ENSMUSG00000043003


Mus musculus

Features
Gene ID: ENSMUSG00000043003
  
Biological name :Rasef
  
Synonyms : Q5RI75 / Ras and EF-hand domain-containing protein homolog / Rasef
  
Possible biological names infered from orthology : Q8IZ41 / RAS and EF-hand domain containing
  
Species: Mus musculus
  
Chr. number: 4
Strand: -1
Band: C3
Gene start: 73714579
Gene end: 73790994
  
Corresponding Affymetrix probe sets: 10513922 (MoGene1.0st)   10513943 (MoGene1.0st)   1458591_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000062771
Ensembl peptide - ENSMUSP00000099901
Ensembl peptide - ENSMUSP00000152127
NCBI entrez gene - 242505     See in Manteia.
MGI - MGI:2448565
RefSeq - XM_017320201
RefSeq - NM_001017427
RefSeq - XM_006537926
RefSeq - XM_006537927
RefSeq - XM_011250042
RefSeq Peptide - NP_001017427
swissprot - Q5RI75
swissprot - A0A1Y7VIT3
Ensembl - ENSMUSG00000043003
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rasefENSDARG00000076250Danio rerio
 RASEFENSGALG00000012576Gallus gallus
 RASEFENSG00000165105Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Rab44 / Q8CB87 / Ras-related protein Rab-44 / RAB44, member RAS oncogene family*ENSMUSG0000006414722
Rab12 / P35283 / Ras-related protein Rab-12 / Q6IQ22* / RAB12, member RAS oncogene family*ENSMUSG0000002346013
Q99P58 / Rab27b / RAB27B, member RAS oncogene family / O00194*ENSMUSG0000002451112
Rab3b / Q9CZT8 / RAB3B, member RAS oncogene family / P20337*ENSMUSG0000000341112
Rab8b / P61028 / RAB8B, member RAS oncogene family / Q92930*ENSMUSG0000003694312
Rab3a / P63011 / RAB3A, member RAS oncogene family / P20336*ENSMUSG0000003184012
Rab3c / P62823 / RAB3C, member RAS oncogene family / Q96E17*ENSMUSG0000002170012
Q9ERI2 / Rab27a / RAB27A, member RAS oncogene family / P51159*ENSMUSG0000003220212
Rab8a / P55258 / RAB8A, member RAS oncogene family / P61006*ENSMUSG0000000303712
Rab15 / RAB15, member RAS oncogene family / P59190*ENSMUSG0000002106211
Rab10 / P61027 / RAB10, member RAS oncogene family / P61026*ENSMUSG0000002067111
Rab13 / Q9DD03 / Ras-related protein Rab-13 / P51153* / RAB13, member RAS oncogene family*ENSMUSG0000002793511
Rab3d / P35276 / RAB3D, member RAS oncogene family / O95716*ENSMUSG0000001906611


Protein motifs (from Interpro)
Interpro ID Name
 IPR001806  Small GTPase superfamily
 IPR002048  EF-hand domain
 IPR005225  Small GTP-binding protein domain
 IPR011992  EF-hand domain pair
 IPR018247  EF-Hand 1, calcium-binding site
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0051260 protein homooligomerization ISO
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol ISO
 cellular_componentGO:0048471 perinuclear region of cytoplasm IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003924 GTPase activity IEA
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0005525 GTP binding IEA
 molecular_functionGO:0019003 GDP binding ISO
 molecular_functionGO:0042802 identical protein binding ISO


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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