ENSG00000168904


Homo sapiens

Features
Gene ID: ENSG00000168904
  
Biological name :LRRC28
  
Synonyms : leucine rich repeat containing 28 / LRRC28 / Q86X40
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 15
Strand: 1
Band: q26.3
Gene start: 99251362
Gene end: 99390729
  
Corresponding Affymetrix probe sets: 1553940_a_at (Human Genome U133 Plus 2.0 Array)   227423_at (Human Genome U133 Plus 2.0 Array)   238897_at (Human Genome U133 Plus 2.0 Array)   239471_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000453504
Ensembl peptide - ENSP00000454182
Ensembl peptide - ENSP00000304923
Ensembl peptide - ENSP00000332035
Ensembl peptide - ENSP00000404520
Ensembl peptide - ENSP00000452709
Ensembl peptide - ENSP00000452785
Ensembl peptide - ENSP00000452863
Ensembl peptide - ENSP00000452927
Ensembl peptide - ENSP00000453313
Ensembl peptide - ENSP00000453469
NCBI entrez gene - 123355     See in Manteia.
RefSeq - NM_001321680
RefSeq - NM_001284400
RefSeq - NM_001321675
RefSeq - NM_001321676
RefSeq - NM_001321677
RefSeq - NM_001321678
RefSeq - NM_001321679
RefSeq - NM_144598
RefSeq - XM_006720389
RefSeq - XM_011521218
RefSeq - XM_011521220
RefSeq - XM_011521221
RefSeq - XM_017021914
RefSeq Peptide - NP_653199
RefSeq Peptide - NP_001271329
RefSeq Peptide - NP_001308604
RefSeq Peptide - NP_001308605
RefSeq Peptide - NP_001308606
RefSeq Peptide - NP_001308607
RefSeq Peptide - NP_001308608
RefSeq Peptide - NP_001308609
swissprot - H0YKF6
swissprot - H0YKM4
swissprot - H0YKS9
swissprot - H0YLR7
swissprot - Q86X40
swissprot - A0A024RC88
swissprot - Q8WUS2
swissprot - H0YM55
swissprot - H0YM85
swissprot - H0YNW4
swissprot - H0YK92
Ensembl - ENSG00000168904
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 lrrc28ENSDARG00000057477Danio rerio
 LRRC28ENSGALG00000007057Gallus gallus
 Lrrc28ENSMUSG00000030556Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
LRCH4 / O75427 / leucine rich repeats and calponin homology domain containing 4ENSG0000007745428
LRCH2 / Q5VUJ6 / leucine rich repeats and calponin homology domain containing 2ENSG0000013022426
LRCH1 / Q9Y2L9 / leucine rich repeats and calponin homology domain containing 1ENSG0000013614126
LRCH3 / Q96II8 / leucine rich repeats and calponin homology domain containing 3ENSG0000018600125
PIDD1 / Q9HB75 / p53-induced death domain protein 1ENSG0000017759523
LRRC69 / Q6ZNQ3 / leucine rich repeat containing 69ENSG0000021495420
LRRC2 / Q9BYS8 / leucine rich repeat containing 2ENSG0000016382718
LRRC8A / Q8IWT6 / leucine rich repeat containing 8 VRAC subunit AENSG0000013680217
LRRC39 / Q96DD0 / leucine rich repeat containing 39ENSG0000012247717
LRRC8E / Q6NSJ5 / leucine rich repeat containing 8 VRAC subunit EENSG0000017101717
LRSAM1 / Q6UWE0 / leucine rich repeat and sterile alpha motif containing 1ENSG0000014835616
LRRC8D / Q7L1W4 / leucine rich repeat containing 8 VRAC subunit DENSG0000017149216
LRRC8C / Q8TDW0 / leucine rich repeat containing 8 VRAC subunit CENSG0000017148816
LRRC8B / Q6P9F7 / leucine rich repeat containing 8 VRAC subunit BENSG0000019714715
LRRC57 / Q8N9N7 / leucine rich repeat containing 57ENSG0000018097915
LRRC18 / Q8N456 / leucine rich repeat containing 18ENSG0000016538313
RSU1 / Q15404 / Ras suppressor protein 1ENSG0000014848412
AC093423.3ENSG000002719490


Protein motifs (from Interpro)
Interpro ID Name
 IPR001611  Leucine-rich repeat
 IPR003591  Leucine-rich repeat, typical subtype
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007165 signal transduction IBA
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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