Manteia

ENSDARG00000020261

Danio rerio

Features

Gene ID:	ENSDARG00000020261

Biological name :	rab2a

Synonyms :	rab2a / RAB2A, member RAS oncogene family

Possible biological names infered from orthology :	P53994 / P61019 / Ras-related protein Rab-2A

Species:	Danio rerio

Chr. number:	2
Strand:	-1
Band:
Gene start:	21821683
Gene end:	21847935

Corresponding Affymetrix probe sets:	Dr.20914.1.S1_at (Zebrafish Array) NM_201454_at (Zebrafish Genome Array with custom cdf files)

Cross references:	Ensembl peptide - ENSDARP00000003571 NCBI entrez gene - 140617 See in Manteia. RefSeq - NM_201454 RefSeq Peptide - NP_958862 swissprot - Q803J3 ZFIN ID - ZDB-GENE-011212-2 Ensembl - ENSDARG00000020261

See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed

Ortholog prediction (from Ensembl)

Ortholog name	ID	Species
RAB2A	ENSGALG00000015450	Gallus gallus
RAB2A	ENSG00000104388	Homo sapiens
Rab2a	ENSMUSG00000047187	Mus musculus

Paralog prediction (from Ensembl)

Paralog name	ID	Similarity(%)
rab14l / RAB14, member RAS oncogene family, like	ENSDARG00000035188	56
rab14 / RAB14, member RAS oncogene family / P61106* / Q91V41*	ENSDARG00000074246	56
rab4a / Q6PHI9 / RAB4a, member RAS oncogene family / P56371* / P20338* / Ras-related protein Rab-4A *	ENSDARG00000019144	52
rab4b / RAB4B, member RAS oncogene family / Q91ZR1* / P61018* / RAB4B-EGLN2* / RAB4B-EGLN2 readthrough (NMD candidate)*	ENSDARG00000012177	52
rab11ba / RAB11B, member RAS oncogene family, a / RAB11B* / P46638* / Q15907* / RAB11B, member RAS oncogene family*	ENSDARG00000041878	46
rab11bb / RAB11B, member RAS oncogene family, b / RAB11B* / P46638* / Q15907* / RAB11B, member RAS oncogene family*	ENSDARG00000090086	46
rab11al / RAB11a, member RAS oncogene family, like	ENSDARG00000014340	45
rab11a / RAB11a, member RAS oncogene family	ENSDARG00000041450	44
rab42a / RAB42, member RAS oncogene family a	ENSDARG00000034215	43
rab39ba / RAB39B, member RAS oncogene family a / RAB39B* / Q8BHC1* / Q96DA2* / RAB39B, member RAS oncogene family*	ENSDARG00000019312	43
rab39bb / RAB39B, member RAS oncogene family b / RAB39B* / Q8BHC1* / Q96DA2* / RAB39B, member RAS oncogene family*	ENSDARG00000036501	42
Q6DHC1 / rab18b / RAB18B, member RAS oncogene family / RAB18* / Q9NP72* / P35293* / RAB18, member RAS oncogene family*	ENSDARG00000098344	42
rab18a / RAB18A, member RAS oncogene family / RAB18* / Q9NP72* / P35293* / RAB18, member RAS oncogene family*	ENSDARG00000055291	41
rab25a / RAB25, member RAS oncogene family a / RAB25* / Q9WTL2* / P57735* / RAB25, member RAS oncogene family*	ENSDARG00000058800	40
rab25b / RAB25, member RAS oncogene family b / RAB25* / P57735* / RAB25, member RAS oncogene family*	ENSDARG00000052954	40
rab42b / RAB42, member RAS oncogene family	ENSDARG00000101170	34
CU571310.1 / RAB42* / Q8N4Z0* / RAB42, member RAS oncogene family*	ENSDARG00000102580	34
si:dkey-34d22.2	ENSDARG00000100379	33
si:dkey-34d22.5	ENSDARG00000104865	27
si:ch211-247i17.1	ENSDARG00000076727	19

Protein motifs (from Interpro)

Interpro ID	Name
IPR001806	Small GTPase superfamily
IPR005225	Small GTP-binding protein domain
IPR027417	P-loop containing nucleoside triphosphate hydrolase

Gene Ontology (GO)

Type	GO ID	Term	Ev.Code
cellular_component	GO:0005794	Golgi apparatus	IBA
molecular_function	GO:0003924	GTPase activity	IEA
molecular_function	GO:0005525	GTP binding	IEA

Pathways (from Reactome)

Pathway description

Golgi Cisternae Pericentriolar Stack Reorganization

RAB geranylgeranylation

Phenotype (from MGI, Zfin or HPO)

Phenotype

Definition

Genetic BG

No match

Interacting proteins (from Reactome)

Interactor ID	Name	Interaction type
ENSDARG00000011299	blzf1 / basic leucine zipper nuclear factor 1 / Q8R2X8* / Q9H2G9* / Golgin-45 *	/ complex

1 s.

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		© Olivier Tassy / Olivier Pourquie 2007-2024 contact: otassy@igbmc.fr