ENSMUSG00000047281


Mus musculus

Features
Gene ID: ENSMUSG00000047281
  
Biological name :Sfn
  
Synonyms : O70456 / Sfn / stratifin
  
Possible biological names infered from orthology : P31947
  
Species: Mus musculus
  
Chr. number: 4
Strand: -1
Band: D2.3
Gene start: 133600556
Gene end: 133602168
  
Corresponding Affymetrix probe sets: 10517067 (MoGene1.0st)   10572635 (MoGene1.0st)   1448612_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000050374
NCBI entrez gene - 55948     See in Manteia.
MGI - MGI:1891831
RefSeq - NM_018754
RefSeq Peptide - NP_061224
swissprot - O70456
Ensembl - ENSMUSG00000047281
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ywhaqaENSDARG00000042539Danio rerio
 ywhaqbENSDARG00000023323Danio rerio
 SFNENSGALG00000028115Gallus gallus
 SFNENSG00000175793Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Ywhaq / P68254 / tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein thetaENSMUSG0000007643271
Ywhaz / P63101 / tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptideENSMUSG0000002228570
Ywhab / Q9CQV8 / tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide / P31946* / tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein beta*ENSMUSG0000001832666
Ywhah / P68510 / tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide / Q04917* / tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein eta*ENSMUSG0000001896563
Ywhag / P61982 / tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide / P61981* / tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein gamma*ENSMUSG0000005139163
Ywhae / P62259 / tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide / P62258* / tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation prote...ENSMUSG0000002084960


Protein motifs (from Interpro)
Interpro ID Name
 IPR000308  14-3-3 protein
 IPR023409  14-3-3 protein, conserved site
 IPR023410  14-3-3 domain
 IPR036815  14-3-3 domain superfamily
 IPR037435  14-3-3 protein sigma


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IDA
 biological_processGO:0001836 release of cytochrome c from mitochondria IEA
 biological_processGO:0003334 keratinocyte development IGI
 biological_processGO:0008630 intrinsic apoptotic signaling pathway in response to DNA damage IEA
 biological_processGO:0010482 regulation of epidermal cell division IMP
 biological_processGO:0010839 negative regulation of keratinocyte proliferation IGI
 biological_processGO:0030216 keratinocyte differentiation IMP
 biological_processGO:0030307 positive regulation of cell growth IDA
 biological_processGO:0031424 keratinization IMP
 biological_processGO:0043154 negative regulation of cysteine-type endopeptidase activity involved in apoptotic process IEA
 biological_processGO:0043588 skin development IMP
 biological_processGO:0045606 positive regulation of epidermal cell differentiation IMP
 biological_processGO:0046827 positive regulation of protein export from nucleus IDA
 biological_processGO:0051726 regulation of cell cycle IDA
 biological_processGO:0061436 establishment of skin barrier IMP
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0030659 cytoplasmic vesicle membrane TAS
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0019901 protein kinase binding IDA
 molecular_functionGO:0019904 protein domain specific binding IEA
 molecular_functionGO:0042802 identical protein binding IEA
 molecular_functionGO:0045296 cadherin binding IEA
 molecular_functionGO:0051219 phosphoprotein binding IPI


Pathways (from Reactome)
Pathway description
Activation of BAD and translocation to mitochondria
Translocation of SLC2A4 (GLUT4) to the plasma membrane
RHO GTPases activate PKNs
TP53 Regulates Metabolic Genes
TP53 Regulates Transcription of Genes Involved in G2 Cell Cycle Arrest
Chk1/Chk2(Cds1) mediated inactivation of Cyclin B:Cdk1 complex


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0000018 small ears "outer ears of a smaller than normal size" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
Show

Allelic Composition: Tectatm2Gpr/Tecta+
Genetic Background: involves: 129S/SvEv * C57BL/6J

 MP:0000111 cleft palate "congenital fissure of the tissues normally uniting to form the palate" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:49840]
Show

Allelic Composition: Fbxo11Jf/Fbxo11Mutt
Genetic Background: involves: BALB/c * C3H/HeN

Allelic Composition: Kdf1shd/Kdf1+,SfnEr/Sfn+
Genetic Background: involves: C3HeB/FeJ * C57BL/6J

 MP:0000160 kyphosis "forward curvature of the spine, characterized by extensive flexion. " [J:62023, J:66943, Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8, cml:Cathleen M. Lutz , Mouse Genome Informatics Curator]
Show

Allelic Composition: Tectatm2Gpr/Tecta+
Genetic Background: involves: 129S/SvEv * C57BL/6J

 MP:0000351 increased cell proliferation "greater than the normal growth and reproduction of similar cells" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
Show

Allelic Composition: Galctwi/Galctwi,Il6tm1Kopf/Il6tm1Kopf
Genetic Background: involves: 129S2/SvPas * C57BL/6J * CE/J

 MP:0000379 reduced hair follicle number "fewer number of the epidermal invaginations from which the hair shaft develops" [J:15108]
Show

Allelic Composition: Tectatm2Gpr/Tecta+
Genetic Background: involves: 129S/SvEv * C57BL/6J

 MP:0000384 distorted hair follicle pattern "twisted or contorted configuration of the arrangement of hair follicles in the skin" [J:56777]
Show

Allelic Composition: SfnEr/SfnEr
Genetic Background: involves: C57BL/6By

 MP:0000416 sparse fur "fur that is significantly less dense" [J:46854]
Show

Allelic Composition: Tectatm2Gpr/Tecta+
Genetic Background: involves: 129S/SvEv * C57BL/6J

 MP:0000432 abnormal head morphology "anomalous structure or development of the portion of the body containing the brain and organs of sight, hearing, taste, and smell " [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
Show

Allelic Composition: Tectatm2Gpr/Tecta+
Genetic Background: involves: 129S/SvEv * C57BL/6J

 MP:0000433 microcephaly "an abnormally small head" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8, csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Tectatm2Gpr/Tecta+
Genetic Background: involves: 129S/SvEv * C57BL/6J

 MP:0000445 short snout "reduced length of the anterior facial part of the muzzle" [J:53370]
Show

Allelic Composition: Tectatm2Gpr/Tecta+
Genetic Background: involves: 129S/SvEv * C57BL/6J

 MP:0000447 flattened snout 
Show

Allelic Composition: Tectatm2Gpr/Tecta+
Genetic Background: involves: 129S/SvEv * C57BL/6J

 MP:0000452 abnormal mouth morphology "anomalous structure or development of the oral cavity" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
Show

Allelic Composition: Irf6tm1Mjd/Irf6+,SfnEr/Sfn+
Genetic Background: involves: 129S1/Sv * 129X1/SvJ * C57BL/6

 MP:0000454 abnormal jaw morphology "malformation of the bony framework of the mouth where the teeth are held" [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
Show

Allelic Composition: Tectatm2Gpr/Tecta+
Genetic Background: involves: 129S/SvEv * C57BL/6J

 MP:0000458 abnormal mandible morphology "malformation of the lower bony framework of the mouth where the inferior teeth are held" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8]
Show

Allelic Composition: Tectatm2Gpr/Tecta+
Genetic Background: involves: 129S/SvEv * C57BL/6J

 MP:0000547 short limbs "reduced average length of the extremities" [MGI:CLS, J:61509]
Show

Allelic Composition: Tectatm2Gpr/Tecta+
Genetic Background: involves: 129S/SvEv * C57BL/6J

Allelic Composition: SfnEr/SfnEr
Genetic Background: B6CBACa Aw-J/A-SfnEr/J

 MP:0000552 abnormal radius morphology "malformation of the short bone of the lateral forearm" [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
Show

Allelic Composition: Tectatm2Gpr/Tecta+
Genetic Background: involves: 129S/SvEv * C57BL/6J

 MP:0000564 syndactyly "any degree of webbing or fusion of the digits, may involve only soft tissues or also can include bone" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8]
Show

Allelic Composition: Irf6tm1Mjd/Irf6+,SfnEr/Sfn+
Genetic Background: involves: 129S1/Sv * 129X1/SvJ * C57BL/6

Allelic Composition: SfnEr/SfnEr
Genetic Background: involves: C57BL/6By

 MP:0000585 kinked tail "a sharp bend or zig-zag in the tail" [J:61295]
Show

Allelic Composition: Irf6tm1Mjd/Irf6+,SfnEr/Sfn+
Genetic Background: involves: 129S1/Sv * 129X1/SvJ * C57BL/6

Allelic Composition: SfnEr/SfnEr
Genetic Background: involves: C57BL/6By

 MP:0000592 short tail "reduced length of tail compared to control " [J:55583]
Show

Allelic Composition: SfnEr/SfnEr
Genetic Background: B6CBACa Aw-J/A-SfnEr/J

Allelic Composition: SfnEr/SfnEr
Genetic Background: involves: C57BL/6By

 MP:0000598 abnormal liver morphology "malformation or absence of this bile-secreting exocrine gland, which is important for detoxification; for fat, carbohydrate, and protein metabolism; and for glycogen storage " [Stedman s Medical Dictionary:ISBN 0-683-40008-8, MGI:CLS, J:23170]
Show

