ENSDARG00000014340


Danio rerio

Features
Gene ID: ENSDARG00000014340
  
Biological name :rab11al
  
Synonyms : rab11al / RAB11a, member RAS oncogene family, like
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 16
Strand: 1
Band:
Gene start: 46725087
Gene end: 46741779
  
Corresponding Affymetrix probe sets: Dr.13092.1.A1_at (Zebrafish Array)   Dr.25985.1.A1_at (Zebrafish Array)   NM_200123_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000016540
NCBI entrez gene - 386994     See in Manteia.
RefSeq - NM_200123
RefSeq Peptide - NP_956417
swissprot - F1RDZ1
ZFIN ID - ZDB-GENE-031118-188
Ensembl - ENSDARG00000014340
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
rab11a / RAB11a, member RAS oncogene familyENSDARG0000004145085
rab11bb / RAB11B, member RAS oncogene family, b / RAB11B* / P46638* / Q15907* / RAB11B, member RAS oncogene family*ENSDARG0000009008681
rab11ba / RAB11B, member RAS oncogene family, a / RAB11B* / P46638* / Q15907* / RAB11B, member RAS oncogene family*ENSDARG0000004187881
rab25b / RAB25, member RAS oncogene family b / RAB25* / P57735* / RAB25, member RAS oncogene family*ENSDARG0000005295461
rab25a / RAB25, member RAS oncogene family a / RAB25* / Q9WTL2* / P57735* / RAB25, member RAS oncogene family*ENSDARG0000005880060
rab2a / RAB2A, member RAS oncogene family / P53994* / P61019* / Ras-related protein Rab-2A *ENSDARG0000002026144
rab4b / RAB4B, member RAS oncogene family / Q91ZR1* / P61018* / RAB4B-EGLN2* / RAB4B-EGLN2 readthrough (NMD candidate)*ENSDARG0000001217744
rab14 / RAB14, member RAS oncogene family / P61106* / Q91V41*ENSDARG0000007424644
rab4a / Q6PHI9 / RAB4a, member RAS oncogene family / P56371* / P20338* / Ras-related protein Rab-4A *ENSDARG0000001914443
rab14l / RAB14, member RAS oncogene family, likeENSDARG0000003518842
Q6DHC1 / rab18b / RAB18B, member RAS oncogene family / RAB18* / Q9NP72* / P35293* / RAB18, member RAS oncogene family*ENSDARG0000009834439
rab39bb / RAB39B, member RAS oncogene family b / RAB39B* / Q8BHC1* / Q96DA2* / RAB39B, member RAS oncogene family*ENSDARG0000003650139
rab39ba / RAB39B, member RAS oncogene family a / RAB39B* / Q8BHC1* / Q96DA2* / RAB39B, member RAS oncogene family*ENSDARG0000001931239
rab42a / RAB42, member RAS oncogene family aENSDARG0000003421538
rab18a / RAB18A, member RAS oncogene family / RAB18* / Q9NP72* / P35293* / RAB18, member RAS oncogene family*ENSDARG0000005529137
rab42b / RAB42, member RAS oncogene familyENSDARG0000010117036
CU571310.1 / RAB42* / Q8N4Z0* / RAB42, member RAS oncogene family*ENSDARG0000010258032
si:dkey-34d22.2ENSDARG0000010037928
si:dkey-34d22.5ENSDARG0000010486526
si:ch211-247i17.1ENSDARG0000007672717


Protein motifs (from Interpro)
Interpro ID Name
 IPR001806  Small GTPase superfamily
 IPR005225  Small GTP-binding protein domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006887 exocytosis IBA
 biological_processGO:0032402 melanosome transport IBA
 cellular_componentGO:0055037 recycling endosome IBA
 molecular_functionGO:0003924 GTPase activity IEA
 molecular_functionGO:0005525 GTP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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