ENSDARG00000076250


Danio rerio

Features
Gene ID: ENSDARG00000076250
  
Biological name :rasef
  
Synonyms : RAS and EF-hand domain containing / rasef
  
Possible biological names infered from orthology : Q5RI75 / Q8IZ41 / Ras and EF-hand domain-containing protein homolog
  
Species: Danio rerio
  
Chr. number: 8
Strand: 1
Band:
Gene start: 49570884
Gene end: 49606121
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000102663
Ensembl peptide - ENSDARP00000154931
NCBI entrez gene - 570731     See in Manteia.
swissprot - B8JLE6
ZFIN ID - ZDB-GENE-081105-157
Ensembl - ENSDARG00000076250
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RASEFENSGALG00000012576Gallus gallus
 RASEFENSG00000165105Homo sapiens
 RasefENSMUSG00000043003Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
A5WW21 / zgc:162879ENSDARG0000007416336
rab44 / RAB44, member RAS oncogene family / Q8CB87* / Ras-related protein Rab-44 *ENSDARG0000002838917
rab3db / RAB3D, member RAS oncogene family, b / RAB3D* / P35276* / O95716* / RAB3D, member RAS oncogene family*ENSDARG0000010153410
rab27b / RAB27B, member RAS oncogene family / O00194* / Q99P58*ENSDARG0000008776210
rab3ab / RAB3A, member RAS oncogene family, b / RAB3A* / P63011* / P20336* / RAB3A, member RAS oncogene family*ENSDARG0000004383510
rab3aa / RAB3A, member RAS oncogene family, a / RAB3A* / P63011* / P20336* / RAB3A, member RAS oncogene family*ENSDARG0000005634710
rab3da / RAB3D, member RAS oncogene family, a / RAB3D* / P35276* / O95716* / RAB3D, member RAS oncogene family*ENSDARG0000001810710
rab3c / RAB3C, member RAS oncogene familyENSDARG0000001446210
rab10 / RAB10, member RAS oncogene family / P61026*ENSDARG0000004610610
megf8 / multiple EGF-like-domains 8ENSDARG0000010393410
rab8b / RAB8B, member RAS oncogene family / P61028* / Q92930*ENSDARG0000006862810
rab12 / RAB12, member RAS oncogene family / Q6IQ22*ENSDARG0000008942810
rab8a / RAB8A, member RAS oncogene family / P55258* / P61006*ENSDARG0000006792010
rab27a / RAB27A, member RAS oncogene family / P51159*ENSDARG0000010393510
rab15 / RAB15, member RAS oncogene family / P59190*ENSDARG0000002648410
rab3b / RAB3B, member RAS oncogene family / RAB3C* / Q9CZT8* / P20337* / P62823* / Q96E17* / RAB3C, member RAS oncogene family*ENSDARG000001147979
rab13 / Q7T3A4 / RAB13, member RAS oncogene family / Q9DD03* / P51153* / Ras-related protein Rab-13 *ENSDARG000000347719


Protein motifs (from Interpro)
Interpro ID Name
 IPR001806  Small GTPase superfamily
 IPR002048  EF-hand domain
 IPR005225  Small GTP-binding protein domain
 IPR011992  EF-hand domain pair
 IPR018247  EF-Hand 1, calcium-binding site
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0003924 GTPase activity IEA
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0005525 GTP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr