ENSG00000151090


Homo sapiens

Features
Gene ID: ENSG00000151090
  
Biological name :THRB
  
Synonyms : P10828 / THRB / thyroid hormone receptor beta
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 3
Strand: -1
Band: p24.2
Gene start: 24117153
Gene end: 24495756
  
Corresponding Affymetrix probe sets: 207044_at (Human Genome U133 Plus 2.0 Array)   228716_at (Human Genome U133 Plus 2.0 Array)   229657_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000493709
Ensembl peptide - ENSP00000414910
Ensembl peptide - ENSP00000494618
Ensembl peptide - ENSP00000496686
Ensembl peptide - ENSP00000496616
Ensembl peptide - ENSP00000496509
Ensembl peptide - ENSP00000496095
Ensembl peptide - ENSP00000496029
Ensembl peptide - ENSP00000280696
Ensembl peptide - ENSP00000348827
Ensembl peptide - ENSP00000379904
Ensembl peptide - ENSP00000388467
Ensembl peptide - ENSP00000393932
Ensembl peptide - ENSP00000395362
Ensembl peptide - ENSP00000399573
Ensembl peptide - ENSP00000404233
Ensembl peptide - ENSP00000404898
Ensembl peptide - ENSP00000414100
Ensembl peptide - ENSP00000414444
NCBI entrez gene - 7068     See in Manteia.
OMIM - 190160
RefSeq - XM_017007115
RefSeq - NM_001354715
RefSeq - XM_005265421
RefSeq - XM_005265423
RefSeq - XM_005265424
RefSeq - XM_006713317
RefSeq - XM_006713318
RefSeq - XM_011534046
RefSeq - XM_011534047
RefSeq - XM_011534048
RefSeq - XM_011534049
RefSeq - XM_011534050
RefSeq - XM_011534051
RefSeq - XM_011534052
RefSeq - XM_011534053
RefSeq - XM_017007108
RefSeq - XM_017007109
RefSeq - XM_017007110
RefSeq - XM_017007111
RefSeq - XM_017007112
RefSeq - XM_017007113
RefSeq - XM_017007114
RefSeq - NM_000461
RefSeq - NM_001128176
RefSeq - NM_001128177
RefSeq - NM_001252634
RefSeq - NM_001354708
RefSeq - NM_001354709
RefSeq - NM_001354710
RefSeq - NM_001354711
RefSeq - NM_001354712
RefSeq - NM_001354713
RefSeq - NM_001354714
RefSeq Peptide - NP_001121648
RefSeq Peptide - NP_001341637
RefSeq Peptide - NP_001341638
RefSeq Peptide - NP_001341639
RefSeq Peptide - NP_001341640
RefSeq Peptide - NP_001341641
RefSeq Peptide - NP_001341642
RefSeq Peptide - NP_001341643
RefSeq Peptide - NP_001341644
RefSeq Peptide - NP_000452
RefSeq Peptide - NP_001121649
RefSeq Peptide - NP_001239563
swissprot - C9JTN1
swissprot - C9JNQ4
swissprot - C9JJM3
swissprot - C9JHC2
swissprot - F1D8N7
swissprot - J3KR21
swissprot - C9JZS5
swissprot - P10828
swissprot - A0A0C4DG57
Ensembl - ENSG00000151090
  
Related genetic diseases (OMIM): 145650 - Thyroid hormone resistance, selective pituitary, 145650
  188570 - Thyroid hormone resistance, 188570
  274300 - Thyroid hormone resistance, autosomal recessive, 274300

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 thrbENSDARG00000021163Danio rerio
 THRBENSGALG00000011294Gallus gallus
 ThrbENSMUSG00000021779Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
THRA / P10827 / thyroid hormone receptor, alphaENSG0000012635163
RARA / P10276 / retinoic acid receptor alphaENSG0000013175929
RARB / P10826 / retinoic acid receptor betaENSG0000007709228
RARG / P13631 / retinoic acid receptor gammaENSG0000017281928
NR1I2 / O75469 / nuclear receptor subfamily 1 group I member 2ENSG0000014485225
VDR / P11473 / vitamin D receptorENSG0000011142425
NR1H2 / P55055 / nuclear receptor subfamily 1 group H member 2ENSG0000013140825
NR1H4 / Q96RI1 / nuclear receptor subfamily 1 group H member 4ENSG0000001250425
NR1H3 / Q13133 / nuclear receptor subfamily 1 group H member 3ENSG0000002543424
NR1I3 / Q14994 / nuclear receptor subfamily 1 group I member 3ENSG0000014325723


Protein motifs (from Interpro)
Interpro ID Name
 IPR000536  Nuclear hormone receptor, ligand-binding domain
 IPR001628  Zinc finger, nuclear hormone receptor-type
 IPR001723  Nuclear hormone receptor
 IPR001728  Thyroid hormone receptor
 IPR013088  Zinc finger, NHR/GATA-type
 IPR035500  Nuclear hormone receptor-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IEA
 biological_processGO:0006351 transcription, DNA-templated TAS
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0006367 transcription initiation from RNA polymerase II promoter TAS
 biological_processGO:0007165 signal transduction IEA
 biological_processGO:0007605 sensory perception of sound IEA
 biological_processGO:0007621 negative regulation of female receptivity IEA
 biological_processGO:0008016 regulation of heart contraction IEA
 biological_processGO:0008050 female courtship behavior IEA
 biological_processGO:0009887 animal organ morphogenesis IEA
 biological_processGO:0030522 intracellular receptor signaling pathway IEA
 biological_processGO:0043401 steroid hormone mediated signaling pathway IEA
 biological_processGO:0045892 negative regulation of transcription, DNA-templated IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:0060509 type I pneumocyte differentiation IEA
 cellular_componentGO:0000790 nuclear chromatin IEA
 cellular_componentGO:0005634 nucleus TAS
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0016604 nuclear body IDA
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding NAS
 molecular_functionGO:0003677 DNA binding TAS
 molecular_functionGO:0003700 DNA-binding transcription factor activity NAS
 molecular_functionGO:0003707 steroid hormone receptor activity IEA
 molecular_functionGO:0003714 transcription corepressor activity TAS
 molecular_functionGO:0004887 thyroid hormone receptor activity IDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0019899 enzyme binding IPI
 molecular_functionGO:0031490 chromatin DNA binding IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0070324 thyroid hormone binding IDA


Pathways (from Reactome)
Pathway description
Nuclear Receptor transcription pathway
SUMOylation of intracellular receptors


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000158 Macroglossia "Increased length and width of the tongue." [pmid:19125428]
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 HP:0000239 Large fontanelles "In newborns, the two frontal bones, two parietal bones, and one occipital bone are joined by fibrous sutures, which form a small posterior fontanelle, and a larger, diamond-shaped anterior fontanelle. These regions allow for the skull to pass the birth canal and for later growth. The fontanelles gradually ossify, whereby the posterior fontanelle usually closes by eight weeks and the anterior fontanelle by the 9th to 16th month of age. Large fontanelles are diagnosed if the fontanelles are larger than age-dependent norms." [HPO:curators]
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 HP:0000280 Coarse facial features 
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 HP:0000365 Hearing loss 
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 HP:0000407 Hearing loss, sensorineural "Hearing loss caused by damage or dysfunction of the auditory nerve (cranial nerve VIII)." [HPO:curators]
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 HP:0000444 Beaked nose 
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 HP:0000520 Proptosis 
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 HP:0000750 Impaired language development 
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 HP:0000768 Pectus carinatum "A deformity of the chest caused by overgrowth of the ribs and characterized by protrusion of the sternum." [HPO:curators]
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 HP:0000820 Abnormality of the thyroid gland 
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 HP:0000821 Hypothyroidism 
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 HP:0000836 Hyperthyroidism "Hyperthyroidism refers to excessive secretion of thyroid hormone." [HPO:curators]
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 HP:0000853 Goiter "An enlargement of the thyroid gland." [HPO:curators]
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 HP:0000912 Sprengel anomaly "A complex deformity characterized by congenital elevation of the scapula." [HPO:curators]
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 HP:0000952 Jaundice "Yellow pigmentation of the skin or sclera due to bilirubin, which in turn is the result of increased bilirubin concentration in the bloodstream." [HPO:curators]
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 HP:0001252 Muscular hypotonia "Muscular hypotonia is an abnormally low muscle tone (the amount of tension or resistance to movement in a muscle), often involving reduced muscle strength. Hypotonia is characterized by a diminished resistance to passive stretching." [HPO:curators]
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 HP:0001518 Low birth weight 
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 HP:0001537 Umbilical hernia "Protrusion of abdominal contents through a defect in the abdominal wall musculature around the umbilicus. Skin and subcutaneous tissue overlie the defect." [HPO:curators]
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 HP:0002019 Constipation 
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 HP:0002360 Sleep disturbances "An abnormality of sleep including such phenomena as 1) insomnia/hypersomnia, 2) non-restorative sleep, 3) sleep schedule disorder, 4) excessive daytime somnolence, 5) sleep apnea, and 6) restlessness." [HPO:curators]
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 HP:0002750 Delayed skeletal maturation "A decreased rate of skeletal maturation. Delayed skeletal maturation can be diagnosed on the basis of an estimation of the bone age from radiographs of specific bones in the human body." [HPO:curators]
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 HP:0002925 Increased serum thyroid-stimulating hormone (TSH) 
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 HP:0002930 Thyroid hormone receptor defect 
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 HP:0003270 Abdominal distention "Enlargement or distention of the abdomen, which can be a secondary feature associated with a number of conditions such as bowel obstruction." [HPO:curators]
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 HP:0007018 Attention deficit hyperactivity disorder "Attention deficit hyperactivity disorder (ADHD) manifests at age 2-3 years or by first grade at the latest. The main symptoms are distractibility, impulsivity, hyperactivity, and often trouble organizing tasks and projects, difficulty going to sleep, and social problems from being aggressive, loud, or impatient." [HPO:curators]
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 HP:0010655 Stippling of the epiphyses "The presence of abnormal punctate (speckled, dot-like) calcifications in the epiphyses (FMA:24012)." [HPO:curators]
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 HP:0011788 Increased serum free triiodothyronine (fT3) 
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 HP:0011968 Feeding difficulties "Impaired ability to eat related to problems gathering food and getting ready to suck, chew, or swallow it." [ISCA:eriggs]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000116030 SUMO1 / P63165 / small ubiquitin-like modifier 1  / reaction / complex
 ENSG00000103275 UBE2I / P63279 / ubiquitin conjugating enzyme E2 I  / reaction
 ENSG00000184900 SUMO3 / P55854 / small ubiquitin-like modifier 3  / reaction






 

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