ENSDARG00000043835


Danio rerio

Features
Gene ID: ENSDARG00000043835
  
Biological name :rab3ab
  
Synonyms : rab3ab / RAB3A, member RAS oncogene family, b
  
Possible biological names infered from orthology : P20336 / P63011 / RAB3A / RAB3A, member RAS oncogene family
  
Species: Danio rerio
  
Chr. number: 11
Strand: 1
Band:
Gene start: 6819050
Gene end: 6850593
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000095064
NCBI entrez gene - 550457     See in Manteia.
RefSeq - NM_001017761
RefSeq Peptide - NP_001017761
swissprot - Q5RGB5
ZFIN ID - ZDB-GENE-041210-268
Ensembl - ENSDARG00000043835
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RAB3AENSGALG00000030068Gallus gallus
 RAB3AENSG00000105649Homo sapiens
 Rab3aENSMUSG00000031840Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
rab3aa / RAB3A, member RAS oncogene family, a / RAB3A* / P63011* / P20336* / RAB3A, member RAS oncogene family*ENSDARG0000005634788
rab3c / RAB3C, member RAS oncogene familyENSDARG0000001446279
rab3da / RAB3D, member RAS oncogene family, a / RAB3D* / P35276* / O95716* / RAB3D, member RAS oncogene family*ENSDARG0000001810776
rab3b / RAB3B, member RAS oncogene family / RAB3C* / Q9CZT8* / P20337* / P62823* / Q96E17* / RAB3C, member RAS oncogene family*ENSDARG0000011479774
rab3db / RAB3D, member RAS oncogene family, b / RAB3D* / P35276* / O95716* / RAB3D, member RAS oncogene family*ENSDARG0000010153472
rab8a / RAB8A, member RAS oncogene family / P55258* / P61006*ENSDARG0000006792044
rab10 / RAB10, member RAS oncogene family / P61026*ENSDARG0000004610642
rab8b / RAB8B, member RAS oncogene family / P61028* / Q92930*ENSDARG0000006862842
rab27a / RAB27A, member RAS oncogene family / P51159*ENSDARG0000010393542
rab12 / RAB12, member RAS oncogene family / Q6IQ22*ENSDARG0000008942841
megf8 / multiple EGF-like-domains 8ENSDARG0000010393441
rab13 / Q7T3A4 / RAB13, member RAS oncogene family / Q9DD03* / P51153* / Ras-related protein Rab-13 *ENSDARG0000003477141
rab15 / RAB15, member RAS oncogene family / P59190*ENSDARG0000002648437
rab27b / RAB27B, member RAS oncogene family / O00194* / Q99P58*ENSDARG0000008776237
rasef / RAS and EF-hand domain containing / Q5RI75* / Q8IZ41* / Ras and EF-hand domain-containing protein homolog *ENSDARG0000007625031
rab44 / RAB44, member RAS oncogene family / Q8CB87* / Ras-related protein Rab-44 *ENSDARG0000002838931
A5WW21 / zgc:162879ENSDARG0000007416329


Protein motifs (from Interpro)
Interpro ID Name
 IPR001806  Small GTPase superfamily
 IPR005225  Small GTP-binding protein domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0003924 GTPase activity IEA
 molecular_functionGO:0005525 GTP binding IEA


Pathways (from Reactome)
Pathway description
Glutamate Neurotransmitter Release Cycle
Acetylcholine Neurotransmitter Release Cycle
Neutrophil degranulation
RAB geranylgeranylation
RAB GEFs exchange GTP for GDP on RABs
GABA synthesis, release, reuptake and degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000006356 Q08C75 / slc18a3a / solute carrier family 18 (vesicular acetylcholine transporter), member 3a / Q16572* / SLC18A3* / solute carrier family 18 member A3*  / reaction / complex
 ENSDARG00000030614 syt1a / synaptotagmin Ia / SYT1* / P46096* / P21579* / synaptotagmin 1* / synaptotagmin I*  / complex
 ENSDARG00000042350 syt1b / synaptotagmin Ib / SYT1* / P46096* / P21579* / synaptotagmin 1* / synaptotagmin I*  / complex
 ENSDARG00000090106 slc17a7b / solute carrier family 17 (vesicular glutamate transporter), member 7b / Q9P2U7* / Q3TXX4* / SLC17A7* / solute carrier family 17 member 7* / Vesicular glutamate transporter 1 *  / complex
 ENSDARG00000056122 gdi1 / GDP dissociation inhibitor 1 / P31150* / P50396* / Rab GDP dissociation inhibitor alpha *  / complex
 ENSDARG00000016480 slc17a7a / solute carrier family 17 (vesicular glutamate transporter), member 7a / Q9P2U7* / Q3TXX4* / SLC17A7* / solute carrier family 17 member 7* / Vesicular glutamate transporter 1 *  / complex






 

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