Manteia

ENSDARG00000101534

Danio rerio

Features

Gene ID:	ENSDARG00000101534

Biological name :	rab3db

Synonyms :	rab3db / RAB3D, member RAS oncogene family, b

Possible biological names infered from orthology :	O95716 / P35276 / RAB3D / RAB3D, member RAS oncogene family

Species:	Danio rerio

Chr. number:	3
Strand:	1
Band:
Gene start:	14512670
Gene end:	14537576

Corresponding Affymetrix probe sets:

Cross references:	Ensembl peptide - ENSDARP00000140965 NCBI entrez gene - 436952 See in Manteia. RefSeq - NM_001002679 RefSeq Peptide - NP_001002679 swissprot - Q6DI07 ZFIN ID - ZDB-GENE-040718-428 Ensembl - ENSDARG00000101534

See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed

Ortholog prediction (from Ensembl)

Ortholog name	ID	Species
RAB3D	ENSG00000105514	Homo sapiens
Rab3d	ENSMUSG00000019066	Mus musculus

Paralog prediction (from Ensembl)

Paralog name	ID	Similarity(%)
rab3da / RAB3D, member RAS oncogene family, a / RAB3D* / P35276* / O95716* / RAB3D, member RAS oncogene family*	ENSDARG00000018107	82
rab3ab / RAB3A, member RAS oncogene family, b / RAB3A* / P63011* / P20336* / RAB3A, member RAS oncogene family*	ENSDARG00000043835	72
rab3aa / RAB3A, member RAS oncogene family, a / RAB3A* / P63011* / P20336* / RAB3A, member RAS oncogene family*	ENSDARG00000056347	72
rab3c / RAB3C, member RAS oncogene family	ENSDARG00000014462	70
rab3b / RAB3B, member RAS oncogene family / RAB3C* / Q9CZT8* / P20337* / P62823* / Q96E17* / RAB3C, member RAS oncogene family*	ENSDARG00000114797	69
rab10 / RAB10, member RAS oncogene family / P61026*	ENSDARG00000046106	42
rab8a / RAB8A, member RAS oncogene family / P55258* / P61006*	ENSDARG00000067920	42
rab12 / RAB12, member RAS oncogene family / Q6IQ22*	ENSDARG00000089428	42
rab13 / Q7T3A4 / RAB13, member RAS oncogene family / Q9DD03* / P51153* / Ras-related protein Rab-13 *	ENSDARG00000034771	41
rab27a / RAB27A, member RAS oncogene family / P51159*	ENSDARG00000103935	41
megf8 / multiple EGF-like-domains 8	ENSDARG00000103934	40
rab8b / RAB8B, member RAS oncogene family / P61028* / Q92930*	ENSDARG00000068628	40
rab27b / RAB27B, member RAS oncogene family / O00194* / Q99P58*	ENSDARG00000087762	39
rab15 / RAB15, member RAS oncogene family / P59190*	ENSDARG00000026484	37
rasef / RAS and EF-hand domain containing / Q5RI75* / Q8IZ41* / Ras and EF-hand domain-containing protein homolog *	ENSDARG00000076250	33
rab44 / RAB44, member RAS oncogene family / Q8CB87* / Ras-related protein Rab-44 *	ENSDARG00000028389	32
A5WW21 / zgc:162879	ENSDARG00000074163	30

Protein motifs (from Interpro)

Interpro ID	Name
IPR001806	Small GTPase superfamily
IPR005225	Small GTP-binding protein domain
IPR027417	P-loop containing nucleoside triphosphate hydrolase

Gene Ontology (GO)

Type	GO ID	Term	Ev.Code
molecular_function	GO:0003924	GTPase activity	IEA
molecular_function	GO:0005525	GTP binding	IEA

Pathways (from Reactome)

Pathway description

Neutrophil degranulation

RAB geranylgeranylation

Phenotype (from MGI, Zfin or HPO)

Phenotype

Definition

Genetic BG

No match

Interacting proteins (from Reactome)

Interactor ID

Name

Interaction type

No match

1 s.

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		© Olivier Tassy / Olivier Pourquie 2007-2024 contact: otassy@igbmc.fr