ENSDARG00000040628


Danio rerio

Features
Gene ID: ENSDARG00000040628
  
Biological name :CLDN8 (1 of many)
  
Synonyms : CLDN8 (1 of many) / zgc:110333
  
Possible biological names infered from orthology : claudin 8 / CLDN8 / P56748 / Q9Z260
  
Species: Danio rerio
  
Chr. number: 15
Strand: 1
Band:
Gene start: 42560354
Gene end: 42575208
  
Corresponding Affymetrix probe sets: Dr.10400.1.A1_at (Zebrafish Array)   NM_001017799_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000059483
Ensembl peptide - ENSDARP00000145405
NCBI entrez gene - 550497     See in Manteia.
RefSeq - NM_001017799
RefSeq Peptide - NP_001017799
swissprot - Q568F1
ZFIN ID - ZDB-GENE-050417-331
Ensembl - ENSDARG00000040628
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000015841Gallus gallus
 ENSGALG00000044073Gallus gallus
 CLDN8ENSG00000156284Homo sapiens
 Cldn8ENSMUSG00000050520Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cldn17 / claudin 17 / CLDN8* / P56748* / claudin 8*ENSDARG0000009995045
zgc:112437 / CLDN4 (1 of many) / CLDN4* / O14493* / O35054* / claudin 4*ENSDARG0000000921531
cldnd / Q9YH91 / claudin d / CLDN4* / O14493* / O35054* / claudin 4*ENSDARG0000000658030
cldne / claudin e / CLDN4* / O14493* / O35054* / claudin 4*ENSDARG0000004312830
cldnb / claudin b / CLDN4* / O14493* / O35054* / claudin 4*ENSDARG0000000954428
cldn5a / claudin 5a / CLDN5* / O00501* / O54942* / claudin 5*ENSDARG0000004371628
cldnj / claudin jENSDARG0000005888028
cldna / claudin a / CLDN4* / O14493* / O35054* / claudin 4*ENSDARG0000006988828
cldn5b / claudin 5b / CLDN5* / O00501* / O54942* / claudin 5*ENSDARG0000001405927
cldnk / claudin kENSDARG0000004235727
cldnc / claudin c / CLDN4* / O14493* / O35054* / claudin 4*ENSDARG0000001595527
cldnh / claudin h / CLDN4* / O14493* / O35054* / claudin 4*ENSDARG0000006950326
cldng / Q9YH90 / claudin g / CLDN4* / O14493* / O35054* / claudin 4*ENSDARG0000000370126
zgc:136892 / CLDN4 (1 of many) / CLDN4* / O14493* / O35054* / claudin 4*ENSDARG0000006950525
cldn1 / claudin 1 / O95832*ENSDARG0000004004524
cldnf / claudin f / CLDN4* / O14493* / O35054* / claudin 4*ENSDARG0000004313324
cldn2 / claudin 2 / O88552* / P57739*ENSDARG0000004438723
cldn19 / claudin 19 / Q8N6F1* / Q9ET38*ENSDARG0000004456923
Q6DHP1 / cldn7a / claudin 7a / CLDN7* / Q9Z261* / O95471* / claudin 7*ENSDARG0000003637622
Q9YH92 / cldn7b / claudin 7b / CLDN7* / Q9Z261* / O95471* / claudin 7*ENSDARG0000001404722


Protein motifs (from Interpro)
Interpro ID Name
 IPR004031  PMP-22/EMP/MP20/Claudin superfamily
 IPR006187  Claudin
 IPR017974  Claudin, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005923 bicellular tight junction IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030054 cell junction IEA
 molecular_functionGO:0005198 structural molecule activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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