ENSDARG00000074163


Danio rerio

Features
Gene ID: ENSDARG00000074163
  
Biological name :zgc:162879
  
Synonyms : A5WW21 / zgc:162879
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 18
Strand: -1
Band:
Gene start: 25754838
Gene end: 25771553
  
Corresponding Affymetrix probe sets: Dr.20468.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000093820
NCBI entrez gene - 572256     See in Manteia.
RefSeq - NM_001089427
RefSeq Peptide - NP_001082896
swissprot - A5WW21
ZFIN ID - ZDB-GENE-070424-92
Ensembl - ENSDARG00000074163
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000046488Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
rasef / RAS and EF-hand domain containing / Q5RI75* / Q8IZ41* / Ras and EF-hand domain-containing protein homolog *ENSDARG0000007625038
rab44 / RAB44, member RAS oncogene family / Q8CB87* / Ras-related protein Rab-44 *ENSDARG0000002838918
rab8b / RAB8B, member RAS oncogene family / P61028* / Q92930*ENSDARG0000006862812
rab8a / RAB8A, member RAS oncogene family / P55258* / P61006*ENSDARG0000006792012
rab12 / RAB12, member RAS oncogene family / Q6IQ22*ENSDARG0000008942811
rab27b / RAB27B, member RAS oncogene family / O00194* / Q99P58*ENSDARG0000008776211
rab27a / RAB27A, member RAS oncogene family / P51159*ENSDARG0000010393511
rab10 / RAB10, member RAS oncogene family / P61026*ENSDARG0000004610611
rab15 / RAB15, member RAS oncogene family / P59190*ENSDARG0000002648411
megf8 / multiple EGF-like-domains 8ENSDARG0000010393411
rab3c / RAB3C, member RAS oncogene familyENSDARG0000001446210
rab3da / RAB3D, member RAS oncogene family, a / RAB3D* / P35276* / O95716* / RAB3D, member RAS oncogene family*ENSDARG0000001810710
rab3b / RAB3B, member RAS oncogene family / RAB3C* / Q9CZT8* / P20337* / P62823* / Q96E17* / RAB3C, member RAS oncogene family*ENSDARG0000011479710
rab3aa / RAB3A, member RAS oncogene family, a / RAB3A* / P63011* / P20336* / RAB3A, member RAS oncogene family*ENSDARG0000005634710
rab3ab / RAB3A, member RAS oncogene family, b / RAB3A* / P63011* / P20336* / RAB3A, member RAS oncogene family*ENSDARG0000004383510
rab13 / Q7T3A4 / RAB13, member RAS oncogene family / Q9DD03* / P51153* / Ras-related protein Rab-13 *ENSDARG0000003477110
rab3db / RAB3D, member RAS oncogene family, b / RAB3D* / P35276* / O95716* / RAB3D, member RAS oncogene family*ENSDARG0000010153410


Protein motifs (from Interpro)
Interpro ID Name
 IPR001806  Small GTPase superfamily
 IPR002048  EF-hand domain
 IPR005225  Small GTP-binding protein domain
 IPR011992  EF-hand domain pair
 IPR018247  EF-Hand 1, calcium-binding site
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0048471 perinuclear region of cytoplasm IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003924 GTPase activity IEA
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0005525 GTP binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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