Manteia

ENSMUSG00000022634

Mus musculus

Features

Gene ID:	ENSMUSG00000022634

Biological name :	Yaf2

Synonyms :	Q99LW6 / Yaf2 / YY1 associated factor 2

Possible biological names infered from orthology :	Q8IY57

Species:	Mus musculus

Chr. number:	15
Strand:	-1
Band:	E3
Gene start:	93284278
Gene end:	93336935

Corresponding Affymetrix probe sets:	10431726 (MoGene1.0st) 1423399_a_at (Mouse Genome 430 2.0 Array) 1429839_a_at (Mouse Genome 430 2.0 Array)

Cross references:	Ensembl peptide - ENSMUSP00000079179 Ensembl peptide - ENSMUSP00000155669 NCBI entrez gene - 67057 See in Manteia. MGI - MGI:1914307 RefSeq - XM_006521292 RefSeq - NM_024189 RefSeq Peptide - NP_077151 swissprot - Q99LW6 Ensembl - ENSMUSG00000022634

See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed

Ortholog prediction (from Ensembl)

Paralog prediction (from Ensembl)

Paralog name	ID	Similarity(%)
Rybp / Q8CCI5 / RING1 and YY1-binding protein / Q8N488*	ENSMUSG00000072872	65

Protein motifs (from Interpro)

Interpro ID	Name
IPR001876	Zinc finger, RanBP2-type
IPR033774	Yaf2/RYBP C-terminal binding motif
IPR036443	Zinc finger, RanBP2-type superfamily

Gene Ontology (GO)

Type	GO ID	Term	Ev.Code
biological_process	GO:0006351	transcription, DNA-templated	IEA
biological_process	GO:0006355	regulation of transcription, DNA-templated	IEA
biological_process	GO:0045892	negative regulation of transcription, DNA-templated	IEA
biological_process	GO:0045893	positive regulation of transcription, DNA-templated	IEA
cellular_component	GO:0005634	nucleus	ISS
cellular_component	GO:0005654	nucleoplasm	IEA
cellular_component	GO:0005829	cytosol	IEA
molecular_function	GO:0003713	transcription coactivator activity	ISS
molecular_function	GO:0003714	transcription corepressor activity	ISS
molecular_function	GO:0005515	protein binding	IPI
molecular_function	GO:0046872	metal ion binding	IEA

Pathways (from Reactome)

Pathway description

Phenotype (from MGI, Zfin or HPO)

Phenotype

Definition

Genetic BG

No match

Interacting proteins (from Reactome)

Interactor ID	Name	Interaction type
ENSMUSG00000025050	Pcgf6 / Q99NA9 / Polycomb group RING finger protein 6 / Q9BYE7* / polycomb group ring finger 6*	/ complex
ENSMUSG00000022394	P59178 / L3mbtl2 / Lethal(3)malignant brain tumor-like protein 2 / Q969R5* / L3MBTL2, polycomb repressive complex 1 subunit*	/ complex
ENSMUSG00000029836	Cbx3 / chromobox protein homolog 3 / Q13185* / chromobox 3*	/ complex / reaction
ENSMUSG00000013787	Ehmt2 / Q9Z148 / Histone-lysine N-methyltransferase EHMT2 / Q96KQ7* / euchromatic histone lysine methyltransferase 2*	/ complex / reaction
ENSMUSG00000024325	Ring1 / O35730 / E3 ubiquitin-protein ligase RING1 / Q06587* / ring finger protein 1*	/ complex
ENSMUSG00000036893	Ehmt1 / Q5DW34 / Histone-lysine N-methyltransferase EHMT1 / Q9H9B1* / euchromatic histone lysine methyltransferase 1*	/ complex / reaction
ENSMUSG00000057469	E2f6 / O54917 / Transcription factor E2F6 / O75461* / E2F transcription factor 6*	/ reaction / complex
ENSMUSG00000038482	Tfdp1 / Q08639 / transcription factor Dp 1 / TFDP3* / Q14186* / Q5H9I0* / transcription factor Dp family member 3*	/ reaction / complex
ENSMUSG00000059436	Max / Max protein / P61244* / MYC associated factor X*	/ complex / reaction
ENSMUSG00000026484	Rnf2 / Q9CQJ4 / E3 ubiquitin-protein ligase RING2 / Q99496* / ring finger protein 2*	/ complex
ENSMUSG00000033943	Mga / A2AWL7 / MAX-associated protein / Q8IWI9* / MGA, MAX dimerization protein*	/ complex / reaction

1 s.

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		© Olivier Tassy / Olivier Pourquie 2007-2024 contact: otassy@igbmc.fr