ENSG00000125492


Homo sapiens

Features
Gene ID: ENSG00000125492
  
Biological name :BARHL1
  
Synonyms : BARHL1 / BarH like homeobox 1 / Q9BZE3
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 9
Strand: 1
Band: q34.13
Gene start: 132582185
Gene end: 132590266
  
Corresponding Affymetrix probe sets: 224092_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000444704
Ensembl peptide - ENSP00000263610
NCBI entrez gene - 56751     See in Manteia.
OMIM - 605211
RefSeq - NM_020064
RefSeq Peptide - NP_064448
swissprot - Q9BZE3
Ensembl - ENSG00000125492
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 barhl1aENSDARG00000035508Danio rerio
 barhl1bENSDARG00000019013Danio rerio
 BARHL1ENSGALG00000043217Gallus gallus
 Barhl1ENSMUSG00000026805Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
BARHL2 / Q9NY43 / BarH like homeobox 2ENSG0000014303261
BARX2 / Q9UMQ3 / BARX homeobox 2ENSG0000004303924
TLX3 / O43711 / T cell leukemia homeobox 3ENSG0000016443822
TLX1 / P31314 / T cell leukemia homeobox 1ENSG0000010780720
TLX2 / O43763 / T cell leukemia homeobox 2ENSG0000011529720
LBX1 / P52954 / ladybird homeobox 1ENSG0000013813620
NKX6-1 / P78426 / NK6 homeobox 1ENSG0000016362319
BSX / Q3C1V8 / brain specific homeoboxENSG0000018890918
BARX1 / Q9HBU1 / BARX homeobox 1ENSG0000013166818
HLX / Q14774 / H2.0 like homeoboxENSG0000013663018
HHEX / Q03014 / hematopoietically expressed homeoboxENSG0000015280417
DBX1 / A6NMT0 / developing brain homeobox 1ENSG0000010985117
NKX6-2 / Q9C056 / NK6 homeobox 2ENSG0000014882617
DBX2 / Q6ZNG2 / developing brain homeobox 2ENSG0000018561016
LBX2 / Q6XYB7 / ladybird homeobox 2ENSG0000017952816
A6NJ46 / NKX6-3 / NK6 homeobox 3ENSG000001650668


Protein motifs (from Interpro)
Interpro ID Name
 IPR001356  Homeobox domain
 IPR009057  Homeobox-like domain superfamily
 IPR017970  Homeobox, conserved site
 IPR020479  Homeobox domain, metazoa


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001764 neuron migration IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IBA
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 biological_processGO:0007605 sensory perception of sound IEA
 biological_processGO:0030901 midbrain development IEA
 biological_processGO:0043524 negative regulation of neuron apoptotic process IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 cellular_componentGO:0005634 nucleus IBA
 molecular_functionGO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding IBA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding NAS
 molecular_functionGO:0001077 transcriptional activator activity, RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0001228 transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific DNA binding IBA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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