ENSG00000170734


Homo sapiens

Features
Gene ID: ENSG00000170734
  
Biological name :POLH
  
Synonyms : DNA polymerase eta / POLH / Q9Y253
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 6
Strand: 1
Band: p21.1
Gene start: 43576150
Gene end: 43615660
  
Corresponding Affymetrix probe sets: 1557700_at (Human Genome U133 Plus 2.0 Array)   1557701_s_at (Human Genome U133 Plus 2.0 Array)   219380_x_at (Human Genome U133 Plus 2.0 Array)   222879_s_at (Human Genome U133 Plus 2.0 Array)   231115_at (Human Genome U133 Plus 2.0 Array)   233852_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000405320
Ensembl peptide - ENSP00000361300
Ensembl peptide - ENSP00000361310
NCBI entrez gene - 5429     See in Manteia.
OMIM - 603968
RefSeq - XM_011514698
RefSeq - NM_001291969
RefSeq - NM_001291970
RefSeq - NM_006502
RefSeq - XM_005249186
RefSeq Peptide - NP_001278899
RefSeq Peptide - NP_006493
RefSeq Peptide - NP_001278898
swissprot - Q5JTF2
swissprot - Q9Y253
swissprot - A0A024RD62
Ensembl - ENSG00000170734
  
Related genetic diseases (OMIM): 278750 - Xeroderma pigmentosum, variant type, 278750
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 polhENSDARG00000070231Danio rerio
 POLHENSGALG00000010317Gallus gallus
 PolhENSMUSG00000023953Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
POLI / Q9UNA4 / DNA polymerase iotaENSG0000010175122
REV1 / Q9UBZ9 / REV1, DNA directed polymeraseENSG0000013594519
POLK / Q9UBT6 / DNA polymerase kappaENSG0000012200818


Protein motifs (from Interpro)
Interpro ID Name
 IPR001126  UmuC domain
 IPR017061  DNA polymerase eta/kappa/iota/IV
 IPR017961  DNA polymerase, Y-family, little finger domain
 IPR036775  DNA polymerase, Y-family, little finger domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000731 DNA synthesis involved in DNA repair IDA
 biological_processGO:0006260 DNA replication IEA
 biological_processGO:0006281 DNA repair IEA
 biological_processGO:0006282 regulation of DNA repair TAS
 biological_processGO:0006290 pyrimidine dimer repair IEA
 biological_processGO:0006301 postreplication repair IEA
 biological_processGO:0006974 cellular response to DNA damage stimulus IEA
 biological_processGO:0010225 response to UV-C IDA
 biological_processGO:0019985 translesion synthesis TAS
 biological_processGO:0070987 error-free translesion synthesis TAS
 biological_processGO:0071494 cellular response to UV-C IEA
 biological_processGO:0071897 DNA biosynthetic process IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0005829 cytosol IDA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003684 damaged DNA binding TAS
 molecular_functionGO:0003887 DNA-directed DNA polymerase activity TAS
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016779 nucleotidyltransferase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Translesion Synthesis by POLH
Termination of translesion DNA synthesis
HDR through Homologous Recombination (HRR)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000491 Keratitis "Inflammation of the cornea." [HPO:curators]
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 HP:0000509 Conjunctivitis "Inflammation of the conjunctiva." [HPO:curators]
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 HP:0000613 Photophobia "Excessive sensitivity to light with the sensation of discomfort or pain in the eyes due to exposure to bright light." [HPO:curators]
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 HP:0000621 Entropion "An abnormal turning inward of the upper and/or lower eyelid." [HPO:sdoelken]
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 HP:0000656 Ectropion "An abnormal turning outward of the lower eyelid." [HPO:sdoelken]
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 HP:0000958 Dry skin 
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 HP:0000992 Photosensitivity "An increased sensitivity of the skin to light. Photosensitivity may result in a rash upon exposure to the sun (which is known as photodermatosis). Photosensitivity can be diagnosed by phototests in which light is shone on small areas of skin." [HPO:curators]
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 HP:0001009 Telangiectasia "Telangiectasias refer to small dilated blood vessels located near the surface of the skin or mucous membranes, measuring between 0.5 and 1 millimeter in diameter." [HPO:curators]
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 HP:0001010 Hypopigmentation of the skin 
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 HP:0001029 Poikiloderma 
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 HP:0002671 Basal cell carcinoma 
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 HP:0002860 Squamous cell carcinoma 
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 HP:0002861 Malignant melanoma "A malignant skin tumor of originating from melanocytes, pigment cells normally present in the epidermis and sometimes in the dermis." [HPO:curators]
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 HP:0004334 Dermal atrophy "Partial or complete wasting (atrophy) of the skin." [HPO:curators]
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 HP:0007603 Freckles in sun-exposed areas 
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 HP:0012056 Cutaneous melanoma "The presence of a `melanoma` (MPATH:359) of the `skin` (FMA:7163)." [HPO:probinson]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000106399 RPA3 / P35244 / replication protein A3  / complex / reaction
 ENSG00000070010 UFD1 / Q92890 / ubiquitin recognition factor in ER associated degradation 1  / complex / reaction
 ENSG00000132383 RPA1 / P27694 / replication protein A1  / reaction / complex
 ENSG00000117748 RPA2 / P15927 / replication protein A2  / complex / reaction
 ENSG00000182446 NPLOC4 / Q8TAT6 / NPL4 homolog, ubiquitin recognition factor  / complex / reaction
 ENSG00000165280 VCP / P55072 / valosin containing protein  / complex / reaction
 ENSG00000121060 Q14258 / TRIM25 / tripartite motif containing 25  / reaction / complex
 ENSG00000163743 RCHY1 / Q96PM5 / ring finger and CHY zinc finger domain containing 1  / complex / reaction
 ENSG00000132646 PCNA / P12004 / proliferating cell nuclear antigen  / complex / reaction
 ENSG00000187608 ISG15 / P05161 / ISG15 ubiquitin-like modifier  / reaction
 ENSG00000182179 UBA7 / P41226 / ubiquitin like modifier activating enzyme 7  / reaction
 ENSG00000156587 O14933 / UBE2L6 / ubiquitin conjugating enzyme E2 L6  / reaction / complex
 ENSG00000010072 SPRTN / Q9H040 / SprT-like N-terminal domain  / reaction / complex






 

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