ENSMUSG00000001288


Mus musculus

Features
Gene ID: ENSMUSG00000001288
  
Biological name :Rarg
  
Synonyms : P18911 / Rarg / Retinoic acid receptor gamma
  
Possible biological names infered from orthology : P13631
  
Species: Mus musculus
  
Chr. number: 15
Strand: -1
Band: F3
Gene start: 102234938
Gene end: 102257517
  
Corresponding Affymetrix probe sets: 10432972 (MoGene1.0st)   1419415_a_at (Mouse Genome 430 2.0 Array)   1419416_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000155670
Ensembl peptide - ENSMUSP00000048838
Ensembl peptide - ENSMUSP00000067266
Ensembl peptide - ENSMUSP00000118615
Ensembl peptide - ENSMUSP00000155448
NCBI entrez gene - 19411     See in Manteia.
MGI - MGI:97858
RefSeq - XM_011245525
RefSeq - XM_006520650
RefSeq - NM_011244
RefSeq - NM_001042727
RefSeq Peptide - NP_035374
RefSeq Peptide - NP_001036192
swissprot - P18911
swissprot - D3YZY4
Ensembl - ENSMUSG00000001288
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rargaENSDARG00000034117Danio rerio
 rargbENSDARG00000054003Danio rerio
 RARGENSG00000172819Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Rarb / P22605 / retinoic acid receptor, beta / P10826*ENSMUSG0000001749172
Rara / P11416 / retinoic acid receptor, alpha / P10276*ENSMUSG0000003799268
Thra / P63058 / Thyroid hormone receptor alpha / P10827*ENSMUSG0000005875629
Thrb / P37242 / Thyroid hormone receptor beta / P10828*ENSMUSG0000002177928
Nr1h2 / Q60644 / Oxysterols receptor LXR-beta / P55055* / nuclear receptor subfamily 1 group H member 2*ENSMUSG0000006060128
Nr1h3 / Q9Z0Y9 / Mus musculus nuclear receptor subfamily 1, group H, member 3 (Nr1h3), transcript variant 3, mRNA. / Q13133* / nuclear receptor subfamily 1 group H member 3*ENSMUSG0000000210827
Nr1h4 / Q60641 / Bile acid receptor / Q96RI1* / nuclear receptor subfamily 1 group H member 4*ENSMUSG0000004763824
Nr1i2 / O54915 / Nuclear receptor subfamily 1 group I member 2 / O75469*ENSMUSG0000002280924
Vdr / P48281 / vitamin D (1,25-dihydroxyvitamin D3) receptor / P11473* / vitamin D receptor*ENSMUSG0000002247923
Nr1i3 / O35627 / Nuclear receptor subfamily 1 group I member 3 / Q14994*ENSMUSG0000000567722
Nr1h5ENSMUSG0000004893822


Protein motifs (from Interpro)
Interpro ID Name
 IPR000536  Nuclear hormone receptor, ligand-binding domain
 IPR001628  Zinc finger, nuclear hormone receptor-type
 IPR001723  Nuclear hormone receptor
 IPR003078  Retinoic acid receptor
 IPR013088  Zinc finger, NHR/GATA-type
 IPR035500  Nuclear hormone receptor-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IDA
 biological_processGO:0001843 neural tube closure IGI
 biological_processGO:0002063 chondrocyte development IMP
 biological_processGO:0002068 glandular epithelial cell development IGI
 biological_processGO:0003406 retinal pigment epithelium development IGI
 biological_processGO:0003417 growth plate cartilage development IGI
 biological_processGO:0003430 growth plate cartilage chondrocyte growth IMP
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0008284 positive regulation of cell proliferation IGI
 biological_processGO:0008285 negative regulation of cell proliferation IGI
 biological_processGO:0009952 anterior/posterior pattern specification IMP
 biological_processGO:0010468 regulation of gene expression IGI
 biological_processGO:0010628 positive regulation of gene expression IDA
 biological_processGO:0031076 embryonic camera-type eye development IGI
 biological_processGO:0031641 regulation of myelination IEA
 biological_processGO:0032331 negative regulation of chondrocyte differentiation IMP
 biological_processGO:0032526 response to retinoic acid ISO
 biological_processGO:0035116 embryonic hindlimb morphogenesis IGI
 biological_processGO:0035264 multicellular organism growth IGI
 biological_processGO:0043010 camera-type eye development IGI
 biological_processGO:0043065 positive regulation of apoptotic process IGI
 biological_processGO:0043066 negative regulation of apoptotic process IGI
 biological_processGO:0043068 positive regulation of programmed cell death IGI
 biological_processGO:0043401 steroid hormone mediated signaling pathway IEA
 biological_processGO:0045596 negative regulation of cell differentiation IMP
 biological_processGO:0045637 regulation of myeloid cell differentiation IGI
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IGI
 biological_processGO:0048048 embryonic eye morphogenesis IGI
 biological_processGO:0048384 retinoic acid receptor signaling pathway IEA
 biological_processGO:0048608 reproductive structure development IMP
 biological_processGO:0048732 gland development IMP
 biological_processGO:0060041 retina development in camera-type eye IGI
 biological_processGO:0060173 limb development IMP
 biological_processGO:0060324 face development IGI
 biological_processGO:0060348 bone development IMP
 biological_processGO:0060349 bone morphogenesis IMP
 biological_processGO:0060429 epithelium development IMP
 biological_processGO:0060534 trachea cartilage development IMP
 biological_processGO:0060740 prostate gland epithelium morphogenesis IMP
 biological_processGO:0061037 negative regulation of cartilage development IMP
 biological_processGO:0070384 Harderian gland development IMP
 biological_processGO:0071300 cellular response to retinoic acid IDA
 biological_processGO:1990830 cellular response to leukemia inhibitory factor IEP
 cellular_componentGO:0000790 nuclear chromatin IDA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0005667 transcription factor complex IDA
 molecular_functionGO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding IDA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0003707 steroid hormone receptor activity IEA
 molecular_functionGO:0003708 retinoic acid receptor activity IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0046965 retinoid X receptor binding IMP


Pathways (from Reactome)
Pathway description
Nuclear Receptor transcription pathway
Signaling by Retinoic Acid


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0000079 abnormal basioccipital bone morphology "malformed basilar process of the occipital bone" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:55583]
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Allelic Composition: Hoxd4tm1Bhr/Hoxd4tm1Bhr,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas * 129S7/SvEvBrd * CD-1

Allelic Composition: Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas * C57BL/6

Allelic Composition: Rarbtm1Mma/Rarbtm1Mma,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas * C57BL/6

Allelic Composition: Rarbtm1Mma/Rarb+,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas * C57BL/6

Allelic Composition: Rarbtm1Mma/Rarbtm1Mma,Rargtm1Ipc/Rarg+
Genetic Background: involves: 129S2/SvPas * C57BL/6

 MP:0000137 abnormal vertebrae morphology "malformed bony segment of the spinal column" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8]
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Allelic Composition: Rarbtm1Mma/Rarbtm1Mma,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas * C57BL/6

Allelic Composition: Rarbtm1Mma/Rarb+,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas * C57BL/6

 MP:0000154 rib fusion "appearance of one or more ribs as a single structure" [J:62022, J:62023]
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Allelic Composition: Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas

 MP:0000157 abnormal sternum morphology "malformed long flat bone of the chest; articulates with clavicle and first seven rib pairs" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:19212]
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Allelic Composition: Rarbtm1Mma/Rarbtm1Mma,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas * C57BL/6

Allelic Composition: Rarbtm1Mma/Rarbtm1Mma,Rargtm1Ipc/Rarg+
Genetic Background: involves: 129S2/SvPas * C57BL/6

 MP:0000163 abnormal cartilage morphology "anomalous structure or development of the nonvascular, resilient, flexible connective tissue found primarily in joints, walls of the throax, and tubular structures, but which also comprises most of the skeleton in early fetal life " [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
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Allelic Composition: Smad4E6sad/Smad4+
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

 MP:0000284 double outlet right ventricle "both the aorta and the pulmonary trunk originate from the right ventricle, usually in conjunction with a ventricular septal defect" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8, J:67826]
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Allelic Composition: Raratm2Ipc/Raratm2Ipc,Raratm1Ipc/Rara+,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas

 MP:0000519 hydronephrosis "dilation of the pelvis and calices of one or both kidneys" [J:56641]
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Allelic Composition: Rarbtm1Mma/Rarbtm1Mma,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas * C57BL/6

 MP:0000520 absent kidney "missing paired organs that excrete urine" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:49471]
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Allelic Composition: Raratm1Ipc/Raratm1Ipc,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas

Allelic Composition: Raratm1Ipc/Raratm1Ipc,Rargtm4Ipc/Rargtm4Ipc
Genetic Background: involves: 129/Sv * 129S2/SvPas

 MP:0000534 abnormal ureter morphology "anomalous structure of the tube that conducts the urine from the renal pelvis to the bladder" [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
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Allelic Composition: Rarbtm1Mma/Rarbtm1Mma,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas * C57BL/6

 MP:0001120 abnormal uterus morphology "malformation or absence of the female muscular organ of gestation" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: Raratm1Ipc/Raratm1Ipc,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas

 MP:0001158 abnormal prostate morphology "mallformed gland in males that secretes part of the seminiferous fluid" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8, J:63764]
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Allelic Composition: Ttpatm1Hsz/Ttpatm1Hsz
Genetic Background: involves: 129S7/SvEvBrd * C57BL/6J

 MP:0001196 shiny skin "skin with a glossy or glistening appearance" [J:56641]
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Allelic Composition: Ttpatm1Hsz/Ttpatm1Hsz
Genetic Background: involves: 129S7/SvEvBrd * C57BL/6J

Allelic Composition: Rargtm3Ipc/Rargtm3Ipc,Tg(KRT14-cre)1Ipc/0
Genetic Background: involves: C57BL/6 * SJL

 MP:0001216 abnormal epidermal layer morphology "anomalous structure or development of the superficial epithelial portion of the skin" [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
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Allelic Composition: Rargtm3Ipc/Rargtm3Ipc,Tg(KRT14-cre/ERT2)1Ipc/0
Genetic Background: Not Specified

 MP:0001240 abnormal cornified layer morphology "structural or developmental anomaly of the outer layer of the epidermis, consisting of several layers of flat keratinized non-nucleated cells" [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
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Allelic Composition: Ttpatm1Hsz/Ttpatm1Hsz
Genetic Background: involves: 129S7/SvEvBrd * C57BL/6J

Allelic Composition: Rargtm3Ipc/Rargtm3Ipc,Tg(CMV-cre/ERT)1Ipc/0
Genetic Background: involves: C57BL/6 * SJL

Allelic Composition: Rargtm3Ipc/Rargtm3Ipc,Tg(KRT14-cre/ERT2)1Ipc/0
Genetic Background: Not Specified

Allelic Composition: Rargtm3Ipc/Rargtm3Ipc,Tg(KRT14-cre)1Ipc/0
Genetic Background: involves: C57BL/6 * SJL

 MP:0001262 decreased body weight "lower than normal average weight " [J:61295]
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Allelic Composition: Ttpatm1Hsz/Ttpatm1Hsz
Genetic Background: involves: 129S7/SvEvBrd * C57BL/6J

Allelic Composition: Rargtm1Blt/Rargtm1Blt
Genetic Background: involves: 129P2/OlaHsd * C57BL/6J

 MP:0001265 reduced body size "smaller than average body weight, height and/or length of an organism compared to controls" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8, J:23170]
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Allelic Composition: Hprttm6Detl/Y
Genetic Background: involves: 129S1/Sv * 129X1/SvJ * C57BL/6J

 MP:0001286 abnormal eye development "malformation or arrest of differentiation of the visual organ" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, MGI:cls, J:49840]
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Allelic Composition: Aldh1a1tm1.1Ngb/Aldh1a1tm1.1Ngb,Aldh1a3tm1.1Pcn/Aldh1a3tm1.1Pcn
Genetic Background: involves: 129/Sv * C57BL/6 * SJL

 MP:0001303 abnormal lens morphology "malformed transparent structure of the eye responsible for focusing light rays" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:40203]
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Allelic Composition: Rarbtm1Mma/Rarbtm1Mma,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas * C57BL/6

 MP:0001325 abnormal retina morphology "structural or developmental anomaly of the thin layer of neural tissue lining the back of the eyeball which contains visual receptors " [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
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Allelic Composition: Rarbtm1Mma/Rarbtm1Mma,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas * C57BL/6

 MP:0001340 abnormal eyelid morphology "malformation of the skin folds covering the front of the eyeball" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: Ttpatm1Hsz/Ttpatm1Hsz
Genetic Background: involves: 129S7/SvEvBrd * C57BL/6J

 MP:0001732 postnatal growth retardation "slow or limited development after birth " [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
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Allelic Composition: Abcc8tm1.1Mgn/Abcc8tm1.1Mgn
Genetic Background: involves: 129X1/SvJ * C57BL/6

Allelic Composition: Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas

 MP:0001922 reduced male fertility "reduced ability of male to produce live offspring" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:61340]
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Allelic Composition: Rargtm1Blt/Rargtm1Blt
Genetic Background: involves: 129P2/OlaHsd * C57BL/6J

 MP:0001925 male infertility "inability of male to produce live offspring" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:60409]
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Allelic Composition: Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas

Allelic Composition: Hoxd4tm1Bhr/Hoxd4tm1Bhr,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas * 129S7/SvEvBrd * CD-1

Allelic Composition: Rargtm3.1Ipc/Rargtm3.1Ipc
Genetic Background: involves: C57BL/6 * SJL

 MP:0002060 abnormal skin morphology "malformation or atypical structure of the membranous protective covering of the body" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8, J:56777]
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Allelic Composition: Postntm1Sjc/Postntm1Sjc
Genetic Background: involves: C57BL/6

Allelic Composition: Rargtm3Ipc/Rargtm3Ipc,Tg(KRT14-cre/ERT2)1Ipc/0
Genetic Background: Not Specified

 MP:0002081 perinatal lethality "death anytime between E18.5 and postnatal day 1 " [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: Tlr3tm1Flv/Tlr3tm1Flv
Genetic Background: involves: C57BL/6

Allelic Composition: Raratm2Ipc/Raratm2Ipc,Raratm1Ipc/Rara+,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas

Allelic Composition: Rarbtm1Ipc/Rarbtm1Ipc,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas

Allelic Composition: Raratm1Ipc/Raratm1Ipc,Rargtm4Ipc/Rargtm4Ipc
Genetic Background: involves: 129/Sv * 129S2/SvPas

 MP:0002083 premature death "death after 3 weeks of age, but before normal life span" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: Ttpatm1Hsz/Ttpatm1Hsz
Genetic Background: involves: 129S7/SvEvBrd * C57BL/6J

