ENSDARG00000014059


Danio rerio

Features
Gene ID: ENSDARG00000014059
  
Biological name :cldn5b
  
Synonyms : claudin 5b / cldn5b
  
Possible biological names infered from orthology : claudin 5 / CLDN5 / O00501 / O54942
  
Species: Danio rerio
  
Chr. number: 10
Strand: 1
Band:
Gene start: 43994471
Gene end: 43996117
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000116125
Ensembl peptide - ENSDARP00000148704
NCBI entrez gene - 450023     See in Manteia.
RefSeq - NM_001006044
RefSeq Peptide - NP_001006044
swissprot - F1R5J2
swissprot - Q5XJD5
ZFIN ID - ZDB-GENE-041010-140
Ensembl - ENSDARG00000014059
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CLDN5ENSGALG00000001621Gallus gallus
 CLDN5ENSG00000184113Homo sapiens
 Cldn5ENSMUSG00000041378Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cldn5a / claudin 5a / CLDN5* / O00501* / O54942* / claudin 5*ENSDARG0000004371671
cldnc / claudin c / CLDN4* / O14493* / O35054* / claudin 4*ENSDARG0000001595554
cldnh / claudin h / CLDN4* / O14493* / O35054* / claudin 4*ENSDARG0000006950353
cldnb / claudin b / CLDN4* / O14493* / O35054* / claudin 4*ENSDARG0000000954452
cldne / claudin e / CLDN4* / O14493* / O35054* / claudin 4*ENSDARG0000004312851
cldnd / Q9YH91 / claudin d / CLDN4* / O14493* / O35054* / claudin 4*ENSDARG0000000658050
cldna / claudin a / CLDN4* / O14493* / O35054* / claudin 4*ENSDARG0000006988850
cldng / Q9YH90 / claudin g / CLDN4* / O14493* / O35054* / claudin 4*ENSDARG0000000370146
zgc:112437 / CLDN4 (1 of many) / CLDN4* / O14493* / O35054* / claudin 4*ENSDARG0000000921546
cldnf / claudin f / CLDN4* / O14493* / O35054* / claudin 4*ENSDARG0000004313345
cldnj / claudin jENSDARG0000005888042
cldnk / claudin kENSDARG0000004235741
cldn2 / claudin 2 / O88552* / P57739*ENSDARG0000004438740
zgc:136892 / CLDN4 (1 of many) / CLDN4* / O14493* / O35054* / claudin 4*ENSDARG0000006950537
cldn17 / claudin 17 / CLDN8* / P56748* / claudin 8*ENSDARG0000009995036
zgc:110333 / CLDN8 (1 of many) / CLDN8* / P56748* / claudin 8*ENSDARG0000004062836
Q9YH92 / cldn7b / claudin 7b / CLDN7* / Q9Z261* / O95471* / claudin 7*ENSDARG0000001404735
cldn19 / claudin 19 / Q8N6F1* / Q9ET38*ENSDARG0000004456935
Q6DHP1 / cldn7a / claudin 7a / CLDN7* / Q9Z261* / O95471* / claudin 7*ENSDARG0000003637634
cldn1 / claudin 1 / O95832*ENSDARG0000004004533


Protein motifs (from Interpro)
Interpro ID Name
 IPR004031  PMP-22/EMP/MP20/Claudin superfamily
 IPR006187  Claudin
 IPR017974  Claudin, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005923 bicellular tight junction IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030054 cell junction IEA
 molecular_functionGO:0005198 structural molecule activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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