ENSDARG00000058880


Danio rerio

Features
Gene ID: ENSDARG00000058880
  
Biological name :cldnj
  
Synonyms : claudin j / cldnj
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 15
Strand: -1
Band:
Gene start: 2631421
Gene end: 2632891
  
Corresponding Affymetrix probe sets: Dr.8680.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000076279
NCBI entrez gene - 81589     See in Manteia.
swissprot - F1QVR6
ZFIN ID - ZDB-GENE-010328-10
Ensembl - ENSDARG00000058880
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000035131Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
zgc:112437 / CLDN4 (1 of many) / CLDN4* / O14493* / O35054* / claudin 4*ENSDARG0000000921550
cldne / claudin e / CLDN4* / O14493* / O35054* / claudin 4*ENSDARG0000004312850
cldnh / claudin h / CLDN4* / O14493* / O35054* / claudin 4*ENSDARG0000006950349
cldna / claudin a / CLDN4* / O14493* / O35054* / claudin 4*ENSDARG0000006988847
cldng / Q9YH90 / claudin g / CLDN4* / O14493* / O35054* / claudin 4*ENSDARG0000000370147
cldnd / Q9YH91 / claudin d / CLDN4* / O14493* / O35054* / claudin 4*ENSDARG0000000658046
cldnc / claudin c / CLDN4* / O14493* / O35054* / claudin 4*ENSDARG0000001595546
cldn5a / claudin 5a / CLDN5* / O00501* / O54942* / claudin 5*ENSDARG0000004371646
cldnb / claudin b / CLDN4* / O14493* / O35054* / claudin 4*ENSDARG0000000954445
cldn5b / claudin 5b / CLDN5* / O00501* / O54942* / claudin 5*ENSDARG0000001405944
cldnk / claudin kENSDARG0000004235744
cldn17 / claudin 17 / CLDN8* / P56748* / claudin 8*ENSDARG0000009995042
cldnf / claudin f / CLDN4* / O14493* / O35054* / claudin 4*ENSDARG0000004313340
zgc:110333 / CLDN8 (1 of many) / CLDN8* / P56748* / claudin 8*ENSDARG0000004062840
Q9YH92 / cldn7b / claudin 7b / CLDN7* / Q9Z261* / O95471* / claudin 7*ENSDARG0000001404738
zgc:136892 / CLDN4 (1 of many) / CLDN4* / O14493* / O35054* / claudin 4*ENSDARG0000006950536
cldn2 / claudin 2 / O88552* / P57739*ENSDARG0000004438735
cldn19 / claudin 19 / Q8N6F1* / Q9ET38*ENSDARG0000004456935
Q6DHP1 / cldn7a / claudin 7a / CLDN7* / Q9Z261* / O95471* / claudin 7*ENSDARG0000003637635
cldn1 / claudin 1 / O95832*ENSDARG0000004004532


Protein motifs (from Interpro)
Interpro ID Name
 IPR004031  PMP-22/EMP/MP20/Claudin superfamily
 IPR006187  Claudin
 IPR017974  Claudin, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0031174 lifelong otolith mineralization IMP
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005923 bicellular tight junction IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030054 cell junction IEA
 molecular_functionGO:0005198 structural molecule activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000217 inner ear inner ear lacks all parts of type otolith , abnormal
Show

 ZFA:0001617 otolith otolith quality , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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