Allelic Composition: Rargtm1Blt/Rargtm1Blt
Genetic Background: involves: 129P2/OlaHsd * C57BL/6J

 MP:0002113 abnormal skeleton development "anomalous differentiation or remodeling of bone tissue resulting in morphological abnormality" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: Ttpatm1Hsz/Ttpatm1Hsz
Genetic Background: involves: 129S7/SvEvBrd * C57BL/6J

 MP:0002114 abnormal axial skeleton morphology "abnormal development of vertebral, spinal or sternal bones resulting in morphological abnormality" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: Ttpatm1Hsz/Ttpatm1Hsz
Genetic Background: involves: 129S7/SvEvBrd * C57BL/6J

Allelic Composition: Raratm1Ipc/Raratm1Ipc,Rargtm4Ipc/Rargtm4Ipc
Genetic Background: involves: 129/Sv * 129S2/SvPas

Allelic Composition: Raratm1Ipc/Raratm1Ipc,Rargtm2Ipc/Rargtm2Ipc
Genetic Background: involves: 129S2/SvPas

 MP:0002127 abnormal cardiovascular system morphology "abnormal development of the heart or vascular tissue resulting in morphological abnormality" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: Hoxa3tm1Mrc/Hoxa3tm1Mrc
Genetic Background: involves: 129S7/SvEvBrd

Allelic Composition: Raratm2Ipc/Raratm2Ipc,Raratm1Ipc/Rara+,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas

 MP:0002132 abnormal respiratory system morphology "anomalous structure of pulmonary tissues " [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: Raratm1Ipc/Raratm1Ipc,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas

Allelic Composition: Raratm2Ipc/Raratm2Ipc,Raratm1Ipc/Rara+,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas

 MP:0002169 no phenotype detected "normal, viable and fertile appearance and behavior; indistinguishable from controls" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas

 MP:0002191 abnormal artery morphology "malformation of the blood vessels that carry blood away from the heart" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8, csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: Rarbtm1Mma/Rarbtm1Mma,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas * C57BL/6

 MP:0002257 abnormal arytenoid cartilage morphology "any structural anomaly of the paired triangular cartilages located postlaterally at the level of the thyroid cartilage " [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator, Pathology , 2nd edition:ISBN 0-397-51047-0]
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Allelic Composition: Raratm1Ipc/Raratm1Ipc,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas

Allelic Composition: Raratm2Ipc/Raratm2Ipc,Raratm1Ipc/Rara+,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas

 MP:0002258 abnormal cricoid cartilage morphology "any structural anomaly of the most inferior of the laryngeal cartilages " [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator, Pathology , 2nd edition:ISBN 0-397-51047-0]
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Allelic Composition: Abcc8tm1.1Mgn/Abcc8tm1.1Mgn
Genetic Background: involves: 129X1/SvJ * C57BL/6

Allelic Composition: Rargtm4Ipc/Rarg+
Genetic Background: involves: 129/Sv

Allelic Composition: Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas

Allelic Composition: Raratm1Ipc/Raratm1Ipc,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas

Allelic Composition: Raratm2Ipc/Raratm2Ipc,Raratm1Ipc/Rara+,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas

Allelic Composition: Raratm1Ipc/Raratm1Ipc,Rargtm4Ipc/Rargtm4Ipc
Genetic Background: involves: 129/Sv * 129S2/SvPas

Allelic Composition: Raratm1Ipc/Raratm1Ipc,Rargtm2Ipc/Rargtm2Ipc
Genetic Background: involves: 129S2/SvPas

Allelic Composition: Rarbtm1Mma/Rarb+,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas * C57BL/6

 MP:0002260 abnormal thyroid cartilage morphology "any structural anomaly of the largest of the laryngeal cartilages " [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator, Pathology , 2nd edition:ISBN 0-397-51047-0]
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Allelic Composition: Raratm1Ipc/Raratm1Ipc,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas

Allelic Composition: Raratm2Ipc/Raratm2Ipc,Raratm1Ipc/Rara+,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas

Allelic Composition: Raratm1Ipc/Raratm1Ipc,Rargtm4Ipc/Rargtm4Ipc
Genetic Background: involves: 129/Sv * 129S2/SvPas

Allelic Composition: Raratm1Ipc/Raratm1Ipc,Rargtm2Ipc/Rargtm2Ipc
Genetic Background: involves: 129S2/SvPas

 MP:0002633 persistent truncus arteriosis "complete failure of the common arterial trunk opening out of both ventricles to divide into the aorta and pulmonary artery during development" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8, pvb:Pierre Vanden Borre , Mouse Genome Informatics Curator]
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Allelic Composition: Raratm1Ipc/Raratm1Ipc,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas

Allelic Composition: Raratm1Ipc/Raratm1Ipc,Rargtm4Ipc/Rargtm4Ipc
Genetic Background: involves: 129/Sv * 129S2/SvPas

 MP:0002655 abnormal keratinocyte morphology "structural or developmental anomaly of the cells of the epidermis that produce keratin in the process of differentiating into the dead and fully keratinized cells of the stratum corneum" [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
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Allelic Composition: Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas

Allelic Composition: Rargtm3Ipc/Rargtm3Ipc,Tg(CMV-cre/ERT)1Ipc/0
Genetic Background: involves: C57BL/6 * SJL

Allelic Composition: Rargtm3Ipc/Rargtm3Ipc,Tg(KRT14-cre/ERT2)1Ipc/0
Genetic Background: Not Specified

Allelic Composition: Rargtm3Ipc/Rargtm3Ipc,Tg(KRT14-cre)1Ipc/0
Genetic Background: involves: C57BL/6 * SJL

 MP:0002699 abnormal vitreous body "anomalies of the transparent, semigelatinous substance that fills the cavity behind the crystalline lens of the eye and in front of the retina" [MeSH:National Library of Medicine - Medical Subject Headings , 2003]
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Allelic Composition: Rarbtm1Mma/Rarbtm1Mma,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas * C57BL/6

 MP:0002747 abnormal aortic valve morphology "malformation of the valve between the left ventricle and the ascending aorta" [J:82728, pvb:Pierre Vanden Borre , Mouse Genome Informatics Curator]
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Allelic Composition: Raratm1Ipc/Raratm1Ipc,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas

Allelic Composition: Raratm2Ipc/Raratm2Ipc,Raratm1Ipc/Rara+,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas

 MP:0002796 impaired skin barrier function "impaired ability of the skin to regulate water loss; frequently leads to dehydration" [J:56641]
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Allelic Composition: Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas

Allelic Composition: Rargtm3Ipc/Rargtm3Ipc,Tg(KRT14-cre)1Ipc/0
Genetic Background: involves: C57BL/6 * SJL

 MP:0002840 abnormal lens fibers morphology "structural anomaly of the elongated cells of the crystalline lens of the eye" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8]
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Allelic Composition: Rarbtm1Mma/Rarbtm1Mma,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas * C57BL/6

 MP:0003007 ectopic thymus "ectopic location of the thymus primordium, which normally resides in the superior mediastinum and lower part of the neck" [ava:Anna V. Anagnostopoulos , Mouse Genome Informatics Curator, J:76015]
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Allelic Composition: Raratm1Ipc/Raratm1Ipc,Rargtm2Ipc/Rargtm2Ipc
Genetic Background: involves: 129S2/SvPas

 MP:0003036 vertebral transformation "homeotic transformation of a specific vertebrae to adopt the fate of another" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas

Allelic Composition: Rarbtm1Mma/Rarbtm1Mma,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas * C57BL/6

Allelic Composition: Rarbtm1Mma/Rarb+,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas * C57BL/6

 MP:0003047 abnormal thoracic vertebrae morphology "malformation of any or all of the thirteen bony segments of the spine located anterior to the lumbar vertebrae and posterior to the cervical vertebrae" [MeSH:National Library of Medicine - Medical Subject Headings, 2003, csmith:Cynthia L. Smith, Mouse Genome Informatics Curator]
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Allelic Composition: Raratm1Ipc/Raratm1Ipc,Rargtm4Ipc/Rargtm4Ipc
Genetic Background: involves: 129/Sv * 129S2/SvPas

Allelic Composition: Raratm1Ipc/Raratm1Ipc,Rargtm2Ipc/Rargtm2Ipc
Genetic Background: involves: 129S2/SvPas

 MP:0003048 abnormal cervical vertebrae morphology "malformation of any or all of the seven bony segments of the spine located anterior to the thoracic vertebrae" [MeSH:National Library of Medicine - Medical Subject Headings, 2003, csmith:Cynthia L. Smith, Mouse Genome Informatics Curator]
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Allelic Composition: Abcc8tm1.1Mgn/Abcc8tm1.1Mgn
Genetic Background: involves: 129X1/SvJ * C57BL/6

Allelic Composition: Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas

Allelic Composition: Hoxd4tm1Bhr/Hoxd4tm1Bhr,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas * 129S7/SvEvBrd * CD-1

Allelic Composition: Raratm1Ipc/Raratm1Ipc,Rargtm4Ipc/Rargtm4Ipc
Genetic Background: involves: 129/Sv * 129S2/SvPas

Allelic Composition: Raratm1Ipc/Raratm1Ipc,Rargtm2Ipc/Rargtm2Ipc
Genetic Background: involves: 129S2/SvPas

 MP:0003049 abnormal lumbar vertebrae morphology "malformation of any or all of the six bony segments of the spine located anterior to the sacral vertebrae and posterior to the thoracic vertebrae" [MeSH:National Library of Medicine - Medical Subject Headings, 2003, csmith:Cynthia L. Smith, Mouse Genome Informatics Curator]
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Allelic Composition: Raratm1Ipc/Raratm1Ipc,Rargtm4Ipc/Rargtm4Ipc
Genetic Background: involves: 129/Sv * 129S2/SvPas

Allelic Composition: Raratm1Ipc/Raratm1Ipc,Rargtm2Ipc/Rargtm2Ipc
Genetic Background: involves: 129S2/SvPas

 MP:0003056 abnormal hyoid bone "anomalous structure of the U-shaped bone lying between the mandible and the larynx that supports the tongue muscles" [Stedman s Medical Dictionary, 27th edition:ISBN 0-683-40008-8, hdene:Howard Dene, Mouse Genome Informatics Curator]
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Allelic Composition: Raratm1Ipc/Raratm1Ipc,Rargtm4Ipc/Rargtm4Ipc
Genetic Background: involves: 129/Sv * 129S2/SvPas

 MP:0003120 abnormal tracheal cartilage "any structural anomaly of the cartilaginous structures that support the trachea" [smb:Susan M. Bello, Mouse Genome Informatics Curator, J:97123]
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Allelic Composition: Raratm1Ipc/Raratm1Ipc,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas

Allelic Composition: Rarbtm1Ipc/Rarbtm1Ipc,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas

Allelic Composition: Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas * C57BL/6

Allelic Composition: Rarbtm1Mma/Rarbtm1Mma,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas * C57BL/6

Allelic Composition: Rarbtm1Mma/Rarb+,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas * C57BL/6

 MP:0003235 abnormal alisphenoid bone morphology "malformation in either of the broad curved winglike expanses on each side of the sphenoid bone" [smb:Susan M Bello, Mouse Genome Informatics Curator, J:93183, Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8]
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Allelic Composition: Raratm1Ipc/Raratm1Ipc,Rargtm4Ipc/Rargtm4Ipc
Genetic Background: involves: 129/Sv * 129S2/SvPas

Allelic Composition: Raratm1Ipc/Raratm1Ipc,Rargtm2Ipc/Rargtm2Ipc
Genetic Background: involves: 129S2/SvPas

 MP:0003446 renal hypoplasia "decreased cell number in the kidney leading to reduced size" [llw2:Linda Washburn , Mouse Genome Informatics Curator]
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Allelic Composition: Raratm2Ipc/Raratm2Ipc,Raratm1Ipc/Rara+,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas

Allelic Composition: Raratm1Ipc/Raratm1Ipc,Rargtm4Ipc/Rargtm4Ipc
Genetic Background: involves: 129/Sv * 129S2/SvPas

Allelic Composition: Raratm1Ipc/Raratm1Ipc,Rargtm2Ipc/Rargtm2Ipc
Genetic Background: involves: 129S2/SvPas

 MP:0003557 absent vas deferens "absence of the secretory duct of the testicle that carries spermatozoa, running from the epididymis, of which it is the continuation, to the prostatic urethra where it terminates to form ejaculatory duct" [ncbi:Matthew Mailman, NCBI request, Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8]
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Allelic Composition: Raratm1Ipc/Raratm1Ipc,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas

 MP:0003558 absent uterus "absence of the female muscular organ of gestation" [ncbi:Matthew Mailman, NCBI request]
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Allelic Composition: Raratm1Ipc/Raratm1Ipc,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas

 MP:0003604 single kidney 
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Allelic Composition: Taf4tm1Idvd/Taf4tm1Idvd,Tg(KRT14-cre/ERT2)1Ipc/0
Genetic Background: involves: C57BL/6 * SJL

 MP:0003639 abnormal response to vitamins "altered ability or inability to respond to or metabolize a group of organic substances that are required in trace amounts for the normal metabolic homeostasis of the body " [MeSH:National Library of Medicine - Medical Subject Headings , 2003]
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Allelic Composition: Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas

 MP:0003642 absent seminal gland "absence of the two folded, sac shaped, glands that is a diverticulum of the ductus deferens " [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8]
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Allelic Composition: Raratm1Ipc/Raratm1Ipc,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas

 MP:0003722 absent ureter "missing the tube that conducts the urine from the renal pelvis to the bladder" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: Raratm1Ipc/Raratm1Ipc,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas

 MP:0003869 ectopic cartilage "positional abnormality of cartilage" [smb:Susan M Bello, Mouse Genome Informatics Curator]
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Allelic Composition: Raratm1Ipc/Raratm1Ipc,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas

 MP:0004158 right aortic arch "the aortic arch lies to the right of the trachea and esophagus; results from persistance of the entire right dorsal arch and involution of a segment of the left arch" [monikat:Monika Tomczuk, Mouse Genome Informatics Curator]
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Allelic Composition: Raratm1Ipc/Raratm1Ipc,Rargtm4Ipc/Rargtm4Ipc
Genetic Background: involves: 129/Sv * 129S2/SvPas

Allelic Composition: Raratm1Ipc/Raratm1Ipc,Rargtm2Ipc/Rargtm2Ipc
Genetic Background: involves: 129S2/SvPas

 MP:0004550 short trachea "reduced length of the tube descending from the larynx and branching into the right and left main bronchi" [MGI:anna "Anna V. Anagnostopoulos, Mouse Genome Informatics Curator"]
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Allelic Composition: Raratm1Ipc/Raratm1Ipc,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas

 MP:0004552 fused tracheal cartilage rings "fusion of the 16-20 incomplete rings of hyaline cartilage that form the skeleton of the trachea" [MGI:anna "Anna V. Anagnostopoulos, Mouse Genome Informatics Curator"]
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Allelic Composition: Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas

Allelic Composition: Rargtm1Blt/Rargtm1Blt
Genetic Background: involves: 129P2/OlaHsd * C57BL/6J

 MP:0004553 absent tracheal cartilage rings "absence of the 16-20 incomplete rings of hyaline cartilage forming the skeleton of the trachea" [MGI:anna "Anna V. Anagnostopoulos, Mouse Genome Informatics Curator"]
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Allelic Composition: Raratm1Ipc/Raratm1Ipc,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas

Allelic Composition: Raratm2Ipc/Raratm2Ipc,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas

Allelic Composition: Raratm2Ipc/Raratm2Ipc,Raratm1Ipc/Rara+,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas

 MP:0004599 abnormal vertebral arch morphology "any structural anomaly of the dorsal part of a vertebra, consisting of a pair of pedicles, a pair of laminae, and seven processes (four articular processes, two transverse processes, and one spinous process)" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
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Allelic Composition: Rarbtm1Mma/Rarbtm1Mma,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas * C57BL/6

Allelic Composition: Cdx1tm1Pgr/Cdx1+,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129 * C57BL/6

Allelic Composition: Cdx1tm1Lhn/Cdx1+,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129 * C57BL/6

Allelic Composition: Cdx1tm1Lhn/Cdx1tm1Lhn,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129 * C57BL/6

Allelic Composition: Cdx1tm1Lhn/Cdx1tm1Lhn,Rargtm1Ipc/Rarg+
Genetic Background: involves: 129 * C57BL/6

 MP:0004601 abnormal vertebral spinous process "any structural anomaly of the dorsal projection of the vertebral arch that projects backward and downward from the junction of the laminae, and serves for the attachment of muscles and ligaments" [ISBN:0-683-40008-8 "Stedman s Medical Dictionary, 27th edition", MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
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Allelic Composition: Cdx1tm1Lhn/Cdx1tm1Pgr
Genetic Background: involves: 129 * C57BL/6

Allelic Composition: Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129 * C57BL/6

Allelic Composition: Cdx1tm1Pgr/Cdx1+,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129 * C57BL/6

Allelic Composition: Cdx1tm1Lhn/Cdx1tm1Lhn,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129 * C57BL/6

Allelic Composition: Cdx1tm1Lhn/Cdx1tm1Lhn,Rargtm1Ipc/Rarg+
Genetic Background: involves: 129 * C57BL/6

 MP:0004613 fusion of vertebral arches "improper union of the dorsal part of adjacent vertebra" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
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Allelic Composition: Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas

Allelic Composition: Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas * C57BL/6

Allelic Composition: Rarbtm1Mma/Rarbtm1Mma,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas * C57BL/6

Allelic Composition: Rarbtm1Mma/Rarb+,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas * C57BL/6

Allelic Composition: Cdx1tm1Pgr/Cdx1+,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129 * C57BL/6

Allelic Composition: Cdx1tm1Lhn/Cdx1+,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129 * C57BL/6

Allelic Composition: Cdx1tm1Lhn/Cdx1tm1Lhn,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129 * C57BL/6

Allelic Composition: Cdx1tm1Lhn/Cdx1tm1Lhn,Rargtm1Ipc/Rarg+
Genetic Background: involves: 129 * C57BL/6

 MP:0004615 cervical vertebral transformation "homeotic transformation of any cervical vertebrae to adopt the fate of another vertebrae" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
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Allelic Composition: Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas

Allelic Composition: Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas * C57BL/6

Allelic Composition: Rarbtm1Mma/Rarbtm1Mma,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas * C57BL/6

Allelic Composition: Rarbtm1Mma/Rarb+,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas * C57BL/6

Allelic Composition: Rargtm1Ipc/Rarg+
Genetic Background: involves: 129 * C57BL/6

Allelic Composition: Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129 * C57BL/6

Allelic Composition: Cdx1tm1Pgr/Cdx1+,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129 * C57BL/6

Allelic Composition: Cdx1tm1Lhn/Cdx1+,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129 * C57BL/6

Allelic Composition: Cdx1tm1Lhn/Cdx1tm1Lhn,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129 * C57BL/6

Allelic Composition: Cdx1tm1Lhn/Cdx1tm1Lhn,Rargtm1Ipc/Rarg+
Genetic Background: involves: 129 * C57BL/6

 MP:0004618 thoracic vertebral transformation "homeotic transformation of any thoracic vertebrae to adopt the fate of another vertebrae" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
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Allelic Composition: Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas

Allelic Composition: Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas * C57BL/6

Allelic Composition: Rarbtm1Mma/Rarbtm1Mma,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas * C57BL/6

Allelic Composition: Rarbtm1Mma/Rarb+,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas * C57BL/6

 MP:0004620 cervical vertebral fusion "the union of one or more cervical vertebrae into a single structure" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
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Allelic Composition: Raratm1Ipc/Raratm1Ipc,Rargtm4Ipc/Rargtm4Ipc
Genetic Background: involves: 129/Sv * 129S2/SvPas

Allelic Composition: Raratm1Ipc/Raratm1Ipc,Rargtm2Ipc/Rargtm2Ipc
Genetic Background: involves: 129S2/SvPas

 MP:0004658 abnormal ventral tubercle of atlas "any structural anomaly of the conical ventral projection on the arch of the atlas" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
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Allelic Composition: Cdx1tm1Lhn/Cdx1tm1Lhn,Rargtm1Ipc/Rarg+
Genetic Background: involves: 129 * C57BL/6

 MP:0004666 absent stapedial artery "absence of the small artery that passes through the ring of the stapes" [MGI:anna "Anna V. Anagnostopoulos, Mouse Genome Informatics Curator"]
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Allelic Composition: Raratm1Ipc/Raratm1Ipc,Rargtm2Ipc/Rargtm2Ipc
Genetic Background: involves: 129S2/SvPas

 MP:0005106 abnormal incus morphology "structural anomaly of the middle of the three auditory ossicles" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:83132]
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Allelic Composition: Raratm1Ipc/Raratm1Ipc,Rargtm4Ipc/Rargtm4Ipc
Genetic Background: involves: 129/Sv * 129S2/SvPas

Allelic Composition: Raratm1Ipc/Raratm1Ipc,Rargtm2Ipc/Rargtm2Ipc
Genetic Background: involves: 129S2/SvPas

 MP:0005193 abnormal anterior eye segment morphology "anomalous structure of any of the parts of the eye that lie in front of, or ventral to, the lens (inclusive) " [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
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Allelic Composition: Taf4tm1Idvd/Taf4tm1Idvd,Tg(KRT14-cre/ERT2)1Ipc/0
Genetic Background: involves: C57BL/6 * SJL

Allelic Composition: Rargtm2Ipc/Rargtm2Ipc,Rxratm2Ipc/Rxratm2Ipc
Genetic Background: involves: 129/Sv * 129S2/SvPas

 MP:0005205 abnormal eye anterior chamber "anomaly of the space in the eye, filled with aqueous humor, and bounded anteriorly by the cornea and a small portion of the sclera and posteriorly by a small portion of the ciliary body, the iris, and part of the crystalline lens" [MeSH:National Library of Medicine - Medical Subject Headings , 2003]
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Allelic Composition: Rarbtm1Mma/Rarbtm1Mma,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas * C57BL/6

