ENSDARG00000070074


Danio rerio

Features
Gene ID: ENSDARG00000070074
  
Biological name :lrp8
  
Synonyms : low density lipoprotein receptor-related protein 8, apolipoprotein e receptor / lrp8
  
Possible biological names infered from orthology : LDL receptor related protein 8 / Low-density lipoprotein receptor-related protein 8 / Q14114 / Q924X6
  
Species: Danio rerio
  
Chr. number: 6
Strand: 1
Band:
Gene start: 34511886
Gene end: 34811508
  
Corresponding Affymetrix probe sets: Dr.12864.1.A1_at (Zebrafish Array)   Dr.16435.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000093330
Ensembl peptide - ENSDARP00000143584
NCBI entrez gene - 557734     See in Manteia.
swissprot - E7EZD4
swissprot - G9MDF3
ZFIN ID - ZDB-GENE-050506-134
Ensembl - ENSDARG00000070074
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LRP8ENSGALG00000010692Gallus gallus
 LRP8ENSG00000157193Homo sapiens
 Lrp8ENSMUSG00000028613Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
vldlr / very low density lipoprotein receptor / P98155* / P98156*ENSDARG0000000625747
ldlra / low density lipoprotein receptor a / LDLR* / P35951* / P01130* / low density lipoprotein receptor*ENSDARG0000002947641
ldlrb / low density lipoprotein receptor b / LDLR* / P35951* / P01130* / low density lipoprotein receptor*ENSDARG0000002675938
lrp1aa / low density lipoprotein receptor-related protein 1Aa / LRP1* / Q07954* / LDL receptor related protein 1*ENSDARG0000009782733
lrp2a / low density lipoprotein receptor-related protein 2a / LRP2* / P98164* / A2ARV4* / LDL receptor related protein 2* / low density lipoprotein receptor-related protein 2*ENSDARG0000010250633
lrp1ab / low density lipoprotein receptor-related protein 1Ab / LRP1* / Q07954* / LDL receptor related protein 1*ENSDARG0000002914633
lrp1bb / low density lipoprotein receptor-related protein 1Bb / LRP1B* / Q9NZR2* / LDL receptor related protein 1B*ENSDARG0000006151732
lrp2b / low density lipoprotein receptor-related protein 2bENSDARG0000000790632
lrp1ba / low density lipoprotein receptor-related protein 1Ba / LRP1B* / Q9NZR2* / LDL receptor related protein 1B*ENSDARG0000000478931
lrp13 / low-density lipoprotein receptor related-protein 13 / Gm19410*ENSDARG0000002347925
si:dkey-88l16.3 / Gm19410*ENSDARG0000009405524
lrp5 / low density lipoprotein receptor-related protein 5 / O75197* / LDL receptor related protein 5*ENSDARG0000000692115
CABZ01071171.1 / Danio rerio low density lipoprotein receptor-related protein 4 (lrp4), mRNA. / LRP4* / Q8VI56* / O75096* / LDL receptor related protein 4* / Low-density lipoprotein recepto...ENSDARG000001163532
lrp6 / low density lipoprotein receptor-related protein 6 / O75581* / LDL receptor related protein 6*ENSDARG000001001432
lrp1ba / low density lipoprotein receptor-related protein 1Ba / Gm19410*ENSDARG000000941711


Protein motifs (from Interpro)
Interpro ID Name
 IPR000033  LDLR class B repeat
 IPR000152  EGF-type aspartate/asparagine hydroxylation site
 IPR000742  EGF-like domain
 IPR001881  EGF-like calcium-binding domain
 IPR002172  Low-density lipoprotein (LDL) receptor class A repeat
 IPR009030  Growth factor receptor cysteine-rich domain superfamily
 IPR011042  Six-bladed beta-propeller, TolB-like
 IPR013032  EGF-like, conserved site
 IPR018097  EGF-like calcium-binding, conserved site
 IPR023415  Low-density lipoprotein (LDL) receptor class A, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
Platelet sensitization by LDL


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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