ENSG00000006468


Homo sapiens

Features
Gene ID: ENSG00000006468
  
Biological name :ETV1
  
Synonyms : ETS variant 1 / ETV1 / P50549
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 7
Strand: -1
Band: p21.2
Gene start: 13891228
Gene end: 13991425
  
Corresponding Affymetrix probe sets: 206501_x_at (Human Genome U133 Plus 2.0 Array)   217053_x_at (Human Genome U133 Plus 2.0 Array)   217061_s_at (Human Genome U133 Plus 2.0 Array)   221910_at (Human Genome U133 Plus 2.0 Array)   221911_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000391043
Ensembl peptide - ENSP00000413836
Ensembl peptide - ENSP00000411626
Ensembl peptide - ENSP00000410819
Ensembl peptide - ENSP00000406931
Ensembl peptide - ENSP00000405327
Ensembl peptide - ENSP00000394710
Ensembl peptide - ENSP00000393078
Ensembl peptide - ENSP00000242066
Ensembl peptide - ENSP00000382293
Ensembl peptide - ENSP00000384085
Ensembl peptide - ENSP00000384138
Ensembl peptide - ENSP00000385381
Ensembl peptide - ENSP00000385551
Ensembl peptide - ENSP00000385686
NCBI entrez gene - 2115     See in Manteia.
OMIM - 600541
RefSeq - XM_011515170
RefSeq - NM_001163147
RefSeq - NM_001163148
RefSeq - NM_001163149
RefSeq - NM_001163150
RefSeq - NM_001163151
RefSeq - NM_001163152
RefSeq - NM_004956
RefSeq - XM_005249635
RefSeq - XM_005249636
RefSeq - XM_011515167
RefSeq - XM_011515168
RefSeq Peptide - NP_001156619
RefSeq Peptide - NP_001156620
RefSeq Peptide - NP_001156621
RefSeq Peptide - NP_001156622
RefSeq Peptide - NP_001156623
RefSeq Peptide - NP_001156624
RefSeq Peptide - NP_004947
swissprot - F8WEH6
swissprot - B5MCT2
swissprot - C9JX69
swissprot - C9J9L1
swissprot - C9J4P4
swissprot - C9J0B7
swissprot - P50549
swissprot - C9JQH6
Ensembl - ENSG00000006468
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 etv5aENSDARG00000069763Danio rerio
 ETV1ENSGALG00000035504Gallus gallus
 Etv1ENSMUSG00000004151Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ETV5 / P41161 / ETS variant 5ENSG0000024440564
ETV4 / P43268 / ETS variant 4ENSG0000017583256
ETS1 / P14921 / ETS proto-oncogene 1, transcription factorENSG0000013495422
ETS2 / P15036 / ETS proto-oncogene 2, transcription factorENSG0000015755721
ERG / P11308 / ERG, ETS transcription factorENSG0000015755419
FLI1 / Q01543 / Fli-1 proto-oncogene, ETS transcription factorENSG0000015170218
GABPA / Q06546 / GA binding protein transcription factor alpha subunitENSG0000015472716
ETV2 / O00321 / ETS variant 2ENSG0000010567215
FEV / Q99581 / FEV, ETS transcription factorENSG0000016349713
ELK4 / P28324 / ELK4, ETS transcription factorENSG0000015871113
ELK1 / P19419 / ELK1, ETS transcription factorENSG0000012676713
AC010616.1ENSG0000026804112
ELK3 / P41970 / ELK3, ETS transcription factorENSG0000011114512
ETV3 / P41162 / ETS variant 3ENSG0000011703612
ERF / P50548 / ETS2 repressor factorENSG0000010572212
ETV3L / Q6ZN32 / ETS variant 3 likeENSG0000025383111


Protein motifs (from Interpro)
Interpro ID Name
 IPR000418  Ets domain
 IPR006715  PEA3-type ETS-domain transcription factor, N-terminal
 IPR032928  ETS translocation variant 1
 IPR036388  Winged helix-like DNA-binding domain superfamily
 IPR036390  Winged helix DNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006366 transcription by RNA polymerase II TAS
 biological_processGO:0007411 axon guidance IEA
 biological_processGO:0007517 muscle organ development IEA
 biological_processGO:0007638 mechanosensory behavior IEA
 biological_processGO:0045893 positive regulation of transcription, DNA-templated IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IDA
 biological_processGO:0048935 peripheral nervous system neuron development TAS
 cellular_componentGO:0005634 nucleus IBA
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding IDA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding NAS
 molecular_functionGO:0001077 transcriptional activator activity, RNA polymerase II proximal promoter sequence-specific DNA binding IDA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity TAS
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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