ENSDARG00000044387


Danio rerio

Features
Gene ID: ENSDARG00000044387
  
Biological name :cldn2
  
Synonyms : claudin 2 / cldn2
  
Possible biological names infered from orthology : O88552 / P57739
  
Species: Danio rerio
  
Chr. number: 21
Strand: 1
Band:
Gene start: 38002879
Gene end: 38009507
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000065182
NCBI entrez gene - 562525     See in Manteia.
RefSeq - NM_001004559
RefSeq - XM_005170272
RefSeq Peptide - NP_001004559
swissprot - F1QKA9
ZFIN ID - ZDB-GENE-040912-26
Ensembl - ENSDARG00000044387
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CLDN2ENSGALG00000007311Gallus gallus
 CLDN2ENSG00000165376Homo sapiens
 Cldn2ENSMUSG00000047230Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cldnh / claudin h / CLDN4* / O14493* / O35054* / claudin 4*ENSDARG0000006950333
cldn5b / claudin 5b / CLDN5* / O00501* / O54942* / claudin 5*ENSDARG0000001405932
cldnc / claudin c / CLDN4* / O14493* / O35054* / claudin 4*ENSDARG0000001595532
cldn5a / claudin 5a / CLDN5* / O00501* / O54942* / claudin 5*ENSDARG0000004371632
cldnd / Q9YH91 / claudin d / CLDN4* / O14493* / O35054* / claudin 4*ENSDARG0000000658031
cldn19 / claudin 19 / Q8N6F1* / Q9ET38*ENSDARG0000004456931
cldna / claudin a / CLDN4* / O14493* / O35054* / claudin 4*ENSDARG0000006988830
cldnb / claudin b / CLDN4* / O14493* / O35054* / claudin 4*ENSDARG0000000954430
zgc:112437 / CLDN4 (1 of many) / CLDN4* / O14493* / O35054* / claudin 4*ENSDARG0000000921530
Q6DHP1 / cldn7a / claudin 7a / CLDN7* / Q9Z261* / O95471* / claudin 7*ENSDARG0000003637630
zgc:136892 / CLDN4 (1 of many) / CLDN4* / O14493* / O35054* / claudin 4*ENSDARG0000006950530
cldne / claudin e / CLDN4* / O14493* / O35054* / claudin 4*ENSDARG0000004312829
cldng / Q9YH90 / claudin g / CLDN4* / O14493* / O35054* / claudin 4*ENSDARG0000000370129
cldn1 / claudin 1 / O95832*ENSDARG0000004004529
cldnk / claudin kENSDARG0000004235729
Q9YH92 / cldn7b / claudin 7b / CLDN7* / Q9Z261* / O95471* / claudin 7*ENSDARG0000001404728
cldnj / claudin jENSDARG0000005888027
zgc:110333 / CLDN8 (1 of many) / CLDN8* / P56748* / claudin 8*ENSDARG0000004062826
cldnf / claudin f / CLDN4* / O14493* / O35054* / claudin 4*ENSDARG0000004313326
cldn17 / claudin 17 / CLDN8* / P56748* / claudin 8*ENSDARG0000009995023


Protein motifs (from Interpro)
Interpro ID Name
 IPR003556  Claudin-14
 IPR004031  PMP-22/EMP/MP20/Claudin superfamily
 IPR006187  Claudin
 IPR017974  Claudin, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005923 bicellular tight junction IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030054 cell junction IEA
 molecular_functionGO:0005198 structural molecule activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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