ENSDARG00000014462


Danio rerio

Features
Gene ID: ENSDARG00000014462
  
Biological name :rab3c
  
Synonyms : rab3c / RAB3C, member RAS oncogene family
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 8
Strand: -1
Band:
Gene start: 17055292
Gene end: 17067364
  
Corresponding Affymetrix probe sets: Dr.9359.1.A1_at (Zebrafish Array)   NM_001002530_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000153031
Ensembl peptide - ENSDARP00000114513
NCBI entrez gene - 436803     See in Manteia.
RefSeq - NM_001002530
RefSeq - XM_005166825
RefSeq Peptide - NP_001002530
swissprot - Q6DGH8
swissprot - A8WHV3
ZFIN ID - ZDB-GENE-040718-263
Ensembl - ENSDARG00000014462
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
rab3ab / RAB3A, member RAS oncogene family, b / RAB3A* / P63011* / P20336* / RAB3A, member RAS oncogene family*ENSDARG0000004383577
rab3aa / RAB3A, member RAS oncogene family, a / RAB3A* / P63011* / P20336* / RAB3A, member RAS oncogene family*ENSDARG0000005634774
rab3b / RAB3B, member RAS oncogene family / RAB3C* / Q9CZT8* / P20337* / P62823* / Q96E17* / RAB3C, member RAS oncogene family*ENSDARG0000011479772
rab3da / RAB3D, member RAS oncogene family, a / RAB3D* / P35276* / O95716* / RAB3D, member RAS oncogene family*ENSDARG0000001810772
rab3db / RAB3D, member RAS oncogene family, b / RAB3D* / P35276* / O95716* / RAB3D, member RAS oncogene family*ENSDARG0000010153468
rab8a / RAB8A, member RAS oncogene family / P55258* / P61006*ENSDARG0000006792047
rab13 / Q7T3A4 / RAB13, member RAS oncogene family / Q9DD03* / P51153* / Ras-related protein Rab-13 *ENSDARG0000003477143
rab8b / RAB8B, member RAS oncogene family / P61028* / Q92930*ENSDARG0000006862843
rab27a / RAB27A, member RAS oncogene family / P51159*ENSDARG0000010393542
megf8 / multiple EGF-like-domains 8ENSDARG0000010393442
rab10 / RAB10, member RAS oncogene family / P61026*ENSDARG0000004610642
rab12 / RAB12, member RAS oncogene family / Q6IQ22*ENSDARG0000008942841
rab15 / RAB15, member RAS oncogene family / P59190*ENSDARG0000002648438
rab27b / RAB27B, member RAS oncogene family / O00194* / Q99P58*ENSDARG0000008776238
rab44 / RAB44, member RAS oncogene family / Q8CB87* / Ras-related protein Rab-44 *ENSDARG0000002838933
rasef / RAS and EF-hand domain containing / Q5RI75* / Q8IZ41* / Ras and EF-hand domain-containing protein homolog *ENSDARG0000007625031
A5WW21 / zgc:162879ENSDARG0000007416330


Protein motifs (from Interpro)
Interpro ID Name
 IPR001806  Small GTPase superfamily
 IPR005225  Small GTP-binding protein domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0003924 GTPase activity IEA
 molecular_functionGO:0005525 GTP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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