ENSDARG00000042357


Danio rerio

Features
Gene ID: ENSDARG00000042357
  
Biological name :cldnk
  
Synonyms : claudin k / cldnk
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 3
Strand: -1
Band:
Gene start: 50123507
Gene end: 50127668
  
Corresponding Affymetrix probe sets: Dr.13086.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000062115
Ensembl peptide - ENSDARP00000146175
NCBI entrez gene - 445070     See in Manteia.
swissprot - Q6DBT9
ZFIN ID - ZDB-GENE-040801-201
Ensembl - ENSDARG00000042357
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cldne / claudin e / CLDN4* / O14493* / O35054* / claudin 4*ENSDARG0000004312851
cldnb / claudin b / CLDN4* / O14493* / O35054* / claudin 4*ENSDARG0000000954451
cldna / claudin a / CLDN4* / O14493* / O35054* / claudin 4*ENSDARG0000006988851
cldnd / Q9YH91 / claudin d / CLDN4* / O14493* / O35054* / claudin 4*ENSDARG0000000658050
zgc:112437 / CLDN4 (1 of many) / CLDN4* / O14493* / O35054* / claudin 4*ENSDARG0000000921549
cldnc / claudin c / CLDN4* / O14493* / O35054* / claudin 4*ENSDARG0000001595548
cldng / Q9YH90 / claudin g / CLDN4* / O14493* / O35054* / claudin 4*ENSDARG0000000370147
cldn5a / claudin 5a / CLDN5* / O00501* / O54942* / claudin 5*ENSDARG0000004371646
cldnh / claudin h / CLDN4* / O14493* / O35054* / claudin 4*ENSDARG0000006950345
cldnj / claudin jENSDARG0000005888043
cldn5b / claudin 5b / CLDN5* / O00501* / O54942* / claudin 5*ENSDARG0000001405942
cldn17 / claudin 17 / CLDN8* / P56748* / claudin 8*ENSDARG0000009995041
zgc:136892 / CLDN4 (1 of many) / CLDN4* / O14493* / O35054* / claudin 4*ENSDARG0000006950540
cldnf / claudin f / CLDN4* / O14493* / O35054* / claudin 4*ENSDARG0000004313340
Q9YH92 / cldn7b / claudin 7b / CLDN7* / Q9Z261* / O95471* / claudin 7*ENSDARG0000001404738
cldn1 / claudin 1 / O95832*ENSDARG0000004004538
zgc:110333 / CLDN8 (1 of many) / CLDN8* / P56748* / claudin 8*ENSDARG0000004062838
Q6DHP1 / cldn7a / claudin 7a / CLDN7* / Q9Z261* / O95471* / claudin 7*ENSDARG0000003637637
cldn2 / claudin 2 / O88552* / P57739*ENSDARG0000004438736
cldn19 / claudin 19 / Q8N6F1* / Q9ET38*ENSDARG0000004456934


Protein motifs (from Interpro)
Interpro ID Name
 IPR004031  PMP-22/EMP/MP20/Claudin superfamily
 IPR006187  Claudin
 IPR017974  Claudin, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005923 bicellular tight junction IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030054 cell junction IEA
 molecular_functionGO:0005198 structural molecule activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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