ENSG00000171385


Homo sapiens

Features
Gene ID: ENSG00000171385
  
Biological name :KCND3
  
Synonyms : KCND3 / potassium voltage-gated channel subfamily D member 3 / Q9UK17
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: -1
Band: p13.2
Gene start: 111770662
Gene end: 111989155
  
Corresponding Affymetrix probe sets: 211301_at (Human Genome U133 Plus 2.0 Array)   211827_s_at (Human Genome U133 Plus 2.0 Array)   213832_at (Human Genome U133 Plus 2.0 Array)   215014_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000358711
Ensembl peptide - ENSP00000306923
Ensembl peptide - ENSP00000319591
NCBI entrez gene - 3752     See in Manteia.
OMIM - 605411
RefSeq - XM_017001244
RefSeq - NM_004980
RefSeq - NM_172198
RefSeq - XM_005270851
RefSeq - XM_006710629
RefSeq - XM_006710630
RefSeq - XM_006710631
RefSeq Peptide - NP_004971
RefSeq Peptide - NP_751948
swissprot - Q9UK17
swissprot - A0A024R0C6
Ensembl - ENSG00000171385
  
Related genetic diseases (OMIM): 607346 - Spinocerebellar ataxia 19, 607346
  616399 - Brugada syndrome 9, 616399
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 kcnd3ENSDARG00000056101Danio rerio
 KCND3ENSGALG00000001512Gallus gallus
 Kcnd3ENSMUSG00000040896Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
KCND2 / Q9NZV8 / potassium voltage-gated channel subfamily D member 2ENSG0000018440874
KCND1 / Q9NSA2 / potassium voltage-gated channel subfamily D member 1ENSG0000010205765
KCNA5 / P22460 / potassium voltage-gated channel subfamily A member 5ENSG0000013003727
KCNC3 / Q14003 / potassium voltage-gated channel subfamily C member 3ENSG0000013139827
KCNC2 / Q96PR1 / potassium voltage-gated channel subfamily C member 2ENSG0000016600626
KCNC4 / Q03721 / potassium voltage-gated channel subfamily C member 4ENSG0000011639626
KCNA2 / P16389 / potassium voltage-gated channel subfamily A member 2ENSG0000017730126
KCNC1 / P48547 / potassium voltage-gated channel subfamily C member 1ENSG0000012915926
KCNA7 / Q96RP8 / potassium voltage-gated channel subfamily A member 7ENSG0000010484825
KCNA6 / P17658 / potassium voltage-gated channel subfamily A member 6ENSG0000015107925
KCNA3 / P22001 / potassium voltage-gated channel subfamily A member 3ENSG0000017727225
KCNA10 / Q16322 / potassium voltage-gated channel subfamily A member 10ENSG0000014310525
KCNA4 / P22459 / potassium voltage-gated channel subfamily A member 4ENSG0000018225525
KCNA1 / Q09470 / potassium voltage-gated channel subfamily A member 1ENSG0000011126225


Protein motifs (from Interpro)
Interpro ID Name
 IPR000210  BTB/POZ domain
 IPR003131  Potassium channel tetramerisation-type BTB domain
 IPR003968  Potassium channel, voltage dependent, Kv
 IPR003975  Potassium channel, voltage dependent, Kv4
 IPR004056  Potassium channel, voltage dependent, Kv4.3
 IPR005821  Ion transport domain
 IPR011333  SKP1/BTB/POZ domain superfamily
 IPR021645  Shal-type voltage-gated potassium channels, N-terminal
 IPR024587  Potassium channel, voltage dependent, Kv4, C-terminal
 IPR028325  Voltage-gated potassium channel


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0006813 potassium ion transport TAS
 biological_processGO:0034765 regulation of ion transmembrane transport IEA
 biological_processGO:0051260 protein homooligomerization IEA
 biological_processGO:0055085 transmembrane transport IEA
 biological_processGO:0061337 cardiac conduction TAS
 biological_processGO:0071435 potassium ion export IDA
 biological_processGO:0071805 potassium ion transmembrane transport IEA
 biological_processGO:0086009 membrane repolarization IDA
 biological_processGO:0086013 membrane repolarization during cardiac muscle cell action potential TAS
 biological_processGO:0086091 regulation of heart rate by cardiac conduction IMP
 biological_processGO:0097623 potassium ion export across plasma membrane ISS
 biological_processGO:0098915 membrane repolarization during ventricular cardiac muscle cell action potential IEA
 biological_processGO:0099625 ventricular cardiac muscle cell membrane repolarization IMP
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0008076 voltage-gated potassium channel complex IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030425 dendrite IEA
 cellular_componentGO:0042383 sarcolemma IEA
 cellular_componentGO:0042995 cell projection IEA
 molecular_functionGO:0005216 ion channel activity IEA
 molecular_functionGO:0005244 voltage-gated ion channel activity IEA
 molecular_functionGO:0005249 voltage-gated potassium channel activity IEA
 molecular_functionGO:0005250 A-type (transient outward) potassium channel activity TAS
 molecular_functionGO:0005267 potassium channel activity IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0044325 ion channel binding IPI
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0086008 voltage-gated potassium channel activity involved in cardiac muscle cell action potential repolarization TAS
 molecular_functionGO:1902282 voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization IMP


Pathways (from Reactome)
Pathway description
Voltage gated Potassium channels
Phase 1 - inactivation of fast Na+ channels


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0001260 Dysarthria "Dysarthric speech is a general description referring to a neurological speech disorder characterized by poor articulation. Depending on the involved neurological structures, dysarthria may be further classified as spastic, flaccid, ataxic, hyperkinetic and hypokinetic, or mixed." [HPO:curators]
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 HP:0001265 Hyporeflexia 
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 HP:0001272 Cerebellar atrophy 
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 HP:0001336 Myoclonus "Very brief, involuntary random muscular contractions occurring at rest, in response to sensory stimuli, or accompanying voluntary movements." [HPO:curators]
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 HP:0001347 Hyperreflexia "The presence of overactive or overresponsive reflexes." [HPO:curators]
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 HP:0001962 Palpitations 
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 HP:0002015 Dysphagia "Difficulty in swallowing." [HPO:curators]
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 HP:0002066 Gait ataxia "Impairment of the ability to coordinate the movements required for normal walking." [HPO:curators]
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 HP:0002070 Limb ataxia 
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 HP:0002073 Progressive cerebellar ataxia 
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 HP:0002078 Truncal ataxia 
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 HP:0002174 Postural tremor "A type of tremors that is triggered by holding a limb in a fixed position." [HPO:curators]
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 HP:0002396 Cogwheel rigidity 
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 HP:0003677 Slow progression 
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 HP:0007944 Intermittent microsaccadic pursuits 
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 HP:0007979 Gaze-evoked horizontal nystagmus "Horizontal nystagmus made apparent by looking to the right or to the left." [HPO:curators]
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 HP:0100543 Cognitive impairment "Abnormality in the process of thought including the ability to process information." [HPO:sdoelken]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000102057 KCND1 / Q9NSA2 / potassium voltage-gated channel subfamily D member 1  / complex
 ENSG00000120049 KCNIP2 / Q9NS61 / potassium voltage-gated channel interacting protein 2  / complex
 ENSG00000115041 KCNIP3 / Q9Y2W7 / potassium voltage-gated channel interacting protein 3  / complex
 ENSG00000171385 KCND3 / Q9UK17 / potassium voltage-gated channel subfamily D member 3  / complex
 ENSG00000182132 KCNIP1 / Q9NZI2 / potassium voltage-gated channel interacting protein 1  / complex
 ENSG00000184408 KCND2 / Q9NZV8 / potassium voltage-gated channel subfamily D member 2  / complex
 ENSG00000185774 KCNIP4 / Q6PIL6 / potassium voltage-gated channel interacting protein 4  / complex






 

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