IRF1* / P10914* / interferon regulatory factor 1*ENSDARG0000004324931
irf1a / interferon regulatory factor 1aENSDARG0000004349225
irf6 / interferon regulatory factor 6 / O14896* / P97431*ENSDARG0000010198621
irf5 / interferon regulatory factor 5 / P56477* / Q13568*ENSDARG0000004568119
irf8 / interferon regulatory factor 8 / P23611* / Q02556*ENSDARG0000005640719
irf4a / interferon regulatory factor 4a / IRF4* / Q15306* / Q64287* / interferon regulatory factor 4*ENSDARG0000000656018
irf10 / interferon regulatory factor 10ENSDARG0000002765818
irf4b / interferon regulatory factor 4b / IRF4* / Q15306* / Q64287* / interferon regulatory factor 4*ENSDARG0000005537417
irf9 / interferon regulatory factor 9 / Q00978* / Q61179*ENSDARG0000001645716
irf7 / interferon regulatory factor 7 / P70434* / Q92985*ENSDARG0000004566114
irf3 / interferon regulatory factor 3 / P70671* / Q14653*ENSDARG0000007625112


Protein motifs (from Interpro)
Interpro ID Name
 IPR001346  Interferon regulatory factor DNA-binding domain
 IPR011991  ArsR-like helix-turn-helix domain
 IPR017431  Interferon regulatory factor-1/2
 IPR031218  Interferon regulatory factor 2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0008283 cell proliferation IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0044212 transcription regulatory region DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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