ENSDARG00000006580


Danio rerio

Features
Gene ID: ENSDARG00000006580
  
Biological name :cldnd
  
Synonyms : claudin d / cldnd / Q9YH91
  
Possible biological names infered from orthology : claudin 4 / CLDN4 / O14493 / O35054
  
Species: Danio rerio
  
Chr. number: 21
Strand: 1
Band:
Gene start: 25777425
Gene end: 25778201
  
Corresponding Affymetrix probe sets: Dr.5719.1.A1_at (Zebrafish Array)   NM_180964_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000025766
NCBI entrez gene - 81583     See in Manteia.
RefSeq - NM_180964
RefSeq Peptide - NP_851295
swissprot - Q9YH91
ZFIN ID - ZDB-GENE-010328-4
Ensembl - ENSDARG00000006580
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CLDN4ENSG00000189143Homo sapiens
 Cldn4ENSMUSG00000047501Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cldne / claudin e / CLDN4* / O14493* / O35054* / claudin 4*ENSDARG0000004312866
cldnb / claudin b / CLDN4* / O14493* / O35054* / claudin 4*ENSDARG0000000954464
cldna / claudin a / CLDN4* / O14493* / O35054* / claudin 4*ENSDARG0000006988864
zgc:112437 / CLDN4 (1 of many) / CLDN4* / O14493* / O35054* / claudin 4*ENSDARG0000000921562
cldnh / claudin h / CLDN4* / O14493* / O35054* / claudin 4*ENSDARG0000006950361
cldnc / claudin c / CLDN4* / O14493* / O35054* / claudin 4*ENSDARG0000001595560
cldng / Q9YH90 / claudin g / CLDN4* / O14493* / O35054* / claudin 4*ENSDARG0000000370159
cldn5a / claudin 5a / CLDN5* / O00501* / O54942* / claudin 5*ENSDARG0000004371658
cldnk / claudin kENSDARG0000004235752
cldn5b / claudin 5b / CLDN5* / O00501* / O54942* / claudin 5*ENSDARG0000001405952
zgc:136892 / CLDN4 (1 of many) / CLDN4* / O14493* / O35054* / claudin 4*ENSDARG0000006950552
cldnf / claudin f / CLDN4* / O14493* / O35054* / claudin 4*ENSDARG0000004313350
cldnj / claudin jENSDARG0000005888047
zgc:110333 / CLDN8 (1 of many) / CLDN8* / P56748* / claudin 8*ENSDARG0000004062843
Q6DHP1 / cldn7a / claudin 7a / CLDN7* / Q9Z261* / O95471* / claudin 7*ENSDARG0000003637643
cldn19 / claudin 19 / Q8N6F1* / Q9ET38*ENSDARG0000004456942
Q9YH92 / cldn7b / claudin 7b / CLDN7* / Q9Z261* / O95471* / claudin 7*ENSDARG0000001404741
cldn17 / claudin 17 / CLDN8* / P56748* / claudin 8*ENSDARG0000009995040
cldn2 / claudin 2 / O88552* / P57739*ENSDARG0000004438740
cldn1 / claudin 1 / O95832*ENSDARG0000004004539


Protein motifs (from Interpro)
Interpro ID Name
 IPR004031  PMP-22/EMP/MP20/Claudin superfamily
 IPR017974  Claudin, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016338 calcium-independent cell-cell adhesion via plasma membrane cell-adhesion molecules ISS
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005923 bicellular tight junction ISS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030054 cell junction IEA
 molecular_functionGO:0005198 structural molecule activity IEA
 molecular_functionGO:0042802 identical protein binding ISS


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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