 MP:0005208 abnormal iris stroma morphology "structural anomaly of the lamellated connective tissue of the iris" [MeSH:National Library of Medicine - Medical Subject Headings , 2003]
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Allelic Composition: Rarbtm1Mma/Rarbtm1Mma,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas * C57BL/6

 MP:0005248 abnormal Harderian gland morphology "structural anomaly of the sebaceous gland located behind the eyeball in the orbit that excretes fluid that facilitates movement of the third eyelid" [MeSH:National Library of Medicine - Medical Subject Headings , 2003]
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Allelic Composition: Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas

Allelic Composition: Rargtm1Blt/Rargtm1Blt
Genetic Background: involves: 129P2/OlaHsd * C57BL/6J

 MP:0005287 narrow eye opening "less than the normal distance from one eyelid to the other " [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator, J:71350]
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Allelic Composition: Raratm1Ipc/Raratm1Ipc
Genetic Background: involves: 129S2/SvPas * C57BL/6

Allelic Composition: Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas * C57BL/6

Allelic Composition: Rarbtm1Mma/Rarbtm1Mma,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas * C57BL/6

Allelic Composition: Rarbtm1Mma/Rarb+,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas * C57BL/6

 MP:0005300 abnormal corneal stroma morphology "structural anomaly of the lamellated connective tissue of the cornea" [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
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Allelic Composition: Rarbtm1Mma/Rarbtm1Mma,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas * C57BL/6

 MP:0005508 abnormal skeleton morphology "malformation of the bony framework of the body in vertebrates" [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
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Allelic Composition: Raratm1Ipc/Raratm1Ipc,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas

Allelic Composition: Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas * C57BL/6

Allelic Composition: Rarbtm1Mma/Rarbtm1Mma,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas * C57BL/6

Allelic Composition: Rarbtm1Mma/Rarb+,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas * C57BL/6

Allelic Composition: Rarbtm1Mma/Rarbtm1Mma,Rargtm1Ipc/Rarg+
Genetic Background: involves: 129S2/SvPas * C57BL/6

 MP:0006069 abnormal retinal neuronal layer morphology "malformation in any of the neuronal layers that make up the retina, including the ganglion cell, inner plexiform, inner nuclear, outer plexiform, outer nuclear layers, the inner and outer segments" [smb:Susan M Bello, Mouse Genome Informatics Curator, Gray s Anatomy:ISBN 0-914294-08-3]
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Allelic Composition: Rarbtm1Mma/Rarbtm1Mma,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas * C57BL/6

 MP:0006354 abnormal fourth branchial arch artery morphology "any structural anomaly of the vessels formed within the fourth pair of branchial arches in embryogenesis" [MGI:smb "Susan M. Bello, Mouse Genome Informatics Curator"]
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Allelic Composition: Raratm2Ipc/Raratm2Ipc,Raratm1Ipc/Rara+,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas

 MP:0006355 abnormal sixth branchial arch artery morphology "any structural anomaly of the vessels formed within the sixth pair of branchial arches in embryogenesis" [MGI:smb "Susan M. Bello, Mouse Genome Informatics Curator"]
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Allelic Composition: Raratm1Ipc/Raratm1Ipc,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas

 MP:0008514 absent retinal inner plexiform layer "absence of the retinal cell layer where bipolar and amacrine cell axons synapse with ganglion cell dendrites" [MGI:monikat "Monika Tomczuk, Mouse Genome Informatics Curator"]
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Allelic Composition: Rarbtm1Mma/Rarbtm1Mma,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas * C57BL/6

 MP:0008770 decreased survivor rate "a smaller percentage of organisms than expected survive to adulthood and have a lifespan similar to controls" [MGI:llw2 "Linda Washburn, Mouse Genome Informatics Curator"]
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Allelic Composition: Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas

 MP:0008823 abnormal ventricular membranous septum morphology "any structural anomaly of the membranous portion of the wall between the two lower chambers of the heart" [MGI:smb "Susan M. Bello, Mouse Genome Informatics Curator"]
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Allelic Composition: Raratm1Ipc/Raratm1Ipc,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas

Allelic Composition: Raratm2Ipc/Raratm2Ipc,Raratm1Ipc/Rara+,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas

 MP:0008874 decreased sensitivity to xenobiotics "increase in the dose or concentration of a foreign compound required to induce a specific level of response" [MGI:smb "Susan M. Bello, Mouse Genome Informatics Curator"]
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Allelic Composition: Rargtm1Blt/Rargtm1Blt
Genetic Background: involves: 129P2/OlaHsd * C57BL/6J

 MP:0008881 absent Harderian gland "absence of the sebaceous gland located behind the eyeball in the orbit that excretes fluid that facilitates movement of the third eyelid" [MESH:A13.445]
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Allelic Composition: Raratm1Ipc/Raratm1Ipc,Rargtm2Ipc/Rargtm2Ipc
Genetic Background: involves: 129S2/SvPas

Allelic Composition: Rarbtm1Mma/Rarbtm1Mma,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas * C57BL/6

Allelic Composition: Rarbtm1Mma/Rarb+,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas * C57BL/6

 MP:0008972 ethmoturbinate hypoplasia "underdevelopment or reduced size, usually due to a reduced number of cells, of the conchae of the ethmoid bone which occupy the caudal part of the nasal fossae and form the lateral and superior portions of the turbinate bones in mammals" [ISBN:0-683-40008-8 "Stedman s Medical Dictionary, 27th edition", MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
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Allelic Composition: Rarbtm1Mma/Rarbtm1Mma,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas * C57BL/6

 MP:0009072 absent cranial vagina "absence of the upper third of the female reproductive canal located between the uterus and the vulva, usually due to a developmental arrest or agenesis of the caudal Mullerian ducts" [MGI:anna "Anna V. Anagnostopoulos, Mouse Genome Informatics Curator"]
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Allelic Composition: Raratm1Ipc/Raratm1Ipc,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas

 MP:0009075 rudimentary Wolffian ducts "not fully developed or remnants of the transient embryonic drainage tubes of the embryonic kidney (mesonephric tubules) that empty into the cloaca and later develop into the ductus deferens in the male" [MGI:anna "Anna V. Anagnostopoulos, Mouse Genome Informatics Curator"]
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Allelic Composition: Raratm1Ipc/Raratm1Ipc,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas

 MP:0009076 rudimentary Mullerian ducts "not fully developed or remnants of the transient embryonic drainage tubes of the embryonic kidney (mesonephric tubules) that empty into the cloaca and in the female develop into the oviducts, uterus, and cranial vagina" [MGI:anna "Anna V. Anagnostopoulos, Mouse Genome Informatics Curator"]
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Allelic Composition: Raratm1Ipc/Raratm1Ipc,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas

 MP:0009438 fusion of cricoid and tracheal cartilages "union of the cricoid cartilage and one or more of the tracheal rings into one structure, when this fusion does not normally occur" [MGI:smb "Susan M. Bello, Mouse Genome Informatics Curator"]
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Allelic Composition: Raratm1Ipc/Raratm1Ipc,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas

Allelic Composition: Raratm2Ipc/Raratm2Ipc,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas

Allelic Composition: Raratm2Ipc/Raratm2Ipc,Raratm1Ipc/Rara+,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas

Allelic Composition: Rarbtm1Ipc/Rarbtm1Ipc,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas

Allelic Composition: Rarbtm1Mma/Rarbtm1Mma,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas * C57BL/6

 MP:0009608 abnormal lamellar body morphology "any structural anomaly of a membrane-bounded organelle, specialized for the storage and secretion various substances (surfactant phospholipids, glycoproteins and acid phosphates) which are arranged in the form of tightly packed, concentric, membrane sheets or lamellae" [GO:0042599]
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Allelic Composition: Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas

 MP:0010502 ventricle myocardium hypoplasia "underdevelopment or reduced size, usually due to a reduced number of cells, of the ventricular part of the heart myocardium" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
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Allelic Composition: Raratm1Ipc/Raratm1Ipc,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas

 MP:0010565 absent fetal ductus arteriosus "absence of the fetal vessel that connects the left pulmonary artery with the descending aorta" [ISBN:0-683-40008-8 "Stedman s Medical Dictionary, 27th edition"]
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Allelic Composition: Raratm1Ipc/Raratm1Ipc,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas

 MP:0010572 persistent right dorsal aorta "persistence of the right dorsal aorta after development; the right dorsal aorta normally regresses but when it persists, a double aortic arch develops; if the left dorsal aorta also regresses, a right aortic arch forms" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
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Allelic Composition: Raratm1Ipc/Raratm1Ipc,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas

Allelic Composition: Raratm2Ipc/Raratm2Ipc,Raratm1Ipc/Rara+,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas

 MP:0010701 fusion of atlas and odontoid process "the large protuberance that projects upward from the cervical axis (C2), around which the cervical atlas normally rotates, is instead fused to elements of the atlas; the odontoid process may or may not remain attached to the axis" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
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Allelic Composition: Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas * C57BL/6

Allelic Composition: Rarbtm1Mma/Rarbtm1Mma,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas * C57BL/6

Allelic Composition: Rarbtm1Mma/Rarb+,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas * C57BL/6

Allelic Composition: Rarbtm1Mma/Rarbtm1Mma,Rargtm1Ipc/Rarg+
Genetic Background: involves: 129S2/SvPas * C57BL/6

 MP:0010702 split cervical atlas 
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Allelic Composition: Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas * C57BL/6

 MP:0010703 split cervical axis 
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Allelic Composition: Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas * C57BL/6

Allelic Composition: Rarbtm1Mma/Rarbtm1Mma,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas * C57BL/6

Allelic Composition: Rarbtm1Mma/Rarb+,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas * C57BL/6

Allelic Composition: Rarbtm1Mma/Rarbtm1Mma,Rargtm1Ipc/Rarg+
Genetic Background: involves: 129S2/SvPas * C57BL/6

 MP:0010705 absent metoptic pilar "absence of the posterior border of the optic nerve foramen" [PMID:11493527]
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Allelic Composition: Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas * C57BL/6

Allelic Composition: Rarbtm1Mma/Rarbtm1Mma,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas * C57BL/6

Allelic Composition: Rarbtm1Mma/Rarb+,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas * C57BL/6

Allelic Composition: Rarbtm1Mma/Rarb+,Rargtm1Ipc/Rarg+
Genetic Background: involves: 129S2/SvPas * C57BL/6

 MP:0010706 ventral rotation of lens "a circular shift toward the ventral pole in the position of the equator of the lens relative to the optic nerve exit point" [PMID:7923367]
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Allelic Composition: Aldh1a1tm1.1Ngb/Aldh1a1tm1.1Ngb,Aldh1a3tm1.1Pcn/Aldh1a3tm1.1Pcn
Genetic Background: involves: 129/Sv * C57BL/6 * SJL

Allelic Composition: Rarbtm1Mma/Rarbtm1Mma,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas * C57BL/6

 MP:0010707 decreased ventral retina size "decreasd size of the ventral portion of the retina" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator", PMID:7923367]
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Allelic Composition: Aldh1a1tm1.1Ngb/Aldh1a1tm1.1Ngb,Aldh1a3tm1.1Pcn/Aldh1a3tm1.1Pcn
Genetic Background: involves: 129/Sv * C57BL/6 * SJL

 MP:0010710 absent sclera "absence of the fibrous, outer envelope of the eyeball, covering it entirely excepting the segment covered anteriorly by the cornea" [MESH:A09.371.784]
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Allelic Composition: Rarbtm1Mma/Rarbtm1Mma,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas * C57BL/6

 MP:0010711 persistent hyperplastic primary vitreous "persistence of the embryonic fibrovascular mesodermal tissue located between the optic cup and lens vesicle that normally regresses during the development of the vitreous body" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
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Allelic Composition: Aldh1a1tm1.1Ngb/Aldh1a1tm1.1Ngb,Aldh1a3tm1.1Pcn/Aldh1a3tm1.1Pcn
Genetic Background: involves: 129/Sv * C57BL/6 * SJL

Allelic Composition: Rarbtm1Mma/Rarbtm1Mma,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas * C57BL/6

Allelic Composition: Rarbtm1Mma/Rarb+,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas * C57BL/6

Allelic Composition: Rarbtm1Mma/Rarb+,Rargtm1Ipc/Rarg+
Genetic Background: involves: 129S2/SvPas * C57BL/6

Allelic Composition: Rarbtm1Mma/Rarbtm1Mma,Rargtm1Ipc/Rarg+
Genetic Background: involves: 129S2/SvPas * C57BL/6

 MP:0010712 absent nasolacrimal duct "absence of the paired channels leading from the lacrimal sacs to the inferior meatus of the nose, through which tears are conducted through the nasal cavity" [ISBN:0-683-40008-8 "Stedman s Medical Dictionary, 27th edition"]
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Allelic Composition: Rarbtm1Mma/Rarbtm1Mma,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas * C57BL/6

 MP:0010714 coloboma of the iris "congenital defect of the iris in which some part of the structure is absent" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
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Allelic Composition: Rarbtm1Mma/Rarbtm1Mma,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas * C57BL/6

 MP:0010716 coloboma of the optic disc "congenital defect of the optic disc in which some part of the structure is absent" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
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Allelic Composition: Rarbtm1Mma/Rarbtm1Mma,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas * C57BL/6

 MP:0010721 short sublingual duct "decreased length of the canals that drain the sublingual gland" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
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Allelic Composition: Rarbtm1Mma/Rarbtm1Mma,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas * C57BL/6

 MP:0010722 persistent cervical thymus "the solid lobe of the thymus fails to descend to the mediastinum" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
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Allelic Composition: Raratm1Ipc/Raratm1Ipc,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas

 MP:0010728 fusion of atlas and occipital bones "union of elements of the atlas and the bone at the lower, posterior part of the skull into one structure" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
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Allelic Composition: Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas

Allelic Composition: Hoxd4tm1Bhr/Hoxd4tm1Bhr,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas * 129S7/SvEvBrd * CD-1

Allelic Composition: Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas * C57BL/6

Allelic Composition: Rarbtm1Mma/Rarbtm1Mma,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas * C57BL/6

Allelic Composition: Rarbtm1Mma/Rarb+,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas * C57BL/6

 MP:0010978 absent ureteric bud "absence of the epithelial swelling on the Wolffian duct that elongates to invade the adjacent metanephric mesenchyme" [PMID:19828308]
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Allelic Composition: Raratm1Ipc/Raratm1Ipc,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas

 MP:0010983 abnormal ureteric bud invasion "any anomaly in the process in which the ureteric bud grows into the metanephric mesenchyme, and contributes to the formation of the metanephros" [PMID:19828308]
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Allelic Composition: Raratm1Ipc/Raratm1Ipc,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas

 MP:0010984 abnormal metanephric mesenchyme morphology "any structural anomaly of the embryonic connective tissue made up of loosely aggregated mesenchymal cells, supported by interlaminar jelly, in the developing metanephros; interactions between the ureteric bud and the metanephric mesenchyme leads to the initiation of outgrowth and repetitive branching of the UB that ultimately generates the definitive renal collecting system and induces formation of renal vesicles from the mesenchyme tissue" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator", PMID:19828308]
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Allelic Composition: Raratm1Ipc/Raratm1Ipc,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas

 MP:0010989 fused bronchial cartilage rings "fusion of the hyaline cartilaginous structures that support the bronchi" [MGI:anna "Anna V. Anagnostopoulos, Mouse Genome Informatics Curator"]
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Allelic Composition: Raratm1Ipc/Raratm1Ipc,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas

Allelic Composition: Raratm2Ipc/Raratm2Ipc,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas

Allelic Composition: Raratm2Ipc/Raratm2Ipc,Raratm1Ipc/Rara+,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas

Allelic Composition: Rarbtm1Ipc/Rarbtm1Ipc,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas

 MP:0011089 complete perinatal lethality "death of all organisms of a given genotype in a population within the perinatal period (Mus: E18.5 through postnatal day 1)" [MGI:csmith]
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Allelic Composition: Rarbtm1Mma/Rarbtm1Mma,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas * C57BL/6

 MP:0011090 partial perinatal lethality "the appearance of lower than Mendelian ratios of organisms of a given genotype due to death of some, but not all of the organisms within the perinatal period (Mus: E18.5 through postnatal day 1)" [MGI:csmith]
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Allelic Composition: Raratm1Ipc/Raratm1Ipc,Rargtm2Ipc/Rargtm2Ipc
Genetic Background: involves: 129S2/SvPas

 MP:0011091 complete prenatal lethality "death of all organisms of a given genotype in a population between fertilization and birth (Mus: approximately E18.5)" [MGI:csmith]
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Allelic Composition: Raratm1Ipc/Raratm1Ipc,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas

 MP:0011306 absent kidney pelvis "absence of the funnel shaped proximal portion of the ureter, normally formed by convergence of the major calices" [MGI:anna]
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Allelic Composition: Raratm1Ipc/Raratm1Ipc,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas

 MP:0011486 ectopic ureter "an abnormally placed opening of the ureter, either into the urinary bladder or at another site in the lower urinary or genital tract" [MGI:anna]
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Allelic Composition: Rarbtm1Mma/Rarbtm1Mma,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas * C57BL/6

 MP:0013233 ectopic thyroid gland "a thyroid gland located outside of its normal position anterior to the laryngeal cartilages; usually due to abnormal migration of the thyroid diverticulum down from the foramen cecum at the posterior aspect of the tongue to its permanent pre-tracheal location; ectopic thyroid tissue is frequently found along the course of the thyroglossal duct or laterally in the neck, as well as in distant places such as the mediastinum and the subdiaphragmatic organs; the most common ectopic location is near its embryological origin at the foramen caecum, resulting in a lingual thyroid" [MGI:anna]
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Allelic Composition: Raratm1Ipc/Raratm1Ipc,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas

 MP:0013319 seminal vesicle atrophy "acquired size diminution of the seminal vesicles, associated with wasting as from death and reabsorbtion of cells, diminished cellular proliferation, decreased cellular volume, pressure, ischemia, malnutrition, reduced function or malfunction, or hormonal changes" [MGI:Anna]
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Allelic Composition: Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas

 MP:0013321 squamous metaplasia of seminal vesicles "a benign non-cancerous transformation of the pseudostratified columnar epithelium lining the seminal vesicle(s) into stratified squamous epithelium; may occur in response to irritation or inflammation and involve keratinization" [MGI:Anna]
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Allelic Composition: Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas

Allelic Composition: Rargtm3.1Ipc/Rargtm3.1Ipc
Genetic Background: involves: C57BL/6 * SJL

Allelic Composition: Rargtm1Blt/Rargtm1Blt
Genetic Background: involves: 129P2/OlaHsd * C57BL/6J

 MP:0013322 squamous metaplasia of prostate gland "a benign non-cancerous transformation of the prostatic glandular epithelium into stratified squamous epithelium" [MGI:Anna]
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Allelic Composition: Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas

Allelic Composition: Rargtm3.1Ipc/Rargtm3.1Ipc
Genetic Background: involves: C57BL/6 * SJL

Allelic Composition: Rargtm1Blt/Rargtm1Blt
Genetic Background: involves: 129P2/OlaHsd * C57BL/6J

 MP:0013574 ectopic parathyroid gland "a parathyroid gland located outside of its normal position; in the normal adult mouse, the parathyroids are usually found embedded in the connective tissue capsule on the posterior surface of the thyroid gland; because of their common pharyngeal pouch origin, ectopic thyroid and parathyroid tissue can occasionally be found in the thymus" [MGI:Anna]
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Allelic Composition: Raratm1Ipc/Raratm1Ipc,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas

Allelic Composition: Raratm2Ipc/Raratm2Ipc,Raratm1Ipc/Rara+,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas

 MP:0013744 abnormal conjunctival sac morphology "any structural anomaly of the space bound by the conjunctival membrane between the palpebral and bulbar conjunctiva, into which the lacrimal fluid is secreted; it is a closed space when eye is closed; when eye is open, the sac is open anteriorly through the palpebral fissure (between the eyelids)" [http://www.medilexicon.com/medicaldictionary.php?t=79277, MGI:Anna]
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Allelic Composition: Rarbtm2Ipc/Rarbtm2Ipc,Rargtm3Ipc/Rargtm3Ipc,H2afvTg(Wnt1-cre)11Rth/?
Genetic Background: involves: 129/Sv * C57BL/6 * SJL

Allelic Composition: Rarbtm1Mma/Rarbtm1Mma,Rargtm1Ipc/Rargtm1Ipc
Genetic Background: involves: 129S2/SvPas * C57BL/6

 MP:0030326 decreased periocular mesenchyme apoptosis "reduction in the number of cells of the periocular mesenchyme undergoing programmed cell death" [MGI:anna]
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Allelic Composition: Rarbtm2Ipc/Rarbtm2Ipc,Rargtm3Ipc/Rargtm3Ipc,H2afvTg(Wnt1-cre)11Rth/?
Genetic Background: involves: 129/Sv * C57BL/6 * SJL

 MP:0030416 absent temporal bone zygomatic process "missing the long, arched process that projects from the lower region of the squamous part of the temporal bone and articulates with the zygomatic bone" [MGI:anna]
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Allelic Composition: Raratm1Ipc/Raratm1Ipc,Rargtm4Ipc/Rargtm4Ipc
Genetic Background: involves: 129/Sv * 129S2/SvPas

Allelic Composition: Raratm1Ipc/Raratm1Ipc,Rargtm2Ipc/Rargtm2Ipc
Genetic Background: involves: 129S2/SvPas

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSMUSG00000015843 Rxrg / P28705 / Retinoic acid receptor RXR-gamma / P48443* / retinoid X receptor gamma*  / complex
 ENSMUSG00000004885 Crabp2 / P22935 / Cellular retinoic acid-binding protein 2 / P29373*  / complex / reaction
 ENSMUSG00000015846 Rxra / P28700 / retinoid X receptor alpha / P19793*  / complex






 

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