Allelic Composition: Tectatm2Gpr/Tecta+
Genetic Background: involves: 129S/SvEv * C57BL/6J

 MP:0000689 abnormal spleen morphology "atypical structure of the organ that functions to filter blood and to store red corpuscles and platelets" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:27463]
Show

Allelic Composition: Fasltm1.1Cgm/Fasltm1.1Cgm
Genetic Background: involves: 129S2/SvPas * C57BL/6 * C57BL/6N

 MP:0000762 abnormal tongue morphology "anomalous structure or development of the mobile mass of muscular tissue and surrounding epithelial tissue occupying the cavity of the mouth and forming part of the floor" [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
Show

Allelic Composition: Tectatm2Gpr/Tecta+
Genetic Background: involves: 129S/SvEv * C57BL/6J

 MP:0001196 shiny skin "skin with a glossy or glistening appearance" [J:56641]
Show

Allelic Composition: Tectatm2Gpr/Tecta+
Genetic Background: involves: 129S/SvEv * C57BL/6J

Allelic Composition: SfnEr/SfnEr
Genetic Background: B6CBACa Aw-J/A-SfnEr/J

 MP:0001199 thin skin "reduced thickness of the outer protective layer of the body" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:49471]
Show

Allelic Composition: Tectatm2Gpr/Tecta+
Genetic Background: involves: 129S/SvEv * C57BL/6J

 MP:0001216 abnormal epidermal layer morphology "anomalous structure or development of the superficial epithelial portion of the skin" [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
Show

Allelic Composition: Tectatm2Gpr/Tecta+
Genetic Background: involves: 129S/SvEv * C57BL/6J

Allelic Composition: Irf6tm1Mjd/Irf6+,SfnEr/Sfn+
Genetic Background: involves: 129S1/Sv * 129X1/SvJ * C57BL/6

Allelic Composition: SfnEr/SfnEr
Genetic Background: involves: C57BL/6By

 MP:0001218 thin epidermis "reduced thickness of the superficial epithelial portion of the skin" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:61790]
Show

Allelic Composition: SfnEr/SfnEr
Genetic Background: involves: C57BL/6By

 MP:0001219 thickened epidermis "increase in the width of the epidermal cell layer in the skin" [J:65146]
Show

Allelic Composition: Irf6tm1Mjd/Irf6+,SfnEr/Sfn+
Genetic Background: involves: 129S1/Sv * 129X1/SvJ * C57BL/6

Allelic Composition: SfnEr/SfnEr
Genetic Background: B6CBACa Aw-J/A-SfnEr/J

Allelic Composition: SfnEr/SfnEr
Genetic Background: involves: C57BL/6By

Allelic Composition: Kdf1shd/Kdf1+,SfnEr/Sfn+
Genetic Background: involves: C3HeB/FeJ * C57BL/6J

 MP:0001222 epidermal hyperplasia "increase in size of the epidermis due to increase in epidermal cell number" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:65146]
Show

Allelic Composition: SfnEr/SfnEr
Genetic Background: B6CBACa Aw-J/A-SfnEr/J

 MP:0001231 abnormal basal cell layer morphology "structural anomaly of the deepest layer of the epidermis, which is composed of dividing stem cells and anchoring cells" [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
Show

Allelic Composition: Tectatm2Gpr/Tecta+
Genetic Background: involves: 129S/SvEv * C57BL/6J

Allelic Composition: SfnEr/SfnEr
Genetic Background: involves: C57BL/6By

 MP:0001233 abnormal suprabasal layer morphology "malformed or atypical condition of the suprabasal layer of the skin" [J:56777]
Show

Allelic Composition: Irf6tm1Mjd/Irf6+,SfnEr/Sfn+
Genetic Background: involves: 129S1/Sv * 129X1/SvJ * C57BL/6

 MP:0001236 abnormal spinous layer morphology "structual or developmental anomaly of the layer of polyhedral cells in the epidermis; shrinkage and adhesion of these cells gives a spiny or prickly appearance" [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
Show

Allelic Composition: SfnEr/SfnEr
Genetic Background: involves: C57BL/6By

 MP:0001239 abnormal granular layer morphology "structural or developmental anomaly of the layer of flattened cells containing basophilic granules of keratohyalin and lying just above the stratum spinosum (spiny layer) of the epidermis" [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
Show

Allelic Composition: Tectatm2Gpr/Tecta+
Genetic Background: involves: 129S/SvEv * C57BL/6J

 MP:0001240 abnormal cornified layer morphology "structural or developmental anomaly of the outer layer of the epidermis, consisting of several layers of flat keratinized non-nucleated cells" [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
Show

Allelic Composition: Tectatm2Gpr/Tecta+
Genetic Background: involves: 129S/SvEv * C57BL/6J

Allelic Composition: Kdf1shd/Kdf1+,SfnEr/Sfn+
Genetic Background: involves: C3HeB/FeJ * C57BL/6J

 MP:0001241 absent cornified layer "missing the outer layer of the epidermis, composed of several layers of keratinized non-nucleated cells" [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
Show

Allelic Composition: Irf6tm1Mjd/Irf6+,SfnEr/Sfn+
Genetic Background: involves: 129S1/Sv * 129X1/SvJ * C57BL/6

Allelic Composition: SfnEr/SfnEr
Genetic Background: B6CBACa Aw-J/A-SfnEr/J

 MP:0001297 microphthalmia "reduced average size of the eyes" [J:18048]
Show

Allelic Composition: Tectatm2Gpr/Tecta+
Genetic Background: involves: 129S/SvEv * C57BL/6J

Allelic Composition: SfnEr/SfnEr
Genetic Background: involves: C57BL/6By

 MP:0001340 abnormal eyelid morphology "malformation of the skin folds covering the front of the eyeball" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: SfnEr/SfnEr
Genetic Background: involves: C57BL/6By

 MP:0001539 decreased number of caudal vertebrae "reduced number of the bony segments of the tail" [Stedman s Medical Dictionary, 27th edition:ISBN 0-683-40008-8]
Show

Allelic Composition: Tectatm2Gpr/Tecta+
Genetic Background: involves: 129S/SvEv * C57BL/6J

 MP:0001676 abnormal apical ectodermal ridge "malformation of the multilayered ectodermal region at the tip of a limb bud necessary for the proper development of the underlying mesenchyme" [MGI:tc]
Show

Allelic Composition: SfnEr/SfnEr
Genetic Background: involves: C57BL/6By

 MP:0001732 postnatal growth retardation "slow or limited development after birth " [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
Show

Allelic Composition: Tectatm2Gpr/Tecta+
Genetic Background: involves: 129S/SvEv * C57BL/6J

 MP:0001805 decreased IgG "less than normal immunoglobulin class G level" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
Show

Allelic Composition: Fasltm1.1Cgm/Fasltm1.1Cgm
Genetic Background: involves: 129S2/SvPas * C57BL/6 * C57BL/6N

 MP:0001806 decreased IgM "less than normal immunoglobulin class M level" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
Show

Allelic Composition: Fasltm1.1Cgm/Fasltm1.1Cgm
Genetic Background: involves: 129S2/SvPas * C57BL/6 * C57BL/6N

 MP:0001953 respiratory failure "cessation of or failure to commence breathing" [MGI:cls, J:60159]
Show

Allelic Composition: Tectatm2Gpr/Tecta+
Genetic Background: involves: 129S/SvEv * C57BL/6J

 MP:0001954 respiratory distress "physical difficulty or inability to breathe" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:54931]
Show

Allelic Composition: Tectatm2Gpr/Tecta+
Genetic Background: involves: 129S/SvEv * C57BL/6J

Allelic Composition: SfnEr/SfnEr
Genetic Background: B6CBACa Aw-J/A-SfnEr/J

 MP:0002051 skin papilloma "a circumscribed, benign epithelial tumor projecting from the surrounding surface" [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
Show

Allelic Composition: Tectatm2Gpr/Tecta+
Genetic Background: involves: 129S/SvEv * C57BL/6J

 MP:0002060 abnormal skin morphology "malformation or atypical structure of the membranous protective covering of the body" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8, J:56777]
Show

Allelic Composition: Irf6tm1Mjd/Irf6+,SfnEr/Sfn+
Genetic Background: involves: 129S1/Sv * 129X1/SvJ * C57BL/6

 MP:0002111 abnormal tail morphology "abnormal development of the tail resulting in structural abnormality" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Epas1tm1Fong/Epas1tm1Fong
Genetic Background: involves: 129S1/Sv * 129X1/SvJ

 MP:0002114 abnormal axial skeleton morphology "abnormal development of vertebral, spinal or sternal bones resulting in morphological abnormality" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Tectatm2Gpr/Tecta+
Genetic Background: involves: 129S/SvEv * C57BL/6J

 MP:0002144 abnormal B lymphocyte development "atypical production of or inability to produce mature B cells, and/or accumulation of B cell precursors" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Fasltm1.1Cgm/Fasltm1.1Cgm
Genetic Background: involves: 129S2/SvPas * C57BL/6 * C57BL/6N

 MP:0002234 abnormal pharynx morphology "structural anomaly in the passage between the mouth and the posterior nares and the larynx and esophagus" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
Show

Allelic Composition: Tectatm2Gpr/Tecta+
Genetic Background: involves: 129S/SvEv * C57BL/6J

 MP:0002237 abnormal nasal cavity morphology "any structural anomaly of the portion of the respiratory tract that extends from the nares to the pharynx; the nasal cavity is lined with ciliated mucosa" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator, MeSH:National Library of Medicine - Medical Subject Headings , 2003]
Show

Allelic Composition: Tectatm2Gpr/Tecta+
Genetic Background: involves: 129S/SvEv * C57BL/6J

 MP:0002251 abnormal nasopharynx morphology "structural anomaly of the section of the pharynx that lies above the soft palate" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
Show

Allelic Composition: Tectatm2Gpr/Tecta+
Genetic Background: involves: 129S/SvEv * C57BL/6J

 MP:0002418 increased susceptibility to viral infection "greater likelihood that an organism will develop ill effects from a viral infection or from components of or toxins produced by a virus" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
Show

Allelic Composition: Fasltm1.1Cgm/Fasltm1.1Cgm
Genetic Background: involves: 129S2/SvPas * C57BL/6 * C57BL/6N

 MP:0002543 brachyphalangia "abnormally short phalanges" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8]
Show

Allelic Composition: Tectatm2Gpr/Tecta+
Genetic Background: involves: 129S/SvEv * C57BL/6J

 MP:0002656 abnormal keratinocyte differentiation "developmental anomaly of the cells of the epidermis that produce keratin in the process of differentiating into the dead and fully keratinized cells of the stratum corneum " [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
Show

Allelic Composition: SfnEr/SfnEr
Genetic Background: B6CBACa Aw-J/A-SfnEr/J

 MP:0002796 impaired skin barrier function "impaired ability of the skin to regulate water loss; frequently leads to dehydration" [J:56641]
Show

Allelic Composition: Kdf1shd/Kdf1tm1a(EUCOMM)Wtsi
Genetic Background: involves: C3HeB/FeJ * C57BL/6J * C57BL/6N

Allelic Composition: Kdf1shd/Kdf1+,SfnEr/Sfn+
Genetic Background: involves: C3HeB/FeJ * C57BL/6J

 MP:0003130 anal atresia "absence of a connection between the anal pit and the rectum" [smb:Susan M. Bello, Mouse Genome Informatics Curator, J:91491]
Show

Allelic Composition: Tectatm2Gpr/Tecta+
Genetic Background: involves: 129S/SvEv * C57BL/6J

 MP:0003160 abnormal esophageal development "aberrant formation of the part of the digestive canal through which food passes from the pharynx to the stomach" [smb:Susan M Bello, Mouse Genome Informatics Curator]
Show

Allelic Composition: Irf6tm1Mjd/Irf6+,SfnEr/Sfn+
Genetic Background: involves: 129S1/Sv * 129X1/SvJ * C57BL/6

 MP:0003315 abnormal perineum morphology "malformation in the area between the genital organs and the anus that lies beneath the pelvic diaphragm" [ncbi:Matthew Mailman, NCBI request, Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8]
Show

Allelic Composition: Tectatm2Gpr/Tecta+
Genetic Background: involves: 129S/SvEv * C57BL/6J

 MP:0003385 abnormal body wall "malformation in the external portion of an animal body comprised of ectoderm and mesoderm layers that encloses the body cavity " [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Irf6tm1Mjd/Irf6+,SfnEr/Sfn+
Genetic Background: involves: 129S1/Sv * 129X1/SvJ * C57BL/6

 MP:0003566 abnormal cell adhesion "altered ability of a cell to adhere to another cell or to a non-cellular component of the environment" [monikat:Monika Tomczuk, Mouse Genome Informatics Curator]
Show

Allelic Composition: Galctwi/Galctwi,Il6tm1Kopf/Il6tm1Kopf
Genetic Background: involves: 129S2/SvPas * C57BL/6J * CE/J

 MP:0003671 abnormal eyelid opening 
Show

Allelic Composition: SfnEr/SfnEr
Genetic Background: involves: C57BL/6By

 MP:0003775 thin lip "lips having a reduced amount of soft tissue" [ncbi:Matthew Mailman, NCBI request]
Show

Allelic Composition: Tectatm2Gpr/Tecta+
Genetic Background: involves: 129S/SvEv * C57BL/6J

 MP:0003935 abnormal craniofacial development "anomaly in the process of forming the face and/or cranium" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: SfnEr/SfnEr
Genetic Background: involves: C57BL/6By

 MP:0004174 abnormal spine curvature "deviation from the typical S-shape of the spine" [smb:Susan M Bello, Mouse Genome Informatics Curator]
Show

Allelic Composition: Tectatm2Gpr/Tecta+
Genetic Background: involves: 129S/SvEv * C57BL/6J

 MP:0004207 squamous cell carcinoma "a carcinoma that arises from stratified squamous epithelium that occurs in sites where glandular or columnar epithelium is normally present, such as the skin, esophagus, lungs and cervix" [MGI:rbabiuk "Randall Babiuk, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Tectatm2Gpr/Tecta+
Genetic Background: involves: 129S/SvEv * C57BL/6J

 MP:0004575 small limb buds "reduced size of the mesenchymal outgrowth on the lateral trunk of the embryo that develops into the limbs" [MESH:National Library of Medicine_Medical Subject Headings]
Show

Allelic Composition: SfnEr/SfnEr
Genetic Background: involves: C57BL/6By

 MP:0004576 abnormal foot plate morphology "any structural anomaly of the distal elements of the developing limb of vertebrates that will give rise to the pedal appendages (e.g. hand, foot, paw)" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: SfnEr/SfnEr
Genetic Background: involves: C57BL/6By

 MP:0005017 decreased B cell number "fewer than normal B cell numbers" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
Show

Allelic Composition: Fasltm1.1Cgm/Fasltm1.1Cgm
Genetic Background: involves: 129S2/SvPas * C57BL/6 * C57BL/6N

 MP:0005114 premature hair loss "release of fur at an earlier than expected time" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
Show

Allelic Composition: Tectatm2Gpr/Tecta+
Genetic Background: involves: 129S/SvEv * C57BL/6J

Allelic Composition: SfnEr/Sfn+
Genetic Background: B6CBACa Aw-J/A-SfnEr/J

 MP:0005154 increased B cell proliferation "greater than the normal response by B cells to grow and divide in response to stimuli " [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
Show

Allelic Composition: Fasltm1.1Cgm/Fasltm1.1Cgm
Genetic Background: involves: 129S2/SvPas * C57BL/6 * C57BL/6N

 MP:0005155 herniated intestine "protrusion of any portion of the intestine from its normal anatomical position" [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
Show

Allelic Composition: Tectatm2Gpr/Tecta+
Genetic Background: involves: 129S/SvEv * C57BL/6J

 MP:0005306 abnormal phalanx morphology "aberrant structure of any of the long bones of the digits" [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
Show

Allelic Composition: Tectatm2Gpr/Tecta+
Genetic Background: involves: 129S/SvEv * C57BL/6J

 MP:0005650 abnormal limb bud morphology "aberrant structure or development of any of the swellings on the trunk of the embryo that become limbs" [hdene:Howard Dene , Mouse Genome Informatics Curator, MeSH:National Library of Medicine - Medical Subject Headings , 2003, J:61460]
Show

Allelic Composition: SfnEr/SfnEr
Genetic Background: involves: C57BL/6By

 MP:0006033 abnormal external auditory canal "malformation of the canal that connects the outer and middle ear" [smb:Susan M Bello, Mouse Genome Informatics Curator, J:57313]
Show

Allelic Composition: Tectatm2Gpr/Tecta+
Genetic Background: involves: 129S/SvEv * C57BL/6J

 MP:0006279 abnormal limb development "anomaly in the formation of the limbs" [MGI:smb "Susan M. Bello, Mouse Genome Informatics Curator"]
Show

Allelic Composition: SfnEr/SfnEr
Genetic Background: involves: C57BL/6By

 MP:0008168 decreased B-1a cell number "reduced number of the B-1 B cell subset bearing the CD5 surface marker" [CL:0000820, PMID:11861604]
Show

Allelic Composition: Fasltm1.1Cgm/Fasltm1.1Cgm
Genetic Background: involves: 129S2/SvPas * C57BL/6 * C57BL/6N

 MP:0008174 decreased follicular B cell number "reduced number of resting mature B cells with distinct phenotypic characteristics (CD23-positive, CD21-positive) found typically in the B cell follicle region of the spleen and lymph nodes" [CL:0000843, ISBN:0781735149, MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Fasltm1.1Cgm/Fasltm1.1Cgm
Genetic Background: involves: 129S2/SvPas * C57BL/6 * C57BL/6N

 MP:0008182 decreased marginal zone B cell number "reduced number of CD23-negative, CD21-positive B cells of the marginal zone of the spleen expressing a B cell receptor usually reactive to bacterial cell wall components or senescent self components such as oxidized-LDL" [CL:0000845, ISBN:0781735149]
Show

Allelic Composition: Fasltm1.1Cgm/Fasltm1.1Cgm
Genetic Background: involves: 129S2/SvPas * C57BL/6 * C57BL/6N

 MP:0008234 absent spleen marginal zone "absence of the zone between the red and white pulp of the spleen containing numerous macrophages and lymphocytes, and a rich plexus of sinusoids supplied by white pulp arterioles carrying blood-borne antigens" [ISBN:0-683-40008-8 "Stedman s Medical Dictionary, 27th edition"]
Show

Allelic Composition: Fasltm1.1Cgm/Fasltm1.1Cgm
Genetic Background: involves: 129S2/SvPas * C57BL/6 * C57BL/6N

 MP:0008470 abnormal spleen B cell follicle morphology "any structural anomaly of the area of the white pulp where the affinity maturation of B cells and the generation of memory B cells and plasma cells occur" [PMID:17495967]
Show

Allelic Composition: Fasltm1.1Cgm/Fasltm1.1Cgm
Genetic Background: involves: 129S2/SvPas * C57BL/6 * C57BL/6N

 MP:0008782 increased B cell apoptosis "increase in the timing or the number of B cells undergoing programmed cell death" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Fasltm1.1Cgm/Fasltm1.1Cgm
Genetic Background: involves: 129S2/SvPas * C57BL/6 * C57BL/6N

 MP:0009263 abnormal eyelid fusion "anomaly in the process by which the upper and lower eyelids are joined during development" [MGI:smb "Susan M. Bello, Mouse Genome Informatics Curator"]
Show

Allelic Composition: SfnEr/SfnEr
Genetic Background: involves: C57BL/6By

 MP:0009474 thick epidermal spinous layer "increased thickness of the stratum spinosum; the polyhedral cell layer" [MGI:llw2 "Linda Washburn, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Irf6tm1Mjd/Irf6+,SfnEr/Sfn+
Genetic Background: involves: 129S1/Sv * 129X1/SvJ * C57BL/6

 MP:0009503 abnormal mammary gland duct morphology "any structural anomaly of the canals that lead from the lobes of the mammary gland to the tip of the nipple and are responsible for carrying milk toward the nipple in a lactating female" [ISBN:0-683-40008-8 "Stedman s Medical Dictionary, 27th edition", MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Galctwi/Galctwi,Il6tm1Kopf/Il6tm1Kopf
Genetic Background: involves: 129S2/SvPas * C57BL/6J * CE/J

 MP:0009504 abnormal mammary gland epithelium morphology "any structural anomaly of the epithelial layer of the luminal surfaces of the mammary gland" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Galctwi/Galctwi,Il6tm1Kopf/Il6tm1Kopf
Genetic Background: involves: 129S2/SvPas * C57BL/6J * CE/J

Allelic Composition: Sfntm1Mul/Sfntm1Mul,Tg(MMTV-cre)7Mul/0
Genetic Background: involves: 129S1/Sv * 129X1/SvJ * FVB/N

 MP:0009553 fused lips "an anomaly of the fleshy margins of the mouth resulting in the lips being joined together into one structure" [MGI:mberry "Melissa Berry, Genetics Resources Curator"]
Show

Allelic Composition: Tectatm2Gpr/Tecta+
Genetic Background: involves: 129S/SvEv * C57BL/6J

Allelic Composition: SfnEr/SfnEr
Genetic Background: involves: C57BL/6By

 MP:0009560 absent epidermis stratum granulosum "absence of the layer of flattened cells containing basophilic granules of keratohyalin and lying just above the stratum spinosum (spiny layer) of the epidermis" [ISBN:0-683-40008-8 "Stedman s Medical Dictionary, 27th edition"]
Show

Allelic Composition: Irf6tm1Mjd/Irf6+,SfnEr/Sfn+
Genetic Background: involves: 129S1/Sv * 129X1/SvJ * C57BL/6

Allelic Composition: SfnEr/SfnEr
Genetic Background: B6CBACa Aw-J/A-SfnEr/J

 MP:0009576 oral atresia "congenital blockage, fusion, or absence of the normal opening of the oral cavity" [MGI:anna "Anna V. Anagnostopoulos, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Tectatm2Gpr/Tecta+
Genetic Background: involves: 129S/SvEv * C57BL/6J

Allelic Composition: Kdf1shd/Kdf1+,SfnEr/Sfn+
Genetic Background: involves: C3HeB/FeJ * C57BL/6J

 MP:0009791 increased susceptibility to viral infection induced morbidity/mortality "increased likelihood that an organism will display the expected moribund state caused by a viral invasion or from components of or toxins produced by a virus" [MGI:smb "Susan M. Bello, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Fasltm1.1Cgm/Fasltm1.1Cgm
Genetic Background: involves: 129S2/SvPas * C57BL/6 * C57BL/6N

 MP:0009884 palatal shelf fusion with tongue or mandible "palatal shelves do not elevate during development and instead fuse with tongue tissues or with the mandible tissues" [PMID:16680722]
Show

Allelic Composition: Tectatm2Gpr/Tecta+
Genetic Background: involves: 129S/SvEv * C57BL/6J

 MP:0009890 cleft secondary palate "congenital fissure of the tissues normally uniting to form the secondary palate" [PMID:16680722]
Show

Allelic Composition: Tectatm2Gpr/Tecta+
Genetic Background: involves: 129S/SvEv * C57BL/6J

 MP:0011084 partial lethality at weaning "the appearance of lower than Mendelian ratios of organisms of a given genotype due to death of some, but not all of the organisms at weaning age" [MGI:csmith]
Show

Allelic Composition: Tectatm2Gpr/Tecta+
Genetic Background: involves: 129S/SvEv * C57BL/6J

 MP:0011087 complete neonatal lethality "death of all organisms of a given genotype in a population within the neonatal period after birth (Mus: P0)" [MGI:csmith]
Show

Allelic Composition: Tectatm2Gpr/Tecta+
Genetic Background: involves: 129S/SvEv * C57BL/6J

 MP:0011089 complete perinatal lethality "death of all organisms of a given genotype in a population within the perinatal period (Mus: E18.5 through postnatal day 1)" [MGI:csmith]
Show

Allelic Composition: SfnEr/SfnEr
Genetic Background: B6CBACa Aw-J/A-SfnEr/J

 MP:0011110 partial preweaning lethality "the appearance of lower than Mendelian ratios of organisms of a given genotype due to death of some, but not all of the organisms between fertilization and weaning age (Mus: approximately 3-4 weeks of age)" [MGI:csmith]
Show

Allelic Composition: Kdf1shd/Kdf1+,SfnEr/Sfn+
Genetic Background: involves: C3HeB/FeJ * C57BL/6J

 MP:0012175 flat face "the appearance of a flattened surface outline or contour of a normally rounded face of an organism" [MGI:anna]
Show

Allelic Composition: Tectatm2Gpr/Tecta+
Genetic Background: involves: 129S/SvEv * C57BL/6J

 MP:0013789 small external nares "decreased size of the anterior openings to the nasal cavity" [MGI:Anna]
Show

Allelic Composition: Tectatm2Gpr/Tecta+
Genetic Background: involves: 129S/SvEv * C57BL/6J

 MP:0013818 abnormal oral cavity morphology "any structural anomaly of the anatomical cavity at the start of the digestive tract that is enclosed by the mouth" [UBERON:0000167]
Show

Allelic Composition: Tectatm2Gpr/Tecta+
Genetic Background: involves: 129S/SvEv * C57BL/6J

 MP:0030179 abnormal oral epithelium morphology "any structural anomaly of the stratified squamous epithelium that forms part of the oral mucosa and lines the inner aspect of the oral cavity; depending on the mouth region, the epithelium may be non-keratinized or keratinized; non-keratinized squamous epithelium covers the soft palate, inner lips, inner cheeks, and the floor of the mouth, and ventral surface of the tongue; keratinized squamous epithelium is present in the attached gingiva and hard palate as well as areas of the dorsal surface of the tongue" [https://en.wikipedia.org/wiki/Oral_mucosa]
Show

Allelic Composition: SfnEr/SfnEr
Genetic Background: B6CBACa Aw-J/A-SfnEr/J

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSMUSG00000003873 Bax / Q07813 / Apoptosis regulator BAX / Q07812* / BCL2 associated X, apoptosis regulator*  / complex / reaction
 ENSMUSG00000047281 Sfn / O70456 / stratifin / P31947*  / reaction / complex
 ENSMUSG00000041431 Ccnb1 / P24860 / G2/mitotic-specific cyclin-B1 / P14635* / cyclin B1*  / complex / reaction
 ENSMUSG00000019942 Cdk1 / P11440 / Cyclin-dependent kinase 1 / P06493*  / reaction / complex






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   


© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr