ENSG00000062598


Homo sapiens

Features
Gene ID: ENSG00000062598
  
Biological name :ELMO2
  
Synonyms : ELMO2 / engulfment and cell motility 2 / Q96JJ3
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 20
Strand: -1
Band: q13.12
Gene start: 46366049
Gene end: 46432985
  
Corresponding Affymetrix probe sets: 1554857_at (Human Genome U133 Plus 2.0 Array)   220363_s_at (Human Genome U133 Plus 2.0 Array)   221528_s_at (Human Genome U133 Plus 2.0 Array)   55692_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000431972
Ensembl peptide - ENSP00000414329
Ensembl peptide - ENSP00000416181
Ensembl peptide - ENSP00000290246
Ensembl peptide - ENSP00000326172
Ensembl peptide - ENSP00000361249
Ensembl peptide - ENSP00000379673
Ensembl peptide - ENSP00000388962
NCBI entrez gene - 63916     See in Manteia.
OMIM - 606421
RefSeq - XM_017028011
RefSeq - NM_001318253
RefSeq - NM_133171
RefSeq - NM_182764
RefSeq - XM_005260496
RefSeq - XM_005260498
RefSeq - XM_005260499
RefSeq - XM_005260500
RefSeq - XM_005260501
RefSeq - XM_006723854
RefSeq - XM_017028009
RefSeq - XM_017028010
RefSeq Peptide - NP_877496
RefSeq Peptide - NP_001305182
RefSeq Peptide - NP_573403
swissprot - Q5JVZ8
swissprot - Q5JW01
swissprot - H0YCM7
swissprot - Q96JJ3
swissprot - Q5JVZ4
swissprot - Q5JVZ5
Ensembl - ENSG00000062598
  
Related genetic diseases (OMIM): 606893 - Vascular malformation, primary intraosseous, 606893
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 elmo2ENSDARG00000063527Danio rerio
 ELMO2ENSGALG00000007246Gallus gallus
 Elmo2ENSMUSG00000017670Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ELMO1 / Q92556 / engulfment and cell motility 1ENSG0000015584975
ELMO3 / Q96BJ8 / engulfment and cell motility 3ENSG0000010289050


Protein motifs (from Interpro)
Interpro ID Name
 IPR001849  Pleckstrin homology domain
 IPR006816  ELMO domain
 IPR011989  Armadillo-like helical
 IPR011993  PH-like domain superfamily
 IPR016024  Armadillo-type fold
 IPR024574  Domain of unknown function DUF3361
 IPR030713  Engulfment and cell motility protein 2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006909 phagocytosis IEA
 biological_processGO:0006915 apoptotic process IEA
 biological_processGO:0007010 cytoskeleton organization IEA
 biological_processGO:0016477 cell migration IEA
 biological_processGO:0038096 Fc-gamma receptor signaling pathway involved in phagocytosis TAS
 biological_processGO:0048010 vascular endothelial growth factor receptor signaling pathway TAS
 biological_processGO:0060326 cell chemotaxis IMP
 biological_processGO:0098609 cell-cell adhesion IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005488 binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0017124 SH3 domain binding IEA
 molecular_functionGO:0030971 receptor tyrosine kinase binding IPI


Pathways (from Reactome)
Pathway description
Regulation of actin dynamics for phagocytic cup formation
VEGFA-VEGFR2 Pathway
PTK6 Regulates RHO GTPases, RAS GTPase and MAP kinases


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
Show

 HP:0000169 Gingival fibromatosis "Gingival fibromatosis is characterized by a slowly progressive benign enlargement of the oral gingival tissues. The condition results in the teeth being partially or totally engulfed by keratinized gingiva, causing aesthetic and functional problems. Both genetic and pharmacologically induced forms of gingival fibromatosis are known. The most common genetic form, hereditary gingival fibromatosis (HGF), is usually transmitted as an autosomal dominant trait, although sporadic cases are common and autosomal recessive inheritance has been reported." [HPO:curators]
Show

 HP:0000189 Narrow palate "Width of the palate more than 2 SD below the mean (objective) or apparently decreased palatal width (subjective)." [pmid:19125428]
Show

 HP:0000225 Gingival bleeding 
Show

 HP:0000293 Full cheeks 
Show

 HP:0000405 Hearing loss, conductive 
Show

 HP:0000407 Hearing loss, sensorineural "Hearing loss caused by damage or dysfunction of the auditory nerve (cranial nerve VIII)." [HPO:curators]
Show

 HP:0000520 Proptosis 
Show

 HP:0000572 Visual loss 
Show

 HP:0000593 Abnormality of the anterior chamber "Abnormality of the anterior chamber, which is the space in the eye that is behind the cornea and in front of the iris." [HPO:curators]
Show

 HP:0000682 Abnormality of dental enamel "An abnormality of the dental enamel, which is the external layer of the teeth, being a highly mineralized substance consisting primarily of hydroxylapatite." [HPO:curators]
Show

 HP:0000684 Delayed dentition "Delayed eruption of teeth." [HPO:curators]
Show

 HP:0000819 Diabetes mellitus 
Show

 HP:0000962 Hyperkeratosis "Hyperkeratosis is thickening of the outer layer of the skin, the stratum corneum, which is composed of large, polyhedral, plate-like envelopes filled with keratin which are the dead cells that have migrated up from the stratum granulosum." [HPO:curators]
Show

 HP:0001249 Mental retardation 
Show

 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
Show

 HP:0001508 Failure to thrive 
Show

 HP:0001537 Umbilical hernia "Protrusion of abdominal contents through a defect in the abdominal wall musculature around the umbilicus. Skin and subcutaneous tissue overlie the defect." [HPO:curators]
Show

 HP:0002230 Generalized hirsutism "Abnormally increased hair growth over much of the entire body." [HPO:curators]
Show

 HP:0002516 Increased intracranial pressure 
Show

 HP:0002797 Osteolysis 
Show

 HP:0003155 Elevated alkaline phosphatase "Abnormally increased serum levels of `alkaline phosphatase activity` (GO:0004035)." [HPO:probinson]
Show

 HP:0007703 Abnormal retinal pigmentation 
Show

 HP:0100585 Teleangiectasia of the skin 
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000050820 BCAR1 / P56945 / BCAR1, Cas family scaffolding protein  / reaction / complex
 ENSG00000080824 P07900 / HSP90AA1 / heat shock protein 90 alpha family class A member 1  / complex / reaction
 ENSG00000089159 PXN / P49023 / paxillin  / reaction / complex
 ENSG00000112715 VEGFA / P15692 / vascular endothelial growth factor A  / complex / reaction
 ENSG00000128052 KDR / P35968 / kinase insert domain receptor  / complex / reaction
 ENSG00000136238 RAC1 / P63000 / Rac family small GTPase 1  / reaction
 ENSG00000150760 DOCK1 / Q14185 / dedicator of cytokinesis 1  / complex
 ENSG00000167193 CRK / P46108 / CRK proto-oncogene, adaptor protein  / complex / reaction
 ENSG00000160654 CD3G / P09693 / CD3g molecule  / reaction / complex
 ENSG00000143226 FCGR2A / P12318 / Fc fragment of IgG receptor IIa  / complex / reaction
 ENSG00000169398 PTK2 / Q05397 / protein tyrosine kinase 2  / reaction / complex
 ENSG00000198821 CD247 / P20963 / CD247 molecule  / reaction / complex
 ENSG00000197122 SRC / P12931 / SRC proto-oncogene, non-receptor tyrosine kinase  / complex / reaction
 ENSG00000203747 FCGR3A / P08637 / Fc fragment of IgG receptor IIIa  / reaction / complex
 ENSG00000150337 FCGR1A / P12314 / Fc fragment of IgG receptor Ia  / reaction / complex
 ENSG00000165025 SYK / P43405 / spleen associated tyrosine kinase  / reaction / complex
 ENSG00000211893 IGHG2 / P01859 / immunoglobulin heavy constant gamma 2 (G2m marker)  / reaction / complex
 ENSG00000211896 IGHG1 / P01857 / immunoglobulin heavy constant gamma 1 (G1m marker)  / complex / reaction
 ENSG00000211892 IGHG4 / P01861 / immunoglobulin heavy constant gamma 4 (G4m marker)  / complex / reaction
 ENSG00000107338 SHB / Q15464 / SH2 domain containing adaptor protein B  / reaction / complex






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   


© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr