Manteia

ENSDARG00000036501

Danio rerio

Features

Gene ID:	ENSDARG00000036501

Biological name :	rab39bb

Synonyms :	rab39bb / RAB39B, member RAS oncogene family b

Possible biological names infered from orthology :	Q8BHC1 / Q96DA2 / RAB39B / RAB39B, member RAS oncogene family

Species:	Danio rerio

Chr. number:	7
Strand:	1
Band:
Gene start:	23875269
Gene end:	23884894

Corresponding Affymetrix probe sets:

Cross references:	Ensembl peptide - ENSDARP00000092180 NCBI entrez gene - 566010 See in Manteia. swissprot - A1A5H9 ZFIN ID - ZDB-GENE-061215-104 Ensembl - ENSDARG00000036501

See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed

Ortholog prediction (from Ensembl)

Ortholog name	ID	Species
RAB39B	ENSGALG00000040784	Gallus gallus
Q96DA2	ENSG00000155961	Homo sapiens
Q8BHC1	ENSMUSG00000031202	Mus musculus

Paralog prediction (from Ensembl)

Paralog name	ID	Similarity(%)
rab39ba / RAB39B, member RAS oncogene family a / RAB39B* / Q8BHC1* / Q96DA2* / RAB39B, member RAS oncogene family*	ENSDARG00000019312	96
rab42a / RAB42, member RAS oncogene family a	ENSDARG00000034215	60
rab42b / RAB42, member RAS oncogene family	ENSDARG00000101170	52
CU571310.1 / RAB42* / Q8N4Z0* / RAB42, member RAS oncogene family*	ENSDARG00000102580	43
rab2a / RAB2A, member RAS oncogene family / P53994* / P61019* / Ras-related protein Rab-2A *	ENSDARG00000020261	42
rab11al / RAB11a, member RAS oncogene family, like	ENSDARG00000014340	40
rab4b / RAB4B, member RAS oncogene family / Q91ZR1* / P61018* / RAB4B-EGLN2* / RAB4B-EGLN2 readthrough (NMD candidate)*	ENSDARG00000012177	40
rab25a / RAB25, member RAS oncogene family a / RAB25* / Q9WTL2* / P57735* / RAB25, member RAS oncogene family*	ENSDARG00000058800	39
rab11bb / RAB11B, member RAS oncogene family, b / RAB11B* / P46638* / Q15907* / RAB11B, member RAS oncogene family*	ENSDARG00000090086	39
rab11a / RAB11a, member RAS oncogene family	ENSDARG00000041450	39
rab4a / Q6PHI9 / RAB4a, member RAS oncogene family / P56371* / P20338* / Ras-related protein Rab-4A *	ENSDARG00000019144	38
rab11ba / RAB11B, member RAS oncogene family, a / RAB11B* / P46638* / Q15907* / RAB11B, member RAS oncogene family*	ENSDARG00000041878	38
rab14l / RAB14, member RAS oncogene family, like	ENSDARG00000035188	38
rab14 / RAB14, member RAS oncogene family / P61106* / Q91V41*	ENSDARG00000074246	37
rab25b / RAB25, member RAS oncogene family b / RAB25* / P57735* / RAB25, member RAS oncogene family*	ENSDARG00000052954	37
si:dkey-34d22.2	ENSDARG00000100379	36
si:dkey-34d22.5	ENSDARG00000104865	35
Q6DHC1 / rab18b / RAB18B, member RAS oncogene family / RAB18* / Q9NP72* / P35293* / RAB18, member RAS oncogene family*	ENSDARG00000098344	33
rab18a / RAB18A, member RAS oncogene family / RAB18* / Q9NP72* / P35293* / RAB18, member RAS oncogene family*	ENSDARG00000055291	32
si:ch211-247i17.1	ENSDARG00000076727	18

Protein motifs (from Interpro)

Interpro ID	Name
IPR001806	Small GTPase superfamily
IPR005225	Small GTP-binding protein domain
IPR027417	P-loop containing nucleoside triphosphate hydrolase

Gene Ontology (GO)

Type	GO ID	Term	Ev.Code
cellular_component	GO:0005794	Golgi apparatus	IBA
molecular_function	GO:0003924	GTPase activity	IEA
molecular_function	GO:0005525	GTP binding	IEA

Pathways (from Reactome)

Pathway description

RAB geranylgeranylation

Phenotype (from MGI, Zfin or HPO)

Phenotype

Definition

Genetic BG

No match

Interacting proteins (from Reactome)

Interactor ID

Name

Interaction type

No match

0 s.

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		© Olivier Tassy / Olivier Pourquie 2007-2024 contact: otassy@igbmc.fr