ENSG00000117407


Homo sapiens

Features
Gene ID: ENSG00000117407
  
Biological name :ARTN
  
Synonyms : artemin / ARTN / Q5T4W7
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: 1
Band: p34.1
Gene start: 43933320
Gene end: 43937241
  
Corresponding Affymetrix probe sets: 207675_x_at (Human Genome U133 Plus 2.0 Array)   210237_at (Human Genome U133 Plus 2.0 Array)   216052_x_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000434856
Ensembl peptide - ENSP00000435140
Ensembl peptide - ENSP00000436727
Ensembl peptide - ENSP00000436149
Ensembl peptide - ENSP00000435804
Ensembl peptide - ENSP00000361429
Ensembl peptide - ENSP00000361434
Ensembl peptide - ENSP00000387435
Ensembl peptide - ENSP00000391998
Ensembl peptide - ENSP00000434071
Ensembl peptide - ENSP00000434784
NCBI entrez gene - 9048     See in Manteia.
OMIM - 603886
RefSeq - NM_001136215
RefSeq - NM_057090
RefSeq - NM_057091
RefSeq Peptide - NP_001129687
RefSeq Peptide - NP_476431
RefSeq Peptide - NP_476432
swissprot - Q5T4W7
swissprot - E9PLG3
swissprot - E9PIK2
swissprot - E9PN22
Ensembl - ENSG00000117407
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 artnaENSDARG00000096252Danio rerio
 ARTNENSGALG00000032098Gallus gallus
 ArtnENSMUSG00000028539Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
NRTN / Q99748 / neurturinENSG0000017111926
PSPN / O60542 / persephinENSG0000012565024
GDNF / P39905 / glial cell derived neurotrophic factorENSG0000016862124


Protein motifs (from Interpro)
Interpro ID Name
 IPR001839  Transforming growth factor-beta, C-terminal
 IPR029034  Cystine-knot cytokine


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000165 MAPK cascade TAS
 biological_processGO:0007165 signal transduction TAS
 biological_processGO:0007405 neuroblast proliferation TAS
 biological_processGO:0007411 axon guidance IEA
 biological_processGO:0007422 peripheral nervous system development IEA
 biological_processGO:0010469 regulation of signaling receptor activity IEA
 biological_processGO:0050930 induction of positive chemotaxis IEA
 biological_processGO:0061146 Peyer"s patch morphogenesis IEA
 biological_processGO:0065009 regulation of molecular function IEA
 biological_processGO:0097021 lymphocyte migration into lymphoid organs IEA
 cellular_componentGO:0005576 extracellular region TAS
 cellular_componentGO:0005615 extracellular space IEA
 cellular_componentGO:0005622 intracellular IEA
 molecular_functionGO:0005088 Ras guanyl-nucleotide exchange factor activity TAS
 molecular_functionGO:0005102 signaling receptor binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008083 growth factor activity IEA


Pathways (from Reactome)
Pathway description
NCAM1 interactions
RAF/MAP kinase cascade
RET signaling


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000124181 PLCG1 / P19174 / phospholipase C gamma 1  / reaction / complex
 ENSG00000125650 PSPN / O60542 / persephin  / reaction / complex
 ENSG00000109458 GAB1 / Q13480 / GRB2 associated binding protein 1  / complex
 ENSG00000141738 GRB7 / Q14451 / growth factor receptor bound protein 7  / complex / reaction
 ENSG00000168546 GFRA2 / O00451 / GDNF family receptor alpha 2  / reaction / complex
 ENSG00000171119 NRTN / Q99748 / neurturin  / reaction / complex
 ENSG00000146013 GFRA3 / O60609 / GDNF family receptor alpha 3  / complex / reaction
 ENSG00000125861 GFRA4 / Q9GZZ7 / GDNF family receptor alpha 4  / complex / reaction
 ENSG00000177885 GRB2 / P62993 / growth factor receptor bound protein 2  / complex / reaction
 ENSG00000165731 RET / P07949 / ret proto-oncogene  / complex / reaction
 ENSG00000149294 NCAM1 / P13591 / neural cell adhesion molecule 1  / reaction / complex
 ENSG00000106070 GRB10 / Q13322 / growth factor receptor bound protein 10  / complex / reaction
 ENSG00000168621 GDNF / P39905 / glial cell derived neurotrophic factor  / complex / reaction
 ENSG00000033327 GAB2 / Q9UQC2 / GRB2 associated binding protein 2  / complex
 ENSG00000151892 GFRA1 / P56159 / GDNF family receptor alpha 1  / complex / reaction
 ENSG00000160691 SHC1 / P29353 / SHC adaptor protein 1  / complex / reaction
 ENSG00000076864 P47736 / RAP1GAP / RAP1 GTPase activating protein  / complex / reaction
 ENSG00000166225 FRS2 / Q8WU20 / fibroblast growth factor receptor substrate 2  / complex / reaction
 ENSG00000145675 P27986 / PIK3R1 / phosphoinositide-3-kinase regulatory subunit 1  / complex
 ENSG00000179295 PTPN11 / Q06124 / protein tyrosine phosphatase, non-receptor type 11  / reaction / complex
 ENSG00000115904 SOS1 / Q07889 / SOS Ras/Rac guanine nucleotide exchange factor 1  / reaction / complex
 ENSG00000051382 P42338 / PIK3CB / phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta  / complex
 ENSG00000121879 P42336 / PIK3CA / phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha  / complex
 ENSG00000117407 ARTN / Q5T4W7 / artemin  / reaction / complex
 ENSG00000171608 O00329 / PIK3CD / phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta  / complex
 ENSG00000197122 SRC / P12931 / SRC proto-oncogene, non-receptor tyrosine kinase  / complex / reaction






 

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