ENSG00000136802


Homo sapiens

Features
Gene ID: ENSG00000136802
  
Biological name :LRRC8A
  
Synonyms : leucine rich repeat containing 8 VRAC subunit A / LRRC8A / Q8IWT6
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 9
Strand: 1
Band: q34.11
Gene start: 128882112
Gene end: 128918039
  
Corresponding Affymetrix probe sets: 224624_at (Human Genome U133 Plus 2.0 Array)   233487_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000361682
Ensembl peptide - ENSP00000259324
Ensembl peptide - ENSP00000361680
NCBI entrez gene - 56262     See in Manteia.
OMIM - 608360
RefSeq - XM_011518865
RefSeq - NM_001127244
RefSeq - NM_001127245
RefSeq - NM_019594
RefSeq - XM_005252095
RefSeq - XM_005252096
RefSeq - XM_006717186
RefSeq - XM_011518863
RefSeq - XM_011518864
RefSeq Peptide - NP_001120716
RefSeq Peptide - NP_001120717
RefSeq Peptide - NP_062540
swissprot - Q8IWT6
swissprot - A0A024R892
Ensembl - ENSG00000136802
  
Related genetic diseases (OMIM): 613506 - ?Agammaglobulinemia 5, 613506
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 lrrc8aaENSDARG00000032188Danio rerio
 lrrc8abENSDARG00000052155Danio rerio
 LRRC8AENSGALG00000004573Gallus gallus
 Lrrc8aENSMUSG00000007476Mus musculus
 Q80WG5ENSMUSG00000099041Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
LRRC8B / Q6P9F7 / leucine rich repeat containing 8 VRAC subunit BENSG0000019714758
LRRC8C / Q8TDW0 / leucine rich repeat containing 8 VRAC subunit CENSG0000017148857
LRRC8D / Q7L1W4 / leucine rich repeat containing 8 VRAC subunit DENSG0000017149256
LRRC8E / Q6NSJ5 / leucine rich repeat containing 8 VRAC subunit EENSG0000017101753
LRSAM1 / Q6UWE0 / leucine rich repeat and sterile alpha motif containing 1ENSG0000014835613
LRCH3 / Q96II8 / leucine rich repeats and calponin homology domain containing 3ENSG0000018600110
LRCH4 / O75427 / leucine rich repeats and calponin homology domain containing 4ENSG0000007745410
LRCH1 / Q9Y2L9 / leucine rich repeats and calponin homology domain containing 1ENSG0000013614110
LRRC39 / Q96DD0 / leucine rich repeat containing 39ENSG000001224779
LRCH2 / Q5VUJ6 / leucine rich repeats and calponin homology domain containing 2ENSG000001302249
LRRC69 / Q6ZNQ3 / leucine rich repeat containing 69ENSG000002149548
PIDD1 / Q9HB75 / p53-induced death domain protein 1ENSG000001775958
LRRC28 / Q86X40 / leucine rich repeat containing 28ENSG000001689048
LRRC2 / Q9BYS8 / leucine rich repeat containing 2ENSG000001638278
RSU1 / Q15404 / Ras suppressor protein 1ENSG000001484847
LRRC18 / Q8N456 / leucine rich repeat containing 18ENSG000001653836
LRRC57 / Q8N9N7 / leucine rich repeat containing 57ENSG000001809795
AC093423.3ENSG000002719494


Protein motifs (from Interpro)
Interpro ID Name
 IPR001611  Leucine-rich repeat
 IPR003591  Leucine-rich repeat, typical subtype
 IPR021040  LRRC8, pannexin-like TM region
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002329 pre-B cell differentiation ISS
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0006820 anion transport IMP
 biological_processGO:0006884 cell volume homeostasis IMP
 biological_processGO:0006970 response to osmotic stress IMP
 biological_processGO:0007165 signal transduction IBA
 biological_processGO:0015698 inorganic anion transport IEA
 biological_processGO:0030154 cell differentiation IEA
 biological_processGO:0055085 transmembrane transport TAS
 cellular_componentGO:0005737 cytoplasm IBA
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0009986 cell surface IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0034702 ion channel complex IDA
 molecular_functionGO:0005225 volume-sensitive anion channel activity TAS
 molecular_functionGO:0005253 anion channel activity IMP
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0042802 identical protein binding IPI


Pathways (from Reactome)
Pathway description
Miscellaneous transport and binding events


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000218 High palate "Height of the palate more than 2 SD above the mean (objective) or palatal height at the level of the first permanent molar more than twice the height of the teeth (subjective)." [pmid:19125428]
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 HP:0000246 Sinusitis 
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 HP:0000286 Epicanthus "An epicanthal fold is a semilunar fold of skin that extends from the upper eyelid across the medial canthal area to the lower eyelid." [HPO:curators]
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 HP:0000316 Hypertelorism 
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 HP:0000369 Low-set ears "Low-set ears are defined to be set below an arbitrary line drawn between the lateral canthus of the eye and the occipital protruberance." [HPO:curators]
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 HP:0000389 Chronic otitis media 
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 HP:0000509 Conjunctivitis "Inflammation of the conjunctiva." [HPO:curators]
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 HP:0000988 Skin rash 
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 HP:0001287 Meningitis 
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 HP:0001369 Arthritis 
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 HP:0001508 Failure to thrive 
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 HP:0001581 Recurrent skin infections "Infections of the skin that happen multiple times." [HPO:curators]
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 HP:0001875 Neutropenia 
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 HP:0001944 Dehydration 
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 HP:0001945 Fever 
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 HP:0002014 Diarrhea 
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 HP:0002024 Malabsorption 
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 HP:0002110 Bronchiectasis 
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 HP:0002205 Recurrent respiratory infections 
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 HP:0002721 Immunodeficiency 
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 HP:0002754 Osteomyelitis 
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 HP:0004432 Agammaglobulinemia 
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 HP:0008572 External ear malformation 
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 HP:0012115 Hepatitis "Inflammation of the liver." [HPO:probinson]
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 HP:0012378 Fatigue "A subjective feeling of tiredness characterized by a lack of energy and motivation." [HPO:probinson]
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 HP:0012735 Cough "A sudden, audible expulsion of air from the lungs through a partially closed glottis, preceded by inhalation." [HPO:probinson]
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 HP:0100658 Cellulitis 
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 HP:0100806 Sepsis 
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 HP:0200043 verrucae "Benign growths on the skin or mucous membranes that cause cosmetic problems as well as pain and discomfort. Warts most often occur on the hands, feet, and genital areas." [HPO:SKOEHLER]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000171488 LRRC8C / Q8TDW0 / leucine rich repeat containing 8 VRAC subunit C  / complex
 ENSG00000171492 LRRC8D / Q7L1W4 / leucine rich repeat containing 8 VRAC subunit D  / complex
 ENSG00000171017 LRRC8E / Q6NSJ5 / leucine rich repeat containing 8 VRAC subunit E  / complex
 ENSG00000197147 LRRC8B / Q6P9F7 / leucine rich repeat containing 8 VRAC subunit B  / complex






 

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