Manteia

ENSDARG00000019312

Danio rerio

Features

Gene ID:	ENSDARG00000019312

Biological name :	rab39ba

Synonyms :	rab39ba / RAB39B, member RAS oncogene family a

Possible biological names infered from orthology :	Q8BHC1 / Q96DA2 / RAB39B / RAB39B, member RAS oncogene family

Species:	Danio rerio

Chr. number:	21
Strand:	-1
Band:
Gene start:	30540465
Gene end:	30545121

Corresponding Affymetrix probe sets:

Cross references:	Ensembl peptide - ENSDARP00000020538 NCBI entrez gene - 562596 See in Manteia. RefSeq - NM_001098741 RefSeq Peptide - NP_001092211 swissprot - A5PLA1 ZFIN ID - ZDB-GENE-070620-7 Ensembl - ENSDARG00000019312

See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed

Ortholog prediction (from Ensembl)

Ortholog name	ID	Species
RAB39B	ENSGALG00000040784	Gallus gallus
Q96DA2	ENSG00000155961	Homo sapiens
Q8BHC1	ENSMUSG00000031202	Mus musculus

Paralog prediction (from Ensembl)

Paralog name	ID	Similarity(%)
rab39bb / RAB39B, member RAS oncogene family b / RAB39B* / Q8BHC1* / Q96DA2* / RAB39B, member RAS oncogene family*	ENSDARG00000036501	96
rab42a / RAB42, member RAS oncogene family a	ENSDARG00000034215	59
rab42b / RAB42, member RAS oncogene family	ENSDARG00000101170	52
rab2a / RAB2A, member RAS oncogene family / P53994* / P61019* / Ras-related protein Rab-2A *	ENSDARG00000020261	43
CU571310.1 / RAB42* / Q8N4Z0* / RAB42, member RAS oncogene family*	ENSDARG00000102580	42
rab4b / RAB4B, member RAS oncogene family / Q91ZR1* / P61018* / RAB4B-EGLN2* / RAB4B-EGLN2 readthrough (NMD candidate)*	ENSDARG00000012177	40
rab11al / RAB11a, member RAS oncogene family, like	ENSDARG00000014340	39
rab11bb / RAB11B, member RAS oncogene family, b / RAB11B* / P46638* / Q15907* / RAB11B, member RAS oncogene family*	ENSDARG00000090086	39
rab25a / RAB25, member RAS oncogene family a / RAB25* / Q9WTL2* / P57735* / RAB25, member RAS oncogene family*	ENSDARG00000058800	39
rab11ba / RAB11B, member RAS oncogene family, a / RAB11B* / P46638* / Q15907* / RAB11B, member RAS oncogene family*	ENSDARG00000041878	38
rab14 / RAB14, member RAS oncogene family / P61106* / Q91V41*	ENSDARG00000074246	38
rab14l / RAB14, member RAS oncogene family, like	ENSDARG00000035188	38
rab11a / RAB11a, member RAS oncogene family	ENSDARG00000041450	38
rab4a / Q6PHI9 / RAB4a, member RAS oncogene family / P56371* / P20338* / Ras-related protein Rab-4A *	ENSDARG00000019144	38
rab25b / RAB25, member RAS oncogene family b / RAB25* / P57735* / RAB25, member RAS oncogene family*	ENSDARG00000052954	37
si:dkey-34d22.2	ENSDARG00000100379	36
Q6DHC1 / rab18b / RAB18B, member RAS oncogene family / RAB18* / Q9NP72* / P35293* / RAB18, member RAS oncogene family*	ENSDARG00000098344	33
si:dkey-34d22.5	ENSDARG00000104865	33
rab18a / RAB18A, member RAS oncogene family / RAB18* / Q9NP72* / P35293* / RAB18, member RAS oncogene family*	ENSDARG00000055291	32
si:ch211-247i17.1	ENSDARG00000076727	18

Protein motifs (from Interpro)

Interpro ID	Name
IPR001806	Small GTPase superfamily
IPR005225	Small GTP-binding protein domain
IPR027417	P-loop containing nucleoside triphosphate hydrolase

Gene Ontology (GO)

Type	GO ID	Term	Ev.Code
cellular_component	GO:0005794	Golgi apparatus	IBA
molecular_function	GO:0003924	GTPase activity	IEA
molecular_function	GO:0005525	GTP binding	IEA

Pathways (from Reactome)

Pathway description

RAB geranylgeranylation

Phenotype (from MGI, Zfin or HPO)

Phenotype

Definition

Genetic BG

No match

Interacting proteins (from Reactome)

Interactor ID

Name

Interaction type

No match

0 s.

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		© Olivier Tassy / Olivier Pourquie 2007-2024 contact: otassy@igbmc.fr