ENSDARG00000040465


Danio rerio

Features
Gene ID: ENSDARG00000040465
  
Biological name :irf2
  
Synonyms : interferon regulatory factor 2 / irf2
  
Possible biological names infered from orthology : P14316 / P23906
  
Species: Danio rerio
  
Chr. number: 14
Strand: -1
Band:
Gene start: 4084120
Gene end: 4121052
  
Corresponding Affymetrix probe sets: Dr.16998.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000059229
Ensembl peptide - ENSDARP00000130583
NCBI entrez gene - 494071     See in Manteia.
swissprot - A0A0R4IBK0
swissprot - E7F6T3
ZFIN ID - ZDB-GENE-041212-38
Ensembl - ENSDARG00000040465
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 IRF2ENSGALG00000010642Gallus gallus
 IRF2ENSG00000168310Homo sapiens
 Irf2ENSMUSG00000031627Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
irf2a / interferon regulatory factor 2aENSDARG0000000738751
irf1b / interferon regulatory factor 1b / IRF1* / P10914* / interferon regulatory factor 1*ENSDARG0000004324939
irf1a / interferon regulatory factor 1aENSDARG0000004349235
irf5 / interferon regulatory factor 5 / P56477* / Q13568*ENSDARG0000004568126
irf10 / interferon regulatory factor 10ENSDARG0000002765825
irf4a / interferon regulatory factor 4a / IRF4* / Q15306* / Q64287* / interferon regulatory factor 4*ENSDARG0000000656025
irf6 / interferon regulatory factor 6 / O14896* / P97431*ENSDARG0000010198623
irf8 / interferon regulatory factor 8 / P23611* / Q02556*ENSDARG0000005640723
irf4b / interferon regulatory factor 4b / IRF4* / Q15306* / Q64287* / interferon regulatory factor 4*ENSDARG0000005537423
irf9 / interferon regulatory factor 9 / Q00978* / Q61179*ENSDARG0000001645720
irf7 / interferon regulatory factor 7 / P70434* / Q92985*ENSDARG0000004566118
irf3 / interferon regulatory factor 3 / P70671* / Q14653*ENSDARG0000007625116


Protein motifs (from Interpro)
Interpro ID Name
 IPR001346  Interferon regulatory factor DNA-binding domain
 IPR011991  ArsR-like helix-turn-helix domain
 IPR017431  Interferon regulatory factor-1/2
 IPR019817  Interferon regulatory factor, conserved site
 IPR031218  Interferon regulatory factor 2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0008283 cell proliferation IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0044212 transcription regulatory region DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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