ENSDARG00000069888


Danio rerio

Features
Gene ID: ENSDARG00000069888
  
Biological name :cldna
  
Synonyms : claudin a / cldna
  
Possible biological names infered from orthology : claudin 4 / CLDN4 / O14493 / O35054
  
Species: Danio rerio
  
Chr. number: 15
Strand: -1
Band:
Gene start: 2655566
Gene end: 2657508
  
Corresponding Affymetrix probe sets: Dr.5038.1.S1_at (Zebrafish Array)   NM_131762_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000092862
NCBI entrez gene - 81580     See in Manteia.
RefSeq - NM_131762
RefSeq Peptide - NP_571837
swissprot - Q6P0U4
ZFIN ID - ZDB-GENE-010328-1
Ensembl - ENSDARG00000069888
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CLDN4ENSG00000189143Homo sapiens
 Cldn4ENSMUSG00000047501Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cldnb / claudin b / CLDN4* / O14493* / O35054* / claudin 4*ENSDARG0000000954472
cldnd / Q9YH91 / claudin d / CLDN4* / O14493* / O35054* / claudin 4*ENSDARG0000000658065
cldnc / claudin c / CLDN4* / O14493* / O35054* / claudin 4*ENSDARG0000001595563
cldne / claudin e / CLDN4* / O14493* / O35054* / claudin 4*ENSDARG0000004312862
cldnh / claudin h / CLDN4* / O14493* / O35054* / claudin 4*ENSDARG0000006950362
zgc:112437 / CLDN4 (1 of many) / CLDN4* / O14493* / O35054* / claudin 4*ENSDARG0000000921559
cldng / Q9YH90 / claudin g / CLDN4* / O14493* / O35054* / claudin 4*ENSDARG0000000370156
cldn5a / claudin 5a / CLDN5* / O00501* / O54942* / claudin 5*ENSDARG0000004371654
cldn5b / claudin 5b / CLDN5* / O00501* / O54942* / claudin 5*ENSDARG0000001405953
cldnk / claudin kENSDARG0000004235753
cldnf / claudin f / CLDN4* / O14493* / O35054* / claudin 4*ENSDARG0000004313350
cldnj / claudin jENSDARG0000005888048
zgc:136892 / CLDN4 (1 of many) / CLDN4* / O14493* / O35054* / claudin 4*ENSDARG0000006950547
Q6DHP1 / cldn7a / claudin 7a / CLDN7* / Q9Z261* / O95471* / claudin 7*ENSDARG0000003637645
cldn17 / claudin 17 / CLDN8* / P56748* / claudin 8*ENSDARG0000009995043
Q9YH92 / cldn7b / claudin 7b / CLDN7* / Q9Z261* / O95471* / claudin 7*ENSDARG0000001404742
zgc:110333 / CLDN8 (1 of many) / CLDN8* / P56748* / claudin 8*ENSDARG0000004062841
cldn2 / claudin 2 / O88552* / P57739*ENSDARG0000004438739
cldn1 / claudin 1 / O95832*ENSDARG0000004004539
cldn19 / claudin 19 / Q8N6F1* / Q9ET38*ENSDARG0000004456938


Protein motifs (from Interpro)
Interpro ID Name
 IPR004031  PMP-22/EMP/MP20/Claudin superfamily
 IPR006187  Claudin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005923 bicellular tight junction IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030054 cell junction IEA
 molecular_functionGO:0005198 structural molecule activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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