ENSDARG00000040045


Danio rerio

Features
Gene ID: ENSDARG00000040045
  
Biological name :cldn1
  
Synonyms : claudin 1 / cldn1
  
Possible biological names infered from orthology : O88551 / O95832
  
Species: Danio rerio
  
Chr. number: 2
Strand: 1
Band:
Gene start: 68789
Gene end: 71801
  
Corresponding Affymetrix probe sets: Dr.6799.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000058568
swissprot - F1R6Z2
ZFIN ID - ZDB-GENE-010328-11
Ensembl - ENSDARG00000040045
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CLDN1ENSGALG00000026862Gallus gallus
 CLDN1ENSG00000163347Homo sapiens
 Cldn1ENSMUSG00000022512Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cldn19 / claudin 19 / Q8N6F1* / Q9ET38*ENSDARG0000004456944
Q9YH92 / cldn7b / claudin 7b / CLDN7* / Q9Z261* / O95471* / claudin 7*ENSDARG0000001404743
cldnb / claudin b / CLDN4* / O14493* / O35054* / claudin 4*ENSDARG0000000954441
zgc:112437 / CLDN4 (1 of many) / CLDN4* / O14493* / O35054* / claudin 4*ENSDARG0000000921540
Q6DHP1 / cldn7a / claudin 7a / CLDN7* / Q9Z261* / O95471* / claudin 7*ENSDARG0000003637639
cldna / claudin a / CLDN4* / O14493* / O35054* / claudin 4*ENSDARG0000006988839
cldnd / Q9YH91 / claudin d / CLDN4* / O14493* / O35054* / claudin 4*ENSDARG0000000658039
cldnk / claudin kENSDARG0000004235739
cldnc / claudin c / CLDN4* / O14493* / O35054* / claudin 4*ENSDARG0000001595539
cldng / Q9YH90 / claudin g / CLDN4* / O14493* / O35054* / claudin 4*ENSDARG0000000370138
cldn2 / claudin 2 / O88552* / P57739*ENSDARG0000004438738
cldne / claudin e / CLDN4* / O14493* / O35054* / claudin 4*ENSDARG0000004312838
cldnh / claudin h / CLDN4* / O14493* / O35054* / claudin 4*ENSDARG0000006950336
cldn5b / claudin 5b / CLDN5* / O00501* / O54942* / claudin 5*ENSDARG0000001405935
cldn5a / claudin 5a / CLDN5* / O00501* / O54942* / claudin 5*ENSDARG0000004371635
zgc:110333 / CLDN8 (1 of many) / CLDN8* / P56748* / claudin 8*ENSDARG0000004062834
cldnj / claudin jENSDARG0000005888032
cldnf / claudin f / CLDN4* / O14493* / O35054* / claudin 4*ENSDARG0000004313332
cldn17 / claudin 17 / CLDN8* / P56748* / claudin 8*ENSDARG0000009995031
zgc:136892 / CLDN4 (1 of many) / CLDN4* / O14493* / O35054* / claudin 4*ENSDARG0000006950530


Protein motifs (from Interpro)
Interpro ID Name
 IPR003548  Claudin-1
 IPR004031  PMP-22/EMP/MP20/Claudin superfamily
 IPR006187  Claudin
 IPR017974  Claudin, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005923 bicellular tight junction IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030054 cell junction IEA
 molecular_functionGO:0005198 structural molecule